RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 STK40Q8N2I9 435 aa10.27□□□□□ -0.77
HDAC3-214ENST00000495485 RYBPQ8N488 228 aaPredicted RBP10.27□□□□□ -0.77
HDAC3-214ENST00000495485 ARMC2Q8NEN0 867 aa10.27□□□□□ -0.77
HDAC3-214ENST00000495485 LPCAT1Q8NF37 534 aa10.27□□□□□ -0.77
HDAC3-214ENST00000495485 OR2AP1Q8NGE2 309 aa10.27□□□□□ -0.77
HDAC3-214ENST00000495485 OR4L1Q8NH43 312 aa10.27□□□□□ -0.77
HDAC3-214ENST00000495485 KCNV2Q8TDN2 545 aa10.27□□□□□ -0.77
HDAC3-214ENST00000495485 PDCD6IPQ8WUM4 868 aaKnown RBP10.27□□□□□ -0.77
HDAC3-214ENST00000495485 CCDC126Q96EE4 140 aa10.27□□□□□ -0.77
HDAC3-214ENST00000495485 ASIC4Q96FT7 647 aa10.27□□□□□ -0.77
HDAC3-214ENST00000495485 MYO19Q96H55 970 aa10.27□□□□□ -0.77
HDAC3-214ENST00000495485 ZNF778Q96MU6 729 aa10.27□□□□□ -0.77
HDAC3-214ENST00000495485 LRRC3BQ96PB8 259 aa10.27□□□□□ -0.77
HDAC3-214ENST00000495485 SIKE1Q9BRV8 207 aa10.27□□□□□ -0.77
HDAC3-214ENST00000495485 TRIM55Q9BYV6 548 aa10.27□□□□□ -0.77
HDAC3-214ENST00000495485 CPEB1Q9BZB8 566 aaKnown RBP10.27□□□□□ -0.77
HDAC3-214ENST00000495485 SMG9Q9H0W8 520 aaKnown RBP10.27□□□□□ -0.77
HDAC3-214ENST00000495485 KCNH6Q9H252 994 aa10.27□□□□□ -0.77
HDAC3-214ENST00000495485 KDM4CQ9H3R0 1056 aa10.27□□□□□ -0.77
HDAC3-214ENST00000495485 PCDHGC4Q9Y5F7 938 aa10.27□□□□□ -0.77
HDAC3-214ENST00000495485 COMMD10Q9Y6G5 202 aa10.27□□□□□ -0.77
HDAC3-214ENST00000495485 USH1CQ9Y6N9 552 aa10.27□□□□□ -0.77
HDAC3-214ENST00000495485 KIAA1549LQ6ZVL6 1849 aa10.26□□□□□ -0.77
HDAC3-214ENST00000495485 HMX2A2RU54 273 aa10.26□□□□□ -0.77
HDAC3-214ENST00000495485 SPECC1L-ADORA2AF8WAN1 911 aa10.26□□□□□ -0.77
HDAC3-214ENST00000495485 NPC1O15118 1278 aa10.26□□□□□ -0.77
HDAC3-214ENST00000495485 NARSO43776 548 aaKnown RBP10.26□□□□□ -0.77
HDAC3-214ENST00000495485 PLIN3O60664 434 aa10.26□□□□□ -0.77
HDAC3-214ENST00000495485 NDUFS3O75489 264 aa10.26□□□□□ -0.77
HDAC3-214ENST00000495485 CD160O95971 181 aa10.26□□□□□ -0.77
HDAC3-214ENST00000495485 C2P06681 752 aa10.26□□□□□ -0.77
HDAC3-214ENST00000495485 BPGMP07738 259 aa10.26□□□□□ -0.77
HDAC3-214ENST00000495485 ADH5P11766 374 aa10.26□□□□□ -0.77
HDAC3-214ENST00000495485 CPA3P15088 417 aa10.26□□□□□ -0.77
HDAC3-214ENST00000495485 PSMA3P25788 255 aa10.26□□□□□ -0.77
HDAC3-214ENST00000495485 FOXN2P32314 431 aa10.26□□□□□ -0.77
HDAC3-214ENST00000495485 CTHP32929 405 aa10.26□□□□□ -0.77
HDAC3-214ENST00000495485 GJA4P35212 333 aa10.26□□□□□ -0.77
HDAC3-214ENST00000495485 SLC1A2P43004 574 aa10.26□□□□□ -0.77
HDAC3-214ENST00000495485 RPS9P46781 194 aaKnown RBP10.26□□□□□ -0.77
HDAC3-214ENST00000495485 TTPAP49638 278 aa10.26□□□□□ -0.77
HDAC3-214ENST00000495485 VASPP50552 380 aaPredicted RBP10.26□□□□□ -0.77
HDAC3-214ENST00000495485 ST8SIA6P61647 398 aa10.26□□□□□ -0.77
HDAC3-214ENST00000495485 CTBP1Q13363 440 aa10.26□□□□□ -0.77
HDAC3-214ENST00000495485 MSLNQ13421 630 aaPredicted RBP10.26□□□□□ -0.77
HDAC3-214ENST00000495485 DHCR24Q15392 516 aa10.26□□□□□ -0.77
HDAC3-214ENST00000495485 ZKSCAN8Q15776 578 aaPredicted RBP10.26□□□□□ -0.77
HDAC3-214ENST00000495485 ACCSLQ4AC99 568 aa10.26□□□□□ -0.77
HDAC3-214ENST00000495485 TMEM31Q5JXX7 168 aa10.26□□□□□ -0.77
HDAC3-214ENST00000495485 LYPLAL1Q5VWZ2 237 aa10.26□□□□□ -0.77
HDAC3-214ENST00000495485 ZDHHC20Q5W0Z9 365 aa10.26□□□□□ -0.77
HDAC3-214ENST00000495485 UGT3A1Q6NUS8 523 aa10.26□□□□□ -0.77
HDAC3-214ENST00000495485 CERS6Q6ZMG9 384 aa10.26□□□□□ -0.77
HDAC3-214ENST00000495485 MAMSTRQ6ZN01 415 aa10.26□□□□□ -0.77
HDAC3-214ENST00000495485 PTAR1Q7Z6K3 402 aaPredicted RBP10.26□□□□□ -0.77
HDAC3-214ENST00000495485 CRLF3Q8IUI8 442 aa10.26□□□□□ -0.77
HDAC3-214ENST00000495485 CILP2Q8IUL8 1156 aa10.26□□□□□ -0.77
HDAC3-214ENST00000495485 APCDD1Q8J025 514 aa10.26□□□□□ -0.77
HDAC3-214ENST00000495485 GPATCH11Q8N954 259 aa10.26□□□□□ -0.77
HDAC3-214ENST00000495485 OR13J1Q8NGT2 312 aa10.26□□□□□ -0.77
HDAC3-214ENST00000495485 FAM3CQ92520 227 aa10.26□□□□□ -0.77
HDAC3-214ENST00000495485 BHMTQ93088 406 aa10.26□□□□□ -0.77
HDAC3-214ENST00000495485 ATXN7L3BQ96GX2 97 aa10.26□□□□□ -0.77
HDAC3-214ENST00000495485 CDKN2AIPNLQ96HQ2 116 aa10.26□□□□□ -0.77
HDAC3-214ENST00000495485 SCYL1Q96KG9 808 aa10.26□□□□□ -0.77
HDAC3-214ENST00000495485 EXOC2Q96KP1 924 aa10.26□□□□□ -0.77
HDAC3-214ENST00000495485 ZNF641Q96N77 438 aaPredicted RBP10.26□□□□□ -0.77
HDAC3-214ENST00000495485 GPR63Q9BZJ6 419 aa10.26□□□□□ -0.77
HDAC3-214ENST00000495485 EBF3Q9H4W6 596 aa10.26□□□□□ -0.77
HDAC3-214ENST00000495485 NMRAL1Q9HBL8 299 aa10.26□□□□□ -0.77
HDAC3-214ENST00000495485 POPDC3Q9HBV1 291 aa10.26□□□□□ -0.77
HDAC3-214ENST00000495485 HPS4Q9NQG7 708 aa10.26□□□□□ -0.77
HDAC3-214ENST00000495485 THAP1Q9NVV9 213 aa10.26□□□□□ -0.77
HDAC3-214ENST00000495485 PLK2Q9NYY3 685 aa10.26□□□□□ -0.77
HDAC3-214ENST00000495485 IL1RAPL1Q9NZN1 696 aa10.26□□□□□ -0.77
HDAC3-214ENST00000495485 SLC2A6Q9UGQ3 507 aa10.26□□□□□ -0.77
HDAC3-214ENST00000495485 APPL1Q9UKG1 709 aa10.26□□□□□ -0.77
HDAC3-214ENST00000495485 HS3ST2Q9Y278 367 aa10.26□□□□□ -0.77
HDAC3-214ENST00000495485 FCF1Q9Y324 198 aaKnown RBP10.26□□□□□ -0.77
HDAC3-214ENST00000495485 SLC30A1Q9Y6M5 507 aa10.26□□□□□ -0.77
HDAC3-214ENST00000495485 ATG2BQ96BY7 2078 aa10.26□□□□□ -0.77
HDAC3-214ENST00000495485 MYLKQ15746 1914 aa10.25□□□□□ -0.77
HDAC3-214ENST00000495485 CCDC189A1A4V9 331 aa10.25□□□□□ -0.77
HDAC3-214ENST00000495485 TTC24A2A3L6 582 aaPredicted RBP10.25□□□□□ -0.77
HDAC3-214ENST00000495485 GOLGA8TH3BQL2 631 aa10.25□□□□□ -0.77
HDAC3-214ENST00000495485 H7C0S8 307 aa10.25□□□□□ -0.77
HDAC3-214ENST00000495485 KLHL2O95198 593 aa10.25□□□□□ -0.77
HDAC3-214ENST00000495485 PGLSO95336 258 aa10.25□□□□□ -0.77
HDAC3-214ENST00000495485 GOT2P00505 430 aaKnown RBP10.25□□□□□ -0.77
HDAC3-214ENST00000495485 CYP17A1P05093 508 aa10.25□□□□□ -0.77
HDAC3-214ENST00000495485 PYGLP06737 847 aa10.25□□□□□ -0.77
HDAC3-214ENST00000495485 SRPRAP08240 638 aaKnown RBP10.25□□□□□ -0.77
HDAC3-214ENST00000495485 RBP1P09455 135 aa10.25□□□□□ -0.77
HDAC3-214ENST00000495485 MYL2P10916 166 aa10.25□□□□□ -0.77
HDAC3-214ENST00000495485 AOC1P19801 751 aa10.25□□□□□ -0.77
HDAC3-214ENST00000495485 SAT1P21673 171 aa10.25□□□□□ -0.77
HDAC3-214ENST00000495485 HK2P52789 917 aa10.25□□□□□ -0.77
HDAC3-214ENST00000495485 GRSF1Q12849 480 aaKnown RBP eCLIP10.25□□□□□ -0.77
HDAC3-214ENST00000495485 IFT88Q13099 833 aa10.25□□□□□ -0.77
HDAC3-214ENST00000495485 CHI3L2Q15782 390 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms