RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 NFKBIAP25963 317 aa11.11□□□□□ -0.63
APTX-230ENST00000494649 ADRA1AP35348 466 aa11.11□□□□□ -0.63
APTX-230ENST00000494649 RPL26P61254 145 aaKnown RBP11.11□□□□□ -0.63
APTX-230ENST00000494649 DRICH1Q6PGQ1 229 aaPredicted RBP11.11□□□□□ -0.63
APTX-230ENST00000494649 RD3Q7Z3Z2 195 aa11.11□□□□□ -0.63
APTX-230ENST00000494649 GLT6D1Q7Z4J2 308 aa11.11□□□□□ -0.63
APTX-230ENST00000494649 GATAD2AQ86YP4 633 aa11.11□□□□□ -0.63
APTX-230ENST00000494649 MFSD2AQ8NA29 543 aa11.11□□□□□ -0.63
APTX-230ENST00000494649 OR52K1Q8NGK4 314 aa11.11□□□□□ -0.63
APTX-230ENST00000494649 AP2M1Q96CW1 435 aa11.11□□□□□ -0.63
APTX-230ENST00000494649 DTD2Q96FN9 168 aa11.11□□□□□ -0.63
APTX-230ENST00000494649 RIOK2Q9BVS4 552 aaKnown RBP11.11□□□□□ -0.63
APTX-230ENST00000494649 C1QTNF7Q9BXJ2 289 aa11.11□□□□□ -0.63
APTX-230ENST00000494649 PNMA8BQ9ULN7 279 aaPredicted RBP11.11□□□□□ -0.63
APTX-230ENST00000494649 RPL26L1Q9UNX3 145 aaKnown RBP11.11□□□□□ -0.63
APTX-230ENST00000494649 DRG1Q9Y295 367 aaKnown RBP11.11□□□□□ -0.63
APTX-230ENST00000494649 CACNA1EQ15878 2313 aa11.11□□□□□ -0.63
APTX-230ENST00000494649 TCRBV7S3A2A0A539 114 aa11.1□□□□□ -0.63
APTX-230ENST00000494649 CES2O00748 559 aa11.1□□□□□ -0.63
APTX-230ENST00000494649 LRP3O75074 770 aa11.1□□□□□ -0.63
APTX-230ENST00000494649 KRT14P02533 472 aa11.1□□□□□ -0.63
APTX-230ENST00000494649 SYPP08247 313 aa11.1□□□□□ -0.63
APTX-230ENST00000494649 DPP6P42658 865 aa11.1□□□□□ -0.63
APTX-230ENST00000494649 STC1P52823 247 aa11.1□□□□□ -0.63
APTX-230ENST00000494649 THOP1P52888 689 aa11.1□□□□□ -0.63
APTX-230ENST00000494649 NXPH1P58417 271 aa11.1□□□□□ -0.63
APTX-230ENST00000494649 TMPRSS15P98073 1019 aa11.1□□□□□ -0.63
APTX-230ENST00000494649 GPS1Q13098 491 aa11.1□□□□□ -0.63
APTX-230ENST00000494649 POU6F1Q14863 301 aa11.1□□□□□ -0.63
APTX-230ENST00000494649 CCDC38Q502W7 563 aa11.1□□□□□ -0.63
APTX-230ENST00000494649 KCTD11Q693B1 232 aa11.1□□□□□ -0.63
APTX-230ENST00000494649 DOK6Q6PKX4 331 aa11.1□□□□□ -0.63
APTX-230ENST00000494649 RANBP10Q6VN20 620 aa11.1□□□□□ -0.63
APTX-230ENST00000494649 TECPR1Q7Z6L1 1165 aa11.1□□□□□ -0.63
APTX-230ENST00000494649 RABEPKQ7Z6M1 372 aa11.1□□□□□ -0.63
APTX-230ENST00000494649 ABI3BPQ7Z7G0 1075 aa11.1□□□□□ -0.63
APTX-230ENST00000494649 ATL2Q8NHH9 583 aa11.1□□□□□ -0.63
APTX-230ENST00000494649 CCHCR1Q8TD31 782 aa11.1□□□□□ -0.63
APTX-230ENST00000494649 MRPL40Q9NQ50 206 aaKnown RBP11.1□□□□□ -0.63
APTX-230ENST00000494649 GDF3Q9NR23 364 aa11.1□□□□□ -0.63
APTX-230ENST00000494649 HOMER3Q9NSC5 361 aa11.1□□□□□ -0.63
APTX-230ENST00000494649 DNAJC28Q9NX36 388 aa11.1□□□□□ -0.63
APTX-230ENST00000494649 PAK5Q9P286 719 aa11.1□□□□□ -0.63
APTX-230ENST00000494649 MOSPD1Q9UJG1 213 aa11.1□□□□□ -0.63
APTX-230ENST00000494649 PCDH15Q96QU1 1955 aa11.1□□□□□ -0.63
APTX-230ENST00000494649 URI1O94763 535 aaPredicted RBP11.1□□□□□ -0.63
APTX-230ENST00000494649 AP2A1O95782 977 aa11.1□□□□□ -0.63
APTX-230ENST00000494649 FGF1P05230 155 aa11.1□□□□□ -0.63
APTX-230ENST00000494649 ZNF30P17039 623 aa11.1□□□□□ -0.63
APTX-230ENST00000494649 HLA-DPA1P20036 260 aa11.1□□□□□ -0.63
APTX-230ENST00000494649 PAFAH1B1P43034 410 aa11.1□□□□□ -0.63
APTX-230ENST00000494649 CTSKP43235 329 aa11.1□□□□□ -0.63
APTX-230ENST00000494649 GPR1P46091 355 aa11.1□□□□□ -0.63
APTX-230ENST00000494649 C2orf54Q08AI8 447 aa11.1□□□□□ -0.63
APTX-230ENST00000494649 BNIP3Q12983 259 aa11.1□□□□□ -0.63
APTX-230ENST00000494649 SEPT6Q14141 434 aa11.1□□□□□ -0.63
APTX-230ENST00000494649 CYP1B1Q16678 543 aa11.1□□□□□ -0.63
APTX-230ENST00000494649 STPG1Q5TH74 334 aa11.1□□□□□ -0.63
APTX-230ENST00000494649 DENND5AQ6IQ26 1287 aa11.1□□□□□ -0.63
APTX-230ENST00000494649 KYAT3Q6YP21 454 aaKnown RBP11.1□□□□□ -0.63
APTX-230ENST00000494649 HEATR4Q86WZ0 1026 aa11.1□□□□□ -0.63
APTX-230ENST00000494649 RBFAQ8N0V3 343 aa11.1□□□□□ -0.63
APTX-230ENST00000494649 DNAAF3Q8N9W5 541 aa11.1□□□□□ -0.63
APTX-230ENST00000494649 GPR26Q8NDV2 337 aa11.1□□□□□ -0.63
APTX-230ENST00000494649 TSACCQ96A04 125 aaPredicted RBP11.1□□□□□ -0.63
APTX-230ENST00000494649 LYSMD1Q96S90 227 aa11.1□□□□□ -0.63
APTX-230ENST00000494649 TCEAL2Q9H3H9 227 aaPredicted RBP11.1□□□□□ -0.63
APTX-230ENST00000494649 MAGEE1Q9HCI5 957 aa11.1□□□□□ -0.63
APTX-230ENST00000494649 TMEM9BQ9NQ34 198 aa11.1□□□□□ -0.63
APTX-230ENST00000494649 KLF15Q9UIH9 416 aa11.1□□□□□ -0.63
APTX-230ENST00000494649 TP53BP1Q12888 1972 aaPredicted RBP11.09□□□□□ -0.63
APTX-230ENST00000494649 TMEM202A6NGA9 273 aa11.09□□□□□ -0.63
APTX-230ENST00000494649 GOLGA8MH3BSY2 632 aa11.09□□□□□ -0.63
APTX-230ENST00000494649 NUDT1P36639 197 aa11.09□□□□□ -0.63
APTX-230ENST00000494649 SPINT3P49223 89 aa11.09□□□□□ -0.63
APTX-230ENST00000494649 PFN3P60673 137 aa11.09□□□□□ -0.63
APTX-230ENST00000494649 CRADDP78560 199 aa11.09□□□□□ -0.63
APTX-230ENST00000494649 FZD2Q14332 565 aa11.09□□□□□ -0.63
APTX-230ENST00000494649 PPP1R7Q15435 360 aa11.09□□□□□ -0.63
APTX-230ENST00000494649 SMAD1Q15797 465 aaKnown RBP11.09□□□□□ -0.63
APTX-230ENST00000494649 SLC14A2Q15849 920 aa11.09□□□□□ -0.63
APTX-230ENST00000494649 HS1BP3Q53T59 392 aa11.09□□□□□ -0.63
APTX-230ENST00000494649 ZNF648Q5T619 568 aaPredicted RBP11.09□□□□□ -0.63
APTX-230ENST00000494649 PNCKQ6P2M8 343 aa11.09□□□□□ -0.63
APTX-230ENST00000494649 ENPP7Q6UWV6 458 aa11.09□□□□□ -0.63
APTX-230ENST00000494649 PPP1R21Q6ZMI0 780 aa11.09□□□□□ -0.63
APTX-230ENST00000494649 CBARPQ8N350 705 aaPredicted RBP11.09□□□□□ -0.63
APTX-230ENST00000494649 DENND6BQ8NEG7 585 aa11.09□□□□□ -0.63
APTX-230ENST00000494649 NAT14Q8WUY8 206 aa11.09□□□□□ -0.63
APTX-230ENST00000494649 PTCD2Q8WV60 388 aaKnown RBP11.09□□□□□ -0.63
APTX-230ENST00000494649 SKA1Q96BD8 255 aa11.09□□□□□ -0.63
APTX-230ENST00000494649 CAMK1GQ96NX5 476 aa11.09□□□□□ -0.63
APTX-230ENST00000494649 APOOQ9BUR5 198 aa11.09□□□□□ -0.63
APTX-230ENST00000494649 SPATA16Q9BXB7 569 aa11.09□□□□□ -0.63
APTX-230ENST00000494649 LRRC40Q9H9A6 602 aa11.09□□□□□ -0.63
APTX-230ENST00000494649 PKD2L2Q9NZM6 624 aa11.09□□□□□ -0.63
APTX-230ENST00000494649 TPX2Q9ULW0 747 aaKnown RBP11.09□□□□□ -0.63
APTX-230ENST00000494649 HS3ST3A1Q9Y663 406 aa11.09□□□□□ -0.63
APTX-230ENST00000494649 CEP250Q9BV73 2442 aa11.09□□□□□ -0.63
APTX-230ENST00000494649 TDRD6O60522 2096 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms