RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 WDFY4Q6ZS81 3184 aa14.53□□□□□ -0.08
BRCA1-223ENST00000494123 ATXN2Q99700 1313 aaKnown RBP14.53□□□□□ -0.08
BRCA1-223ENST00000494123 MUC6Q6W4X9 2439 aa14.53□□□□□ -0.08
BRCA1-223ENST00000494123 ESYT3A0FGR9 886 aa14.53□□□□□ -0.08
BRCA1-223ENST00000494123 RGSL1A5PLK6 1076 aa14.53□□□□□ -0.08
BRCA1-223ENST00000494123 FPGTO14772 594 aa14.53□□□□□ -0.08
BRCA1-223ENST00000494123 SLU7O95391 586 aaKnown RBP14.53□□□□□ -0.08
BRCA1-223ENST00000494123 PCCBP05166 539 aa14.53□□□□□ -0.08
BRCA1-223ENST00000494123 RHOXF2BP0C7M4 288 aa14.53□□□□□ -0.08
BRCA1-223ENST00000494123 GNSP15586 552 aa14.53□□□□□ -0.08
BRCA1-223ENST00000494123 GM2AP17900 193 aa14.53□□□□□ -0.08
BRCA1-223ENST00000494123 ADRA1DP25100 572 aa14.53□□□□□ -0.08
BRCA1-223ENST00000494123 MSLNQ13421 630 aaPredicted RBP14.53□□□□□ -0.08
BRCA1-223ENST00000494123 STAT4Q14765 748 aa14.53□□□□□ -0.08
BRCA1-223ENST00000494123 IRF4Q15306 451 aa14.53□□□□□ -0.08
BRCA1-223ENST00000494123 PCID2Q5JVF3 399 aa14.53□□□□□ -0.08
BRCA1-223ENST00000494123 TEX35Q5T0J7 233 aa14.53□□□□□ -0.08
BRCA1-223ENST00000494123 CASC4Q6P4E1 433 aa14.53□□□□□ -0.08
BRCA1-223ENST00000494123 TECPR1Q7Z6L1 1165 aa14.53□□□□□ -0.08
BRCA1-223ENST00000494123 PDIK1LQ8N165 341 aa14.53□□□□□ -0.08
BRCA1-223ENST00000494123 ZCCHC9Q8N567 271 aaKnown RBP14.53□□□□□ -0.08
BRCA1-223ENST00000494123 LRRN4CLQ8ND94 238 aa14.53□□□□□ -0.08
BRCA1-223ENST00000494123 PIGKQ92643 395 aa14.53□□□□□ -0.08
BRCA1-223ENST00000494123 AP2M1Q96CW1 435 aa14.53□□□□□ -0.08
BRCA1-223ENST00000494123 EID2BQ96D98 161 aa14.53□□□□□ -0.08
BRCA1-223ENST00000494123 LOXL4Q96JB6 756 aa14.53□□□□□ -0.08
BRCA1-223ENST00000494123 LENG8Q96PV6 779 aaPredicted RBP14.53□□□□□ -0.08
BRCA1-223ENST00000494123 RANBP9Q96S59 729 aa14.53□□□□□ -0.08
BRCA1-223ENST00000494123 RHOXF2Q9BQY4 288 aa14.53□□□□□ -0.08
BRCA1-223ENST00000494123 SEMA4AQ9H3S1 761 aa14.53□□□□□ -0.08
BRCA1-223ENST00000494123 FAM83DQ9H4H8 585 aa14.53□□□□□ -0.08
BRCA1-223ENST00000494123 EPB41L5Q9HCM4 733 aa14.53□□□□□ -0.08
BRCA1-223ENST00000494123 SAMD15Q9P1V8 674 aa14.53□□□□□ -0.08
BRCA1-223ENST00000494123 SUSD2Q9UGT4 822 aa14.53□□□□□ -0.08
BRCA1-223ENST00000494123 FNDC3AQ9Y2H6 1198 aaKnown RBP14.53□□□□□ -0.08
BRCA1-223ENST00000494123 SCN8AQ9UQD0 1980 aa14.53□□□□□ -0.08
BRCA1-223ENST00000494123 CCDC78A2IDD5 438 aa14.52□□□□□ -0.08
BRCA1-223ENST00000494123 SDR42E2A6NKP2 422 aa14.52□□□□□ -0.08
BRCA1-223ENST00000494123 RAD51BO15315 384 aa14.52□□□□□ -0.08
BRCA1-223ENST00000494123 LDB2O43679 373 aa14.52□□□□□ -0.08
BRCA1-223ENST00000494123 PPFIA2O75334 1257 aa14.52□□□□□ -0.08
BRCA1-223ENST00000494123 NBL1P41271 181 aa14.52□□□□□ -0.08
BRCA1-223ENST00000494123 PLTPP55058 493 aa14.52□□□□□ -0.08
BRCA1-223ENST00000494123 ARL4CP56559 192 aa14.52□□□□□ -0.08
BRCA1-223ENST00000494123 CRADDP78560 199 aa14.52□□□□□ -0.08
BRCA1-223ENST00000494123 CAV1Q03135 178 aa14.52□□□□□ -0.08
BRCA1-223ENST00000494123 WSCD2Q2TBF2 565 aa14.52□□□□□ -0.08
BRCA1-223ENST00000494123 DNAJC21Q5F1R6 531 aaKnown RBP14.52□□□□□ -0.08
BRCA1-223ENST00000494123 ZDHHC20Q5W0Z9 365 aa14.52□□□□□ -0.08
BRCA1-223ENST00000494123 ALS2CLQ60I27 953 aa14.52□□□□□ -0.08
BRCA1-223ENST00000494123 LAIR1Q6GTX8 287 aa14.52□□□□□ -0.08
BRCA1-223ENST00000494123 RFLNAQ6ZTI6 216 aa14.52□□□□□ -0.08
BRCA1-223ENST00000494123 NLRP9Q7RTR0 991 aa14.52□□□□□ -0.08
BRCA1-223ENST00000494123 SYT12Q8IV01 421 aa14.52□□□□□ -0.08
BRCA1-223ENST00000494123 TP53I13Q8NBR0 393 aaPredicted RBP14.52□□□□□ -0.08
BRCA1-223ENST00000494123 OR4K2Q8NGD2 314 aa14.52□□□□□ -0.08
BRCA1-223ENST00000494123 CENPTQ96BT3 561 aa14.52□□□□□ -0.08
BRCA1-223ENST00000494123 SLC6A18Q96N87 628 aa14.52□□□□□ -0.08
BRCA1-223ENST00000494123 KLF6Q99612 283 aaPredicted RBP14.52□□□□□ -0.08
BRCA1-223ENST00000494123 CDH19Q9H159 772 aa14.52□□□□□ -0.08
BRCA1-223ENST00000494123 ABCG8Q9H221 673 aa14.52□□□□□ -0.08
BRCA1-223ENST00000494123 FAM114A2Q9NRY5 505 aa14.52□□□□□ -0.08
BRCA1-223ENST00000494123 SYBUQ9NX95 663 aa14.52□□□□□ -0.08
BRCA1-223ENST00000494123 GRHL1Q9NZI5 618 aa14.52□□□□□ -0.08
BRCA1-223ENST00000494123 IL17CQ9P0M4 197 aa14.52□□□□□ -0.08
BRCA1-223ENST00000494123 DMGDHQ9UI17 866 aaKnown RBP14.52□□□□□ -0.08
BRCA1-223ENST00000494123 TCAF1Q9Y4C2 921 aa14.52□□□□□ -0.08
BRCA1-223ENST00000494123 KCTD3Q9Y597 815 aa14.52□□□□□ -0.08
BRCA1-223ENST00000494123 SDK1Q7Z5N4 2213 aa14.52□□□□□ -0.09
BRCA1-223ENST00000494123 BCAT2O15382 392 aaPredicted RBP14.52□□□□□ -0.09
BRCA1-223ENST00000494123 BPIP17213 487 aa14.52□□□□□ -0.09
BRCA1-223ENST00000494123 SPAM1P38567 509 aa14.52□□□□□ -0.09
BRCA1-223ENST00000494123 HADHAP40939 763 aa14.52□□□□□ -0.09
BRCA1-223ENST00000494123 ZNF140P52738 457 aaPredicted RBP14.52□□□□□ -0.09
BRCA1-223ENST00000494123 DRG2P55039 364 aaKnown RBP14.52□□□□□ -0.09
BRCA1-223ENST00000494123 CLDN2P57739 230 aa14.52□□□□□ -0.09
BRCA1-223ENST00000494123 RACK1P63244 317 aaKnown RBP14.52□□□□□ -0.09
BRCA1-223ENST00000494123 TMPRSS15P98073 1019 aa14.52□□□□□ -0.09
BRCA1-223ENST00000494123 PTPRCAPQ14761 206 aa14.52□□□□□ -0.09
BRCA1-223ENST00000494123 HIF1AQ16665 826 aa14.52□□□□□ -0.09
BRCA1-223ENST00000494123 SKIDA1Q1XH10 827 aa14.52□□□□□ -0.09
BRCA1-223ENST00000494123 RAET1GQ6H3X3 334 aa14.52□□□□□ -0.09
BRCA1-223ENST00000494123 ZNF765Q7L2R6 523 aa14.52□□□□□ -0.09
BRCA1-223ENST00000494123 OR13C4Q8NGS5 318 aa14.52□□□□□ -0.09
BRCA1-223ENST00000494123 STYXQ8WUJ0 223 aa14.52□□□□□ -0.09
BRCA1-223ENST00000494123 SCAMP4Q969E2 229 aa14.52□□□□□ -0.09
BRCA1-223ENST00000494123 PLEKHG4BQ96PX9 1271 aa14.52□□□□□ -0.09
BRCA1-223ENST00000494123 ORAI3Q9BRQ5 295 aa14.52□□□□□ -0.09
BRCA1-223ENST00000494123 RIOK2Q9BVS4 552 aaKnown RBP14.52□□□□□ -0.09
BRCA1-223ENST00000494123 SPATA16Q9BXB7 569 aa14.52□□□□□ -0.09
BRCA1-223ENST00000494123 TM9SF3Q9HD45 589 aa14.52□□□□□ -0.09
BRCA1-223ENST00000494123 MBNL1Q9NR56 388 aaKnown RBP14.52□□□□□ -0.09
BRCA1-223ENST00000494123 GMEB2Q9UKD1 530 aa14.52□□□□□ -0.09
BRCA1-223ENST00000494123 PILRBQ9UKJ0 227 aa14.52□□□□□ -0.09
BRCA1-223ENST00000494123 CA5BQ9Y2D0 317 aa14.52□□□□□ -0.09
BRCA1-223ENST00000494123 HS3ST3A1Q9Y663 406 aa14.52□□□□□ -0.09
BRCA1-223ENST00000494123 MAD1L1Q9Y6D9 718 aa14.52□□□□□ -0.09
BRCA1-223ENST00000494123 A0A1B0GTW7 788 aa14.51□□□□□ -0.09
BRCA1-223ENST00000494123 MROH6A6NGR9 719 aa14.51□□□□□ -0.09
BRCA1-223ENST00000494123 A6NNZ2 444 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms