RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 KIAA1324Q6UXG2 1013 aaKnown RBP11.39□□□□□ -0.59
MCF2L-231ENST00000494043 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.39□□□□□ -0.59
MCF2L-231ENST00000494043 MARK2Q7KZI7 788 aaKnown RBP11.39□□□□□ -0.59
MCF2L-231ENST00000494043 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.39□□□□□ -0.59
MCF2L-231ENST00000494043 FLCNQ8NFG4 579 aa11.39□□□□□ -0.59
MCF2L-231ENST00000494043 EPS8L3Q8TE67 593 aaKnown RBP11.39□□□□□ -0.59
MCF2L-231ENST00000494043 CDKL2Q92772 493 aa11.39□□□□□ -0.59
MCF2L-231ENST00000494043 CDKN2AIPNLQ96HQ2 116 aa11.39□□□□□ -0.59
MCF2L-231ENST00000494043 RUFY1Q96T51 708 aa11.39□□□□□ -0.59
MCF2L-231ENST00000494043 OMDQ99983 421 aa11.39□□□□□ -0.59
MCF2L-231ENST00000494043 FAM167BQ9BTA0 163 aa11.39□□□□□ -0.59
MCF2L-231ENST00000494043 ACBD3Q9H3P7 528 aa11.39□□□□□ -0.59
MCF2L-231ENST00000494043 PPCSQ9HAB8 311 aa11.39□□□□□ -0.59
MCF2L-231ENST00000494043 FBXL12Q9NXK8 326 aa11.39□□□□□ -0.59
MCF2L-231ENST00000494043 ZFATQ9P243 1243 aa11.39□□□□□ -0.59
MCF2L-231ENST00000494043 VPS18Q9P253 973 aa11.39□□□□□ -0.59
MCF2L-231ENST00000494043 FETUBQ9UGM5 382 aa11.39□□□□□ -0.59
MCF2L-231ENST00000494043 FKBPLQ9UIM3 349 aa11.39□□□□□ -0.59
MCF2L-231ENST00000494043 FADS3Q9Y5Q0 445 aa11.39□□□□□ -0.59
MCF2L-231ENST00000494043 ATG2BQ96BY7 2078 aa11.39□□□□□ -0.59
MCF2L-231ENST00000494043 OR51F1A6NGY5 319 aa11.38□□□□□ -0.59
MCF2L-231ENST00000494043 GOLGA8KD6RF30 607 aa11.38□□□□□ -0.59
MCF2L-231ENST00000494043 POC1B-GALNT4F8VUJ3 575 aa11.38□□□□□ -0.59
MCF2L-231ENST00000494043 GOLGA8TH3BQL2 631 aa11.38□□□□□ -0.59
MCF2L-231ENST00000494043 H7C0S8 307 aa11.38□□□□□ -0.59
MCF2L-231ENST00000494043 AGPSO00116 658 aa11.38□□□□□ -0.59
MCF2L-231ENST00000494043 PSMD11O00231 422 aa11.38□□□□□ -0.59
MCF2L-231ENST00000494043 NEMP1O14524 444 aa11.38□□□□□ -0.59
MCF2L-231ENST00000494043 GOT2P00505 430 aaKnown RBP11.38□□□□□ -0.59
MCF2L-231ENST00000494043 ACADMP11310 421 aa11.38□□□□□ -0.59
MCF2L-231ENST00000494043 BPIP17213 487 aa11.38□□□□□ -0.59
MCF2L-231ENST00000494043 GABRG2P18507 467 aa11.38□□□□□ -0.59
MCF2L-231ENST00000494043 GCAP28676 217 aa11.38□□□□□ -0.59
MCF2L-231ENST00000494043 SPAM1P38567 509 aa11.38□□□□□ -0.59
MCF2L-231ENST00000494043 SPINT3P49223 89 aa11.38□□□□□ -0.59
MCF2L-231ENST00000494043 LIG3P49916 1009 aa11.38□□□□□ -0.59
MCF2L-231ENST00000494043 PTPN5P54829 565 aa11.38□□□□□ -0.59
MCF2L-231ENST00000494043 TAS2R38P59533 333 aa11.38□□□□□ -0.59
MCF2L-231ENST00000494043 KRT71Q3SY84 523 aa11.38□□□□□ -0.59
MCF2L-231ENST00000494043 HSP90AA5PQ58FG0 334 aa11.38□□□□□ -0.59
MCF2L-231ENST00000494043 CEP85LQ5SZL2 805 aa11.38□□□□□ -0.59
MCF2L-231ENST00000494043 TEDDM1Q5T9Z0 273 aa11.38□□□□□ -0.59
MCF2L-231ENST00000494043 ZDHHC20Q5W0Z9 365 aa11.38□□□□□ -0.59
MCF2L-231ENST00000494043 NEPROQ6NW34 567 aa11.38□□□□□ -0.59
MCF2L-231ENST00000494043 LIPIQ6XZB0 460 aa11.38□□□□□ -0.59
MCF2L-231ENST00000494043 MICALCLQ6ZW33 695 aa11.38□□□□□ -0.59
MCF2L-231ENST00000494043 USP30Q70CQ3 517 aa11.38□□□□□ -0.59
MCF2L-231ENST00000494043 HSD11B1LQ7Z5J1 315 aa11.38□□□□□ -0.59
MCF2L-231ENST00000494043 LRRC6Q86X45 466 aa11.38□□□□□ -0.59
MCF2L-231ENST00000494043 CNTN4Q8IWV2 1026 aa11.38□□□□□ -0.59
MCF2L-231ENST00000494043 CTAGE3PQ8IX95 158 aa11.38□□□□□ -0.59
MCF2L-231ENST00000494043 CBARPQ8N350 705 aaPredicted RBP11.38□□□□□ -0.59
MCF2L-231ENST00000494043 SPEM1Q8N4L4 309 aa11.38□□□□□ -0.59
MCF2L-231ENST00000494043 PPM1NQ8N819 430 aa11.38□□□□□ -0.59
MCF2L-231ENST00000494043 OR6P1Q8NGX9 317 aa11.38□□□□□ -0.59
MCF2L-231ENST00000494043 GABPB2Q8TAK5 448 aaPredicted RBP11.38□□□□□ -0.59
MCF2L-231ENST00000494043 CALML6Q8TD86 181 aa11.38□□□□□ -0.59
MCF2L-231ENST00000494043 GANCQ8TET4 914 aa11.38□□□□□ -0.59
MCF2L-231ENST00000494043 HMGB4Q8WW32 186 aa11.38□□□□□ -0.59
MCF2L-231ENST00000494043 SLC44A1Q8WWI5 657 aa11.38□□□□□ -0.59
MCF2L-231ENST00000494043 EDAQ92838 391 aa11.38□□□□□ -0.59
MCF2L-231ENST00000494043 UHRF1Q96T88 793 aaPredicted RBP11.38□□□□□ -0.59
MCF2L-231ENST00000494043 PAFAH2Q99487 392 aa11.38□□□□□ -0.59
MCF2L-231ENST00000494043 DHRS4Q9BTZ2 278 aa11.38□□□□□ -0.59
MCF2L-231ENST00000494043 WRAP53Q9BUR4 548 aaKnown RBP11.38□□□□□ -0.59
MCF2L-231ENST00000494043 ROPN1BQ9BZX4 212 aaPredicted RBP11.38□□□□□ -0.59
MCF2L-231ENST00000494043 SUDS3Q9H7L9 328 aaPredicted RBP11.38□□□□□ -0.59
MCF2L-231ENST00000494043 ROPN1Q9HAT0 212 aaPredicted RBP11.38□□□□□ -0.59
MCF2L-231ENST00000494043 RAD18Q9NS91 495 aa11.38□□□□□ -0.59
MCF2L-231ENST00000494043 IARS2Q9NSE4 1012 aaKnown RBP11.38□□□□□ -0.59
MCF2L-231ENST00000494043 C2orf42Q9NWW7 574 aa11.38□□□□□ -0.59
MCF2L-231ENST00000494043 PKD2L2Q9NZM6 624 aa11.38□□□□□ -0.59
MCF2L-231ENST00000494043 SLC17A6Q9P2U8 582 aa11.38□□□□□ -0.59
MCF2L-231ENST00000494043 NFKBIL1Q9UBC1 381 aaPredicted RBP11.38□□□□□ -0.59
MCF2L-231ENST00000494043 SLC24A2Q9UI40 661 aa11.38□□□□□ -0.59
MCF2L-231ENST00000494043 FZD4Q9ULV1 537 aa11.38□□□□□ -0.59
MCF2L-231ENST00000494043 SIT1Q9Y3P8 196 aa11.38□□□□□ -0.59
MCF2L-231ENST00000494043 SCN8AQ9UQD0 1980 aa11.37□□□□□ -0.59
MCF2L-231ENST00000494043 BDP1A6H8Y1 2624 aa11.37□□□□□ -0.59
MCF2L-231ENST00000494043 RGSL1A5PLK6 1076 aa11.37□□□□□ -0.59
MCF2L-231ENST00000494043 SMIM23A6NLE4 172 aa11.37□□□□□ -0.59
MCF2L-231ENST00000494043 GAPDHSO14556 408 aaPredicted RBP11.37□□□□□ -0.59
MCF2L-231ENST00000494043 RASGRF2O14827 1237 aa11.37□□□□□ -0.59
MCF2L-231ENST00000494043 DCXO43602 365 aa11.37□□□□□ -0.59
MCF2L-231ENST00000494043 TSPAN6O43657 245 aa11.37□□□□□ -0.59
MCF2L-231ENST00000494043 PLRG1O43660 514 aaKnown RBP11.37□□□□□ -0.59
MCF2L-231ENST00000494043 UGT1A9O60656 530 aa11.37□□□□□ -0.59
MCF2L-231ENST00000494043 CDH16O75309 829 aa11.37□□□□□ -0.59
MCF2L-231ENST00000494043 C6P13671 934 aa11.37□□□□□ -0.59
MCF2L-231ENST00000494043 GM2AP17900 193 aa11.37□□□□□ -0.59
MCF2L-231ENST00000494043 MC4RP32245 332 aa11.37□□□□□ -0.59
MCF2L-231ENST00000494043 FOXN2P32314 431 aa11.37□□□□□ -0.59
MCF2L-231ENST00000494043 ETV3P41162 512 aa11.37□□□□□ -0.59
MCF2L-231ENST00000494043 MSH2P43246 934 aa11.37□□□□□ -0.59
MCF2L-231ENST00000494043 SLCO1A2P46721 670 aa11.37□□□□□ -0.59
MCF2L-231ENST00000494043 DCDC1P59894 354 aa11.37□□□□□ -0.59
MCF2L-231ENST00000494043 XIAPP98170 497 aa11.37□□□□□ -0.59
MCF2L-231ENST00000494043 PEX6Q13608 980 aa11.37□□□□□ -0.59
MCF2L-231ENST00000494043 ACOX1Q15067 660 aa11.37□□□□□ -0.59
MCF2L-231ENST00000494043 RASA2Q15283 850 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms