RNA–Protein interactions for RNA: ENST00000493796.5

CD46-217, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-217ENST00000493796 GAGE1Q13065 139 aa3.79□□□□□ -1.8
CD46-217ENST00000493796 GAGE4Q13068 117 aa3.79□□□□□ -1.8
CD46-217ENST00000493796 SNTA1Q13424 505 aa3.79□□□□□ -1.8
CD46-217ENST00000493796 DHX8Q14562 1220 aaKnown RBP3.79□□□□□ -1.8
CD46-217ENST00000493796 TAF11Q15544 211 aa3.79□□□□□ -1.8
CD46-217ENST00000493796 SLC22A25Q6T423 547 aa3.79□□□□□ -1.8
CD46-217ENST00000493796 BRINP3Q76B58 766 aa3.79□□□□□ -1.8
CD46-217ENST00000493796 ZC3HC1Q86WB0 502 aaKnown RBP3.79□□□□□ -1.8
CD46-217ENST00000493796 C11orf65Q8NCR3 313 aa3.79□□□□□ -1.8
CD46-217ENST00000493796 NOC3LQ8WTT2 800 aaKnown RBP3.79□□□□□ -1.8
CD46-217ENST00000493796 MXRA8Q9BRK3 442 aa3.79□□□□□ -1.8
CD46-217ENST00000493796 NUF2Q9BZD4 464 aa3.79□□□□□ -1.8
CD46-217ENST00000493796 LUZP4Q9P127 313 aa3.79□□□□□ -1.8
CD46-217ENST00000493796 HCN3Q9P1Z3 774 aa3.79□□□□□ -1.8
CD46-217ENST00000493796 CTNNAL1Q9UBT7 734 aa3.79□□□□□ -1.8
CD46-217ENST00000493796 SLC25A10Q9UBX3 287 aaPredicted RBP3.79□□□□□ -1.8
CD46-217ENST00000493796 SLCO3A1Q9UIG8 710 aa3.79□□□□□ -1.8
CD46-217ENST00000493796 KCNG2Q9UJ96 466 aa3.79□□□□□ -1.8
CD46-217ENST00000493796 TCF20Q9UGU0 1960 aaKnown RBP3.79□□□□□ -1.8
CD46-217ENST00000493796 MAP2P11137 1827 aaKnown RBP3.79□□□□□ -1.8
CD46-217ENST00000493796 FAM135BQ49AJ0 1406 aa3.78□□□□□ -1.8
CD46-217ENST00000493796 ADGRL3Q9HAR2 1447 aa3.78□□□□□ -1.8
CD46-217ENST00000493796 SCN5AQ14524 2016 aa3.78□□□□□ -1.8
CD46-217ENST00000493796 LRP6O75581 1613 aa3.78□□□□□ -1.8
CD46-217ENST00000493796 CDC42BPGQ6DT37 1551 aa3.78□□□□□ -1.8
CD46-217ENST00000493796 hDV102S1A0JD36 115 aa3.78□□□□□ -1.8
CD46-217ENST00000493796 LDB3O75112 727 aa3.78□□□□□ -1.8
CD46-217ENST00000493796 MTA2O94776 668 aa3.78□□□□□ -1.8
CD46-217ENST00000493796 AFPP02771 609 aaKnown RBP3.78□□□□□ -1.8
CD46-217ENST00000493796 POLBP06746 335 aa3.78□□□□□ -1.8
CD46-217ENST00000493796 GALTP07902 379 aa3.78□□□□□ -1.8
CD46-217ENST00000493796 IFIT1P09914 478 aaKnown RBP3.78□□□□□ -1.8
CD46-217ENST00000493796 GPTP24298 496 aa3.78□□□□□ -1.8
CD46-217ENST00000493796 VAMP2P63027 116 aa3.78□□□□□ -1.8
CD46-217ENST00000493796 ECT2LQ008S8 904 aa3.78□□□□□ -1.8
CD46-217ENST00000493796 POU3F1Q03052 451 aaPredicted RBP3.78□□□□□ -1.8
CD46-217ENST00000493796 CALCRLQ16602 461 aa3.78□□□□□ -1.8
CD46-217ENST00000493796 NAA35Q5VZE5 725 aa3.78□□□□□ -1.8
CD46-217ENST00000493796 WBP2NLQ6ICG8 309 aa3.78□□□□□ -1.8
CD46-217ENST00000493796 LRRC8EQ6NSJ5 796 aa3.78□□□□□ -1.8
CD46-217ENST00000493796 TMEM81Q6P7N7 255 aa3.78□□□□□ -1.8
CD46-217ENST00000493796 Q6ZTC4 211 aa3.78□□□□□ -1.8
CD46-217ENST00000493796 CUZD1Q86UP6 607 aa3.78□□□□□ -1.8
CD46-217ENST00000493796 NOXA1Q86UR1 476 aa3.78□□□□□ -1.8
CD46-217ENST00000493796 SPATA3Q8NHX4 192 aa3.78□□□□□ -1.8
CD46-217ENST00000493796 MTBPQ96DY7 904 aa3.78□□□□□ -1.8
CD46-217ENST00000493796 BICD1Q96G01 975 aa3.78□□□□□ -1.8
CD46-217ENST00000493796 DOCK7Q96N67 2140 aa3.78□□□□□ -1.8
CD46-217ENST00000493796 SLITRK1Q96PX8 696 aa3.78□□□□□ -1.8
CD46-217ENST00000493796 LBHD1Q9BQE6 289 aaPredicted RBP3.78□□□□□ -1.8
CD46-217ENST00000493796 FUZQ9BT04 418 aa3.78□□□□□ -1.8
CD46-217ENST00000493796 RETREG1Q9H6L5 497 aa3.78□□□□□ -1.8
CD46-217ENST00000493796 CISD1Q9NZ45 108 aaKnown RBP3.78□□□□□ -1.8
CD46-217ENST00000493796 SLC9A2Q9UBY0 812 aa3.78□□□□□ -1.8
CD46-217ENST00000493796 HSPB7Q9UBY9 170 aa3.78□□□□□ -1.8
CD46-217ENST00000493796 MALT1Q9UDY8 824 aa3.78□□□□□ -1.8
CD46-217ENST00000493796 ICAM5Q9UMF0 924 aa3.78□□□□□ -1.8
CD46-217ENST00000493796 CPSF1Q10570 1443 aaKnown RBP3.78□□□□□ -1.8
CD46-217ENST00000493796 CCDC7Q96M83 1385 aa3.77□□□□□ -1.81
CD46-217ENST00000493796 PIK3R4Q99570 1358 aa3.77□□□□□ -1.81
CD46-217ENST00000493796 CENPJQ9HC77 1338 aaPredicted RBP3.77□□□□□ -1.81
CD46-217ENST00000493796 SAA2-SAA4A0A096LPE2 208 aa3.77□□□□□ -1.81
CD46-217ENST00000493796 MAGEA13PA6NCF6 341 aa3.77□□□□□ -1.81
CD46-217ENST00000493796 ZIC3O60481 467 aa3.77□□□□□ -1.81
CD46-217ENST00000493796 TACC1O75410 805 aa3.77□□□□□ -1.81
CD46-217ENST00000493796 ETFAP13804 333 aa3.77□□□□□ -1.81
CD46-217ENST00000493796 CD58P19256 250 aa3.77□□□□□ -1.81
CD46-217ENST00000493796 POU1F1P28069 291 aa3.77□□□□□ -1.81
CD46-217ENST00000493796 HNRNPH1P31943 449 aaKnown RBP3.77□□□□□ -1.81
CD46-217ENST00000493796 HSPA1LP34931 641 aa3.77□□□□□ -1.81
CD46-217ENST00000493796 EFNA5P52803 228 aa3.77□□□□□ -1.81
CD46-217ENST00000493796 ILF3Q12906 894 aaKnown RBP eCLIP3.77□□□□□ -1.81
CD46-217ENST00000493796 GRIK3Q13003 919 aa3.77□□□□□ -1.81
CD46-217ENST00000493796 ITGADQ13349 1161 aa3.77□□□□□ -1.81
CD46-217ENST00000493796 BIRC3Q13489 604 aa3.77□□□□□ -1.81
CD46-217ENST00000493796 VEPH1Q14D04 833 aa3.77□□□□□ -1.81
CD46-217ENST00000493796 EFNB3Q15768 340 aa3.77□□□□□ -1.81
CD46-217ENST00000493796 PPP6R3Q5H9R7 873 aaPredicted RBP3.77□□□□□ -1.81
CD46-217ENST00000493796 FAM76BQ5HYJ3 339 aa3.77□□□□□ -1.81
CD46-217ENST00000493796 C9orf50Q5SZB4 431 aa3.77□□□□□ -1.81
CD46-217ENST00000493796 ZCCHC10Q8TBK6 192 aa3.77□□□□□ -1.81
CD46-217ENST00000493796 USP13Q92995 863 aaPredicted RBP3.77□□□□□ -1.81
CD46-217ENST00000493796 FBXL8Q96CD0 374 aa3.77□□□□□ -1.81
CD46-217ENST00000493796 ZBTB10Q96DT7 871 aa3.77□□□□□ -1.81
CD46-217ENST00000493796 ZNF385AQ96PM9 386 aaKnown RBP3.77□□□□□ -1.81
CD46-217ENST00000493796 OR1F2PQ96R84 312 aa3.77□□□□□ -1.81
CD46-217ENST00000493796 PKP4Q99569 1192 aa3.77□□□□□ -1.81
CD46-217ENST00000493796 HEMGNQ9BXL5 484 aa3.77□□□□□ -1.81
CD46-217ENST00000493796 DDX4Q9NQI0 724 aaKnown RBP3.77□□□□□ -1.81
CD46-217ENST00000493796 C20orf141Q9NUB4 165 aa3.77□□□□□ -1.81
CD46-217ENST00000493796 RRN3Q9NYV6 651 aa3.77□□□□□ -1.81
CD46-217ENST00000493796 GGA3Q9NZ52 723 aa3.77□□□□□ -1.81
CD46-217ENST00000493796 CDC14AQ9UNH5 594 aa3.77□□□□□ -1.81
CD46-217ENST00000493796 PHLPP1O60346 1717 aa3.77□□□□□ -1.81
CD46-217ENST00000493796 ITSN1Q15811 1721 aa3.77□□□□□ -1.81
CD46-217ENST00000493796 ACEP12821 1306 aa3.76□□□□□ -1.81
CD46-217ENST00000493796 USP54Q70EL1 1684 aa3.76□□□□□ -1.81
CD46-217ENST00000493796 NDUFS7O75251 213 aa3.76□□□□□ -1.81
CD46-217ENST00000493796 DDNO94850 711 aaPredicted RBP3.76□□□□□ -1.81
CD46-217ENST00000493796 ZNF432O94892 652 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms