RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 GOLGA6DP0CG33 693 aa11.6□□□□□ -0.55
CTSA-209ENST00000493522 LHCGRP22888 699 aa11.6□□□□□ -0.55
CTSA-209ENST00000493522 CD38P28907 300 aa11.6□□□□□ -0.55
CTSA-209ENST00000493522 CASQ1P31415 396 aa11.6□□□□□ -0.55
CTSA-209ENST00000493522 HNF1BP35680 557 aa11.6□□□□□ -0.55
CTSA-209ENST00000493522 C21orf59P57076 290 aa11.6□□□□□ -0.55
CTSA-209ENST00000493522 ETF1P62495 437 aaKnown RBP11.6□□□□□ -0.55
CTSA-209ENST00000493522 STAT4Q14765 748 aa11.6□□□□□ -0.55
CTSA-209ENST00000493522 SUZ12Q15022 739 aaKnown RBP11.6□□□□□ -0.55
CTSA-209ENST00000493522 PTPRRQ15256 657 aa11.6□□□□□ -0.55
CTSA-209ENST00000493522 COL28A1Q2UY09 1125 aa11.6□□□□□ -0.55
CTSA-209ENST00000493522 HLA-BQ31612 363 aa11.6□□□□□ -0.55
CTSA-209ENST00000493522 PAPD7Q5XG87 772 aaKnown RBP11.6□□□□□ -0.55
CTSA-209ENST00000493522 LRRC66Q68CR7 880 aa11.6□□□□□ -0.55
CTSA-209ENST00000493522 DRICH1Q6PGQ1 229 aaPredicted RBP11.6□□□□□ -0.55
CTSA-209ENST00000493522 SYT10Q6XYQ8 523 aa11.6□□□□□ -0.55
CTSA-209ENST00000493522 LIPIQ6XZB0 460 aa11.6□□□□□ -0.55
CTSA-209ENST00000493522 GSTA5Q7RTV2 222 aa11.6□□□□□ -0.55
CTSA-209ENST00000493522 PTAR1Q7Z6K3 402 aaPredicted RBP11.6□□□□□ -0.55
CTSA-209ENST00000493522 SLCO6A1Q86UG4 719 aa11.6□□□□□ -0.55
CTSA-209ENST00000493522 PDZD3Q86UT5 571 aa11.6□□□□□ -0.55
CTSA-209ENST00000493522 SLC25A41Q8N5S1 370 aa11.6□□□□□ -0.55
CTSA-209ENST00000493522 DENND6BQ8NEG7 585 aa11.6□□□□□ -0.55
CTSA-209ENST00000493522 C1orf216Q8TAB5 229 aa11.6□□□□□ -0.55
CTSA-209ENST00000493522 MDM1Q8TC05 714 aa11.6□□□□□ -0.55
CTSA-209ENST00000493522 ACTRT1Q8TDG2 376 aa11.6□□□□□ -0.55
CTSA-209ENST00000493522 LRRC45Q96CN5 670 aa11.6□□□□□ -0.55
CTSA-209ENST00000493522 RTP4Q96DX8 246 aa11.6□□□□□ -0.55
CTSA-209ENST00000493522 SCRN2Q96FV2 425 aa11.6□□□□□ -0.55
CTSA-209ENST00000493522 MRGPRX2Q96LB1 330 aa11.6□□□□□ -0.55
CTSA-209ENST00000493522 GORASP1Q9BQQ3 440 aa11.6□□□□□ -0.55
CTSA-209ENST00000493522 C1QTNF2Q9BXJ5 285 aa11.6□□□□□ -0.55
CTSA-209ENST00000493522 IL21RQ9HBE5 538 aa11.6□□□□□ -0.55
CTSA-209ENST00000493522 GOLGA6AQ9NYA3 693 aa11.6□□□□□ -0.55
CTSA-209ENST00000493522 TTC7AQ9ULT0 858 aaPredicted RBP11.6□□□□□ -0.55
CTSA-209ENST00000493522 FNDC3AQ9Y2H6 1198 aaKnown RBP11.6□□□□□ -0.55
CTSA-209ENST00000493522 AAR2Q9Y312 384 aaKnown RBP11.6□□□□□ -0.55
CTSA-209ENST00000493522 KNL1Q8NG31 2342 aa11.59□□□□□ -0.55
CTSA-209ENST00000493522 A0A0U1RQS6 177 aa11.59□□□□□ -0.55
CTSA-209ENST00000493522 C1orf232A0A0U1RR37 186 aa11.59□□□□□ -0.55
CTSA-209ENST00000493522 A0A1B0GVT2 93 aa11.59□□□□□ -0.55
CTSA-209ENST00000493522 A6NNZ2 444 aa11.59□□□□□ -0.55
CTSA-209ENST00000493522 ANKRD66B4E2M5 251 aa11.59□□□□□ -0.55
CTSA-209ENST00000493522 FPGTO14772 594 aa11.59□□□□□ -0.55
CTSA-209ENST00000493522 WNT9AO14904 365 aa11.59□□□□□ -0.55
CTSA-209ENST00000493522 RAD51BO15315 384 aa11.59□□□□□ -0.55
CTSA-209ENST00000493522 PHF2O75151 1096 aa11.59□□□□□ -0.55
CTSA-209ENST00000493522 METTL18O95568 372 aa11.59□□□□□ -0.55
CTSA-209ENST00000493522 FGF1P05230 155 aa11.59□□□□□ -0.55
CTSA-209ENST00000493522 PIRTP0C851 137 aa11.59□□□□□ -0.55
CTSA-209ENST00000493522 ETS1P14921 441 aa11.59□□□□□ -0.55
CTSA-209ENST00000493522 ZNF30P17039 623 aa11.59□□□□□ -0.55
CTSA-209ENST00000493522 HLA-DPA1P20036 260 aa11.59□□□□□ -0.55
CTSA-209ENST00000493522 STIP1P31948 543 aaKnown RBP11.59□□□□□ -0.55
CTSA-209ENST00000493522 IGFALSP35858 605 aa11.59□□□□□ -0.55
CTSA-209ENST00000493522 CHRNA4P43681 627 aa11.59□□□□□ -0.55
CTSA-209ENST00000493522 KCNJ1P48048 391 aa11.59□□□□□ -0.55
CTSA-209ENST00000493522 CSNK1EP49674 416 aaKnown RBP11.59□□□□□ -0.55
CTSA-209ENST00000493522 CLDN2P57739 230 aa11.59□□□□□ -0.55
CTSA-209ENST00000493522 IRF4Q15306 451 aa11.59□□□□□ -0.55
CTSA-209ENST00000493522 SIRPB2Q5JXA9 342 aa11.59□□□□□ -0.55
CTSA-209ENST00000493522 GCNT7Q6ZNI0 430 aa11.59□□□□□ -0.55
CTSA-209ENST00000493522 TMPRSS7Q7RTY8 843 aa11.59□□□□□ -0.55
CTSA-209ENST00000493522 PRUNE1Q86TP1 453 aa11.59□□□□□ -0.55
CTSA-209ENST00000493522 GALNT15Q8N3T1 639 aa11.59□□□□□ -0.55
CTSA-209ENST00000493522 PIP4P2Q8N4L2 257 aa11.59□□□□□ -0.55
CTSA-209ENST00000493522 TMEM145Q8NBT3 493 aa11.59□□□□□ -0.55
CTSA-209ENST00000493522 BAHD1Q8TBE0 780 aaPredicted RBP11.59□□□□□ -0.55
CTSA-209ENST00000493522 RHBDD1Q8TEB9 315 aa11.59□□□□□ -0.55
CTSA-209ENST00000493522 ASB12Q8WXK4 309 aa11.59□□□□□ -0.55
CTSA-209ENST00000493522 MAGOHBQ96A72 148 aaKnown RBP11.59□□□□□ -0.55
CTSA-209ENST00000493522 NUS1Q96E22 293 aa11.59□□□□□ -0.55
CTSA-209ENST00000493522 APOL2Q9BQE5 337 aa11.59□□□□□ -0.55
CTSA-209ENST00000493522 DKK4Q9UBT3 224 aa11.59□□□□□ -0.55
CTSA-209ENST00000493522 PPIL1Q9Y3C6 166 aa11.59□□□□□ -0.55
CTSA-209ENST00000493522 ZNF711Q9Y462 761 aa11.59□□□□□ -0.55
CTSA-209ENST00000493522 ADAMTS20P59510 1910 aa11.58□□□□□ -0.55
CTSA-209ENST00000493522 E7EVH7 732 aa11.58□□□□□ -0.56
CTSA-209ENST00000493522 H0Y8X5 98 aa11.58□□□□□ -0.56
CTSA-209ENST00000493522 PSMD11O00231 422 aa11.58□□□□□ -0.56
CTSA-209ENST00000493522 USP12O75317 370 aa11.58□□□□□ -0.56
CTSA-209ENST00000493522 RECQL5O94762 991 aaPredicted RBP11.58□□□□□ -0.56
CTSA-209ENST00000493522 WNT1P04628 370 aa11.58□□□□□ -0.56
CTSA-209ENST00000493522 PCCBP05166 539 aa11.58□□□□□ -0.56
CTSA-209ENST00000493522 C1SP09871 688 aa11.58□□□□□ -0.56
CTSA-209ENST00000493522 ATXN1LP0C7T5 689 aaKnown RBP11.58□□□□□ -0.56
CTSA-209ENST00000493522 THEGLP0DJG4 465 aa11.58□□□□□ -0.56
CTSA-209ENST00000493522 FDFT1P37268 417 aa11.58□□□□□ -0.56
CTSA-209ENST00000493522 LMAN1P49257 510 aa11.58□□□□□ -0.56
CTSA-209ENST00000493522 OLIG2Q13516 323 aa11.58□□□□□ -0.56
CTSA-209ENST00000493522 SPARCL1Q14515 664 aa11.58□□□□□ -0.56
CTSA-209ENST00000493522 LRRC14Q15048 493 aa11.58□□□□□ -0.56
CTSA-209ENST00000493522 PARP6Q2NL67 630 aa11.58□□□□□ -0.56
CTSA-209ENST00000493522 TTC27Q6P3X3 843 aa11.58□□□□□ -0.56
CTSA-209ENST00000493522 CRTC1Q6UUV9 634 aa11.58□□□□□ -0.56
CTSA-209ENST00000493522 KYAT3Q6YP21 454 aaKnown RBP11.58□□□□□ -0.56
CTSA-209ENST00000493522 DBX2Q6ZNG2 339 aa11.58□□□□□ -0.56
CTSA-209ENST00000493522 NYAP1Q6ZVC0 841 aa11.58□□□□□ -0.56
CTSA-209ENST00000493522 LYSMD3Q7Z3D4 306 aa11.58□□□□□ -0.56
CTSA-209ENST00000493522 HSD11B1LQ7Z5J1 315 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms