RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 PAPOLAP51003 745 aaKnown RBP17.64■□□□□ 0.41
NUP50-218ENST00000493456 CTBSQ01459 385 aa17.64■□□□□ 0.41
NUP50-218ENST00000493456 MC1RQ01726 317 aa17.64■□□□□ 0.41
NUP50-218ENST00000493456 CAMK4Q16566 473 aa17.64■□□□□ 0.41
NUP50-218ENST00000493456 CRTC2Q53ET0 693 aaPredicted RBP17.64■□□□□ 0.41
NUP50-218ENST00000493456 LACTB2Q53H82 288 aaPredicted RBP17.64■□□□□ 0.41
NUP50-218ENST00000493456 ANKS6Q68DC2 871 aa17.64■□□□□ 0.41
NUP50-218ENST00000493456 PHF13Q86YI8 300 aaPredicted RBP17.64■□□□□ 0.41
NUP50-218ENST00000493456 NRSN1Q8IZ57 195 aa17.64■□□□□ 0.41
NUP50-218ENST00000493456 BMPERQ8N8U9 685 aa17.64■□□□□ 0.41
NUP50-218ENST00000493456 PATE1Q8WXA2 126 aa17.64■□□□□ 0.41
NUP50-218ENST00000493456 CELF6Q96J87 481 aaKnown RBP17.64■□□□□ 0.41
NUP50-218ENST00000493456 SLC39A8Q9C0K1 460 aa17.64■□□□□ 0.41
NUP50-218ENST00000493456 GANQ9H2C0 597 aa17.64■□□□□ 0.41
NUP50-218ENST00000493456 PDP2Q9P2J9 529 aa17.64■□□□□ 0.41
NUP50-218ENST00000493456 SLC17A4Q9Y2C5 497 aa17.64■□□□□ 0.41
NUP50-218ENST00000493456 UNC79Q9P2D8 2635 aa17.64■□□□□ 0.41
NUP50-218ENST00000493456 A8MX80 341 aa17.63■□□□□ 0.41
NUP50-218ENST00000493456 EIF3CLB5ME19 914 aaKnown RBP17.63■□□□□ 0.41
NUP50-218ENST00000493456 DUX1O43812 170 aa17.63■□□□□ 0.41
NUP50-218ENST00000493456 PRKAR1AP10644 381 aa17.63■□□□□ 0.41
NUP50-218ENST00000493456 MPSTP25325 297 aa17.63■□□□□ 0.41
NUP50-218ENST00000493456 SOX5P35711 763 aa17.63■□□□□ 0.41
NUP50-218ENST00000493456 ADCY8P40145 1251 aa17.63■□□□□ 0.41
NUP50-218ENST00000493456 ACTR1BP42025 376 aa17.63■□□□□ 0.41
NUP50-218ENST00000493456 FASLGP48023 281 aa17.63■□□□□ 0.41
NUP50-218ENST00000493456 SCNN1BP51168 640 aa17.63■□□□□ 0.41
NUP50-218ENST00000493456 RENBPP51606 427 aa17.63■□□□□ 0.41
NUP50-218ENST00000493456 ACTR1AP61163 376 aa17.63■□□□□ 0.41
NUP50-218ENST00000493456 ABHD18Q0P651 414 aa17.63■□□□□ 0.41
NUP50-218ENST00000493456 SEPT6Q14141 434 aa17.63■□□□□ 0.41
NUP50-218ENST00000493456 CNGA3Q16281 694 aa17.63■□□□□ 0.41
NUP50-218ENST00000493456 HSP90AA4PQ58FG1 418 aa17.63■□□□□ 0.41
NUP50-218ENST00000493456 DNAJC24Q6P3W2 148 aa17.63■□□□□ 0.41
NUP50-218ENST00000493456 CEACAM20Q6UY09 585 aa17.63■□□□□ 0.41
NUP50-218ENST00000493456 RTP4Q96DX8 246 aa17.63■□□□□ 0.41
NUP50-218ENST00000493456 DTD2Q96FN9 168 aa17.63■□□□□ 0.41
NUP50-218ENST00000493456 ABHD17AQ96GS6 310 aa17.63■□□□□ 0.41
NUP50-218ENST00000493456 AHCYL2Q96HN2 611 aaKnown RBP17.63■□□□□ 0.41
NUP50-218ENST00000493456 EIF3CQ99613 913 aaKnown RBP17.63■□□□□ 0.41
NUP50-218ENST00000493456 CNPY3Q9BT09 278 aa17.63■□□□□ 0.41
NUP50-218ENST00000493456 SPRY4Q9C004 299 aa17.63■□□□□ 0.41
NUP50-218ENST00000493456 TRIT1Q9H3H1 467 aaKnown RBP17.63■□□□□ 0.41
NUP50-218ENST00000493456 SP110Q9HB58 689 aa17.63■□□□□ 0.41
NUP50-218ENST00000493456 TMEM9Q9P0T7 183 aa17.63■□□□□ 0.41
NUP50-218ENST00000493456 ST14Q9Y5Y6 855 aa17.63■□□□□ 0.41
NUP50-218ENST00000493456 SPTAN1Q13813 2472 aaKnown RBP17.63■□□□□ 0.41
NUP50-218ENST00000493456 MYO9AB2RTY4 2548 aa17.63■□□□□ 0.41
NUP50-218ENST00000493456 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.62■□□□□ 0.41
NUP50-218ENST00000493456 PSMD11O00231 422 aa17.62■□□□□ 0.41
NUP50-218ENST00000493456 SOCS5O75159 536 aa17.62■□□□□ 0.41
NUP50-218ENST00000493456 HEXIM1O94992 359 aaKnown RBP17.62■□□□□ 0.41
NUP50-218ENST00000493456 VIPR1P32241 457 aa17.62■□□□□ 0.41
NUP50-218ENST00000493456 CD97P48960 835 aa17.62■□□□□ 0.41
NUP50-218ENST00000493456 JAM2P57087 298 aa17.62■□□□□ 0.41
NUP50-218ENST00000493456 KLRB1Q12918 225 aa17.62■□□□□ 0.41
NUP50-218ENST00000493456 CLEC16AQ2KHT3 1053 aa17.62■□□□□ 0.41
NUP50-218ENST00000493456 ATCAYQ86WG3 371 aa17.62■□□□□ 0.41
NUP50-218ENST00000493456 OR10G6Q8NH81 332 aa17.62■□□□□ 0.41
NUP50-218ENST00000493456 MIB2Q96AX9 1013 aa17.62■□□□□ 0.41
NUP50-218ENST00000493456 MCEEQ96PE7 176 aa17.62■□□□□ 0.41
NUP50-218ENST00000493456 PLAAQ9Y263 795 aa17.62■□□□□ 0.41
NUP50-218ENST00000493456 LOC101059948A0A1B0GTJ6 334 aa17.61■□□□□ 0.41
NUP50-218ENST00000493456 TCRBV5S1A1TA0A578 114 aa17.61■□□□□ 0.41
NUP50-218ENST00000493456 EEF2KO00418 725 aaKnown RBP17.61■□□□□ 0.41
NUP50-218ENST00000493456 HTRA2O43464 458 aaPredicted RBP17.61■□□□□ 0.41
NUP50-218ENST00000493456 CYP2A6P11509 494 aaPredicted RBP17.61■□□□□ 0.41
NUP50-218ENST00000493456 EEF1GP26641 437 aaKnown RBP17.61■□□□□ 0.41
NUP50-218ENST00000493456 MC2RQ01718 297 aa17.61■□□□□ 0.41
NUP50-218ENST00000493456 IL10RBQ08334 325 aa17.61■□□□□ 0.41
NUP50-218ENST00000493456 BECN1Q14457 450 aa17.61■□□□□ 0.41
NUP50-218ENST00000493456 C4orf17Q53FE4 359 aa17.61■□□□□ 0.41
NUP50-218ENST00000493456 RAET1GQ6H3X3 334 aa17.61■□□□□ 0.41
NUP50-218ENST00000493456 WDR74Q6RFH5 385 aaPredicted RBP17.61■□□□□ 0.41
NUP50-218ENST00000493456 MON1BQ7L1V2 547 aa17.61■□□□□ 0.41
NUP50-218ENST00000493456 PTCD2Q8WV60 388 aaKnown RBP17.61■□□□□ 0.41
NUP50-218ENST00000493456 STARD8Q92502 1023 aa17.61■□□□□ 0.41
NUP50-218ENST00000493456 SCARF2Q96GP6 870 aaPredicted RBP17.61■□□□□ 0.41
NUP50-218ENST00000493456 PSKH2Q96QS6 385 aa17.61■□□□□ 0.41
NUP50-218ENST00000493456 PCDHB18PQ96TA0 734 aa17.61■□□□□ 0.41
NUP50-218ENST00000493456 SLC38A3Q99624 504 aa17.61■□□□□ 0.41
NUP50-218ENST00000493456 FBXO8Q9NRD0 319 aa17.61■□□□□ 0.41
NUP50-218ENST00000493456 DACH1Q9UI36 760 aa17.61■□□□□ 0.41
NUP50-218ENST00000493456 TMEM184BQ9Y519 407 aaPredicted RBP17.61■□□□□ 0.41
NUP50-218ENST00000493456 KCTD3Q9Y597 815 aa17.61■□□□□ 0.41
NUP50-218ENST00000493456 NOTCH2Q04721 2471 aa17.6■□□□□ 0.41
NUP50-218ENST00000493456 BLACEA4D250 179 aa17.6■□□□□ 0.41
NUP50-218ENST00000493456 GOLGA6CA6NDK9 693 aa17.6■□□□□ 0.41
NUP50-218ENST00000493456 GOLGA6BA6NDN3 693 aa17.6■□□□□ 0.41
NUP50-218ENST00000493456 PRR19A6NJB7 356 aa17.6■□□□□ 0.41
NUP50-218ENST00000493456 CPP00450 1065 aa17.6■□□□□ 0.41
NUP50-218ENST00000493456 GOLGA6DP0CG33 693 aa17.6■□□□□ 0.41
NUP50-218ENST00000493456 OAS2P29728 719 aaKnown RBP17.6■□□□□ 0.41
NUP50-218ENST00000493456 ETV3P41162 512 aa17.6■□□□□ 0.41
NUP50-218ENST00000493456 NOP2P46087 812 aaKnown RBP17.6■□□□□ 0.41
NUP50-218ENST00000493456 PPM1FP49593 454 aaPredicted RBP17.6■□□□□ 0.41
NUP50-218ENST00000493456 POLR2FP61218 127 aaKnown RBP17.6■□□□□ 0.41
NUP50-218ENST00000493456 RPL7AP62424 266 aaKnown RBP17.6■□□□□ 0.41
NUP50-218ENST00000493456 SYCP1Q15431 976 aa17.6■□□□□ 0.41
NUP50-218ENST00000493456 DEFB109BQ30KR1 87 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms