RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 AP2M1Q96CW1 435 aa12.77□□□□□ -0.37
CLIP2-209ENST00000493166 SRPK1Q96SB4 655 aaKnown RBP12.77□□□□□ -0.37
CLIP2-209ENST00000493166 GORASP1Q9BQQ3 440 aa12.77□□□□□ -0.37
CLIP2-209ENST00000493166 APOOQ9BUR5 198 aa12.77□□□□□ -0.37
CLIP2-209ENST00000493166 FICDQ9BVA6 458 aa12.77□□□□□ -0.37
CLIP2-209ENST00000493166 GPR63Q9BZJ6 419 aa12.77□□□□□ -0.37
CLIP2-209ENST00000493166 SLC32A1Q9H598 525 aa12.77□□□□□ -0.37
CLIP2-209ENST00000493166 WDR26Q9H7D7 661 aa12.77□□□□□ -0.37
CLIP2-209ENST00000493166 ZFYVE1Q9HBF4 777 aa12.77□□□□□ -0.37
CLIP2-209ENST00000493166 MAGEE1Q9HCI5 957 aa12.77□□□□□ -0.37
CLIP2-209ENST00000493166 PKD2L2Q9NZM6 624 aa12.77□□□□□ -0.37
CLIP2-209ENST00000493166 CD84Q9UIB8 345 aa12.77□□□□□ -0.37
CLIP2-209ENST00000493166 SHOC2Q9UQ13 582 aa12.77□□□□□ -0.37
CLIP2-209ENST00000493166 ZNF711Q9Y462 761 aa12.77□□□□□ -0.37
CLIP2-209ENST00000493166 PLXNB3Q9ULL4 1909 aa12.76□□□□□ -0.37
CLIP2-209ENST00000493166 H3BM21 787 aa12.76□□□□□ -0.37
CLIP2-209ENST00000493166 K7ESM1 405 aa12.76□□□□□ -0.37
CLIP2-209ENST00000493166 CACNB4O00305 520 aaPredicted RBP12.76□□□□□ -0.37
CLIP2-209ENST00000493166 SH3BP5O60239 455 aa12.76□□□□□ -0.37
CLIP2-209ENST00000493166 SDC3O75056 442 aa12.76□□□□□ -0.37
CLIP2-209ENST00000493166 IFNB1P01574 187 aa12.76□□□□□ -0.37
CLIP2-209ENST00000493166 FGF1P05230 155 aa12.76□□□□□ -0.37
CLIP2-209ENST00000493166 ATXN1LP0C7T5 689 aaKnown RBP12.76□□□□□ -0.37
CLIP2-209ENST00000493166 CSRP1P21291 193 aaKnown RBP12.76□□□□□ -0.37
CLIP2-209ENST00000493166 STIP1P31948 543 aaKnown RBP12.76□□□□□ -0.37
CLIP2-209ENST00000493166 ACTN2P35609 894 aa12.76□□□□□ -0.37
CLIP2-209ENST00000493166 CHRNA4P43681 627 aa12.76□□□□□ -0.37
CLIP2-209ENST00000493166 NOVA1P51513 510 aaKnown RBP12.76□□□□□ -0.37
CLIP2-209ENST00000493166 GNG11P61952 73 aa12.76□□□□□ -0.37
CLIP2-209ENST00000493166 DPTQ07507 201 aa12.76□□□□□ -0.37
CLIP2-209ENST00000493166 BNIP3Q12983 259 aa12.76□□□□□ -0.37
CLIP2-209ENST00000493166 CDKN3Q16667 212 aa12.76□□□□□ -0.37
CLIP2-209ENST00000493166 PARP6Q2NL67 630 aa12.76□□□□□ -0.37
CLIP2-209ENST00000493166 ZNF542PQ5EBM4 170 aa12.76□□□□□ -0.37
CLIP2-209ENST00000493166 RAET1GQ6H3X3 334 aa12.76□□□□□ -0.37
CLIP2-209ENST00000493166 PSAPL1Q6NUJ1 521 aa12.76□□□□□ -0.37
CLIP2-209ENST00000493166 ZNF765Q7L2R6 523 aa12.76□□□□□ -0.37
CLIP2-209ENST00000493166 PIP4P1Q86T03 277 aa12.76□□□□□ -0.37
CLIP2-209ENST00000493166 RAVER1Q8IY67 606 aaKnown RBP12.76□□□□□ -0.37
CLIP2-209ENST00000493166 NRSN1Q8IZ57 195 aa12.76□□□□□ -0.37
CLIP2-209ENST00000493166 PELI3Q8N2H9 469 aa12.76□□□□□ -0.37
CLIP2-209ENST00000493166 CCDC89Q8N998 374 aa12.76□□□□□ -0.37
CLIP2-209ENST00000493166 ATL2Q8NHH9 583 aa12.76□□□□□ -0.37
CLIP2-209ENST00000493166 SAP25Q8TEE9 199 aa12.76□□□□□ -0.37
CLIP2-209ENST00000493166 FUBP1Q96AE4 644 aaKnown RBP12.76□□□□□ -0.37
CLIP2-209ENST00000493166 RTP4Q96DX8 246 aa12.76□□□□□ -0.37
CLIP2-209ENST00000493166 CAMK1GQ96NX5 476 aa12.76□□□□□ -0.37
CLIP2-209ENST00000493166 OSBPL9Q96SU4 736 aa12.76□□□□□ -0.37
CLIP2-209ENST00000493166 NAP1L3Q99457 506 aaPredicted RBP12.76□□□□□ -0.37
CLIP2-209ENST00000493166 HOMER3Q9NSC5 361 aa12.76□□□□□ -0.37
CLIP2-209ENST00000493166 ARID1BQ8NFD5 2236 aaPredicted RBP12.76□□□□□ -0.37
CLIP2-209ENST00000493166 CNOT1A5YKK6 2376 aaKnown RBP12.76□□□□□ -0.37
CLIP2-209ENST00000493166 PGRMC1O00264 195 aaKnown RBP12.75□□□□□ -0.37
CLIP2-209ENST00000493166 CACNA1AO00555 2505 aa12.75□□□□□ -0.37
CLIP2-209ENST00000493166 METTL18O95568 372 aa12.75□□□□□ -0.37
CLIP2-209ENST00000493166 AGTP01019 485 aa12.75□□□□□ -0.37
CLIP2-209ENST00000493166 CSF2P04141 144 aa12.75□□□□□ -0.37
CLIP2-209ENST00000493166 NME1P15531 152 aaKnown RBP12.75□□□□□ -0.37
CLIP2-209ENST00000493166 JUNDP17535 347 aa12.75□□□□□ -0.37
CLIP2-209ENST00000493166 TRIM23P36406 574 aa12.75□□□□□ -0.37
CLIP2-209ENST00000493166 GRK6P43250 576 aa12.75□□□□□ -0.37
CLIP2-209ENST00000493166 GPR1P46091 355 aa12.75□□□□□ -0.37
CLIP2-209ENST00000493166 SPINT3P49223 89 aa12.75□□□□□ -0.37
CLIP2-209ENST00000493166 KIAA1024LP59773 190 aa12.75□□□□□ -0.37
CLIP2-209ENST00000493166 HNRNPKP61978 463 aaKnown RBP eCLIP12.75□□□□□ -0.37
CLIP2-209ENST00000493166 EIF2B5Q13144 721 aaKnown RBP12.75□□□□□ -0.37
CLIP2-209ENST00000493166 PPM1JQ5JR12 505 aa12.75□□□□□ -0.37
CLIP2-209ENST00000493166 FAXCQ5TGI0 409 aa12.75□□□□□ -0.37
CLIP2-209ENST00000493166 DRICH1Q6PGQ1 229 aaPredicted RBP12.75□□□□□ -0.37
CLIP2-209ENST00000493166 ENPP7Q6UWV6 458 aa12.75□□□□□ -0.37
CLIP2-209ENST00000493166 DBX2Q6ZNG2 339 aa12.75□□□□□ -0.37
CLIP2-209ENST00000493166 HEATR4Q86WZ0 1026 aa12.75□□□□□ -0.37
CLIP2-209ENST00000493166 RASGEF1CQ8N431 466 aa12.75□□□□□ -0.37
CLIP2-209ENST00000493166 TAB3Q8N5C8 712 aaPredicted RBP12.75□□□□□ -0.37
CLIP2-209ENST00000493166 BLOC1S5Q8TDH9 187 aa12.75□□□□□ -0.37
CLIP2-209ENST00000493166 RHBDD1Q8TEB9 315 aa12.75□□□□□ -0.37
CLIP2-209ENST00000493166 SCAMP4Q969E2 229 aa12.75□□□□□ -0.37
CLIP2-209ENST00000493166 MS4A14Q96JA4 679 aa12.75□□□□□ -0.37
CLIP2-209ENST00000493166 WDR92Q96MX6 357 aa12.75□□□□□ -0.37
CLIP2-209ENST00000493166 TBL1YQ9BQ87 522 aa12.75□□□□□ -0.37
CLIP2-209ENST00000493166 APOL2Q9BQE5 337 aa12.75□□□□□ -0.37
CLIP2-209ENST00000493166 ABCG8Q9H221 673 aa12.75□□□□□ -0.37
CLIP2-209ENST00000493166 TRABDQ9H4I3 376 aa12.75□□□□□ -0.37
CLIP2-209ENST00000493166 PHPT1Q9NRX4 125 aaPredicted RBP12.75□□□□□ -0.37
CLIP2-209ENST00000493166 HACD3Q9P035 362 aa12.75□□□□□ -0.37
CLIP2-209ENST00000493166 APOBEC3BQ9UH17 382 aaKnown RBP12.75□□□□□ -0.37
CLIP2-209ENST00000493166 SNX12Q9UMY4 172 aa12.75□□□□□ -0.37
CLIP2-209ENST00000493166 BTBD3Q9Y2F9 522 aa12.75□□□□□ -0.37
CLIP2-209ENST00000493166 SPO11Q9Y5K1 396 aa12.75□□□□□ -0.37
CLIP2-209ENST00000493166 SPEGQ15772 3267 aa12.74□□□□□ -0.37
CLIP2-209ENST00000493166 RGSL1A5PLK6 1076 aa12.74□□□□□ -0.37
CLIP2-209ENST00000493166 PDE2AO00408 941 aaPredicted RBP12.74□□□□□ -0.37
CLIP2-209ENST00000493166 USP12O75317 370 aa12.74□□□□□ -0.37
CLIP2-209ENST00000493166 PIAS2O75928 621 aa12.74□□□□□ -0.37
CLIP2-209ENST00000493166 KCNK5O95279 499 aa12.74□□□□□ -0.37
CLIP2-209ENST00000493166 PYGLP06737 847 aa12.74□□□□□ -0.37
CLIP2-209ENST00000493166 HOXC4P09017 264 aaPredicted RBP12.74□□□□□ -0.37
CLIP2-209ENST00000493166 MYCLP1P12525 358 aaPredicted RBP12.74□□□□□ -0.37
CLIP2-209ENST00000493166 CEACAM1P13688 526 aa12.74□□□□□ -0.37
CLIP2-209ENST00000493166 KELP23276 732 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms