RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 GPR156Q8NFN8 814 aa13.22□□□□□ -0.29
HDAC3-213ENST00000492506 OR2AP1Q8NGE2 309 aa13.22□□□□□ -0.29
HDAC3-213ENST00000492506 NELFBQ8WX92 580 aa13.22□□□□□ -0.29
HDAC3-213ENST00000492506 SCG3Q8WXD2 468 aaKnown RBP13.22□□□□□ -0.29
HDAC3-213ENST00000492506 ARHGEF2Q92974 986 aaKnown RBP13.22□□□□□ -0.29
HDAC3-213ENST00000492506 ARHGEF26Q96DR7 871 aa13.22□□□□□ -0.29
HDAC3-213ENST00000492506 KLHL32Q96NJ5 620 aa13.22□□□□□ -0.29
HDAC3-213ENST00000492506 HAPLN3Q96S86 360 aa13.22□□□□□ -0.29
HDAC3-213ENST00000492506 EPAS1Q99814 870 aa13.22□□□□□ -0.29
HDAC3-213ENST00000492506 ZYG11BQ9C0D3 744 aa13.22□□□□□ -0.29
HDAC3-213ENST00000492506 SEPT10Q9P0V9 454 aa13.22□□□□□ -0.29
HDAC3-213ENST00000492506 PPARGC1AQ9UBK2 798 aaKnown RBP13.22□□□□□ -0.29
HDAC3-213ENST00000492506 APPL1Q9UKG1 709 aa13.22□□□□□ -0.29
HDAC3-213ENST00000492506 MAN1B1Q9UKM7 699 aa13.22□□□□□ -0.29
HDAC3-213ENST00000492506 STAP1Q9ULZ2 295 aa13.22□□□□□ -0.29
HDAC3-213ENST00000492506 GPR34Q9UPC5 381 aa13.22□□□□□ -0.29
HDAC3-213ENST00000492506 A0A1W2PQC6 194 aa13.21□□□□□ -0.29
HDAC3-213ENST00000492506 IQCJ-SCHIP1C9J366 451 aaPredicted RBP13.21□□□□□ -0.29
HDAC3-213ENST00000492506 KRIT1O00522 736 aa13.21□□□□□ -0.29
HDAC3-213ENST00000492506 ATP6V1G2O95670 118 aa13.21□□□□□ -0.29
HDAC3-213ENST00000492506 POP4O95707 220 aaKnown RBP13.21□□□□□ -0.29
HDAC3-213ENST00000492506 GSRP00390 522 aa13.21□□□□□ -0.29
HDAC3-213ENST00000492506 TCP1P17987 556 aaKnown RBP13.21□□□□□ -0.29
HDAC3-213ENST00000492506 CYLC1P35663 651 aaPredicted RBP13.21□□□□□ -0.29
HDAC3-213ENST00000492506 BLKP51451 505 aa13.21□□□□□ -0.29
HDAC3-213ENST00000492506 CCNG1P51959 295 aa13.21□□□□□ -0.29
HDAC3-213ENST00000492506 IFT88Q13099 833 aa13.21□□□□□ -0.29
HDAC3-213ENST00000492506 BLMHQ13867 455 aa13.21□□□□□ -0.29
HDAC3-213ENST00000492506 WSCD2Q2TBF2 565 aa13.21□□□□□ -0.29
HDAC3-213ENST00000492506 MYLK3Q32MK0 819 aa13.21□□□□□ -0.29
HDAC3-213ENST00000492506 TTC7BQ86TV6 843 aa13.21□□□□□ -0.29
HDAC3-213ENST00000492506 CCNJLQ8IV13 435 aa13.21□□□□□ -0.29
HDAC3-213ENST00000492506 SLITRK4Q8IW52 837 aa13.21□□□□□ -0.29
HDAC3-213ENST00000492506 SFTPA2Q8IWL1 248 aa13.21□□□□□ -0.29
HDAC3-213ENST00000492506 IFT20Q8IY31 132 aa13.21□□□□□ -0.29
HDAC3-213ENST00000492506 RYBPQ8N488 228 aaPredicted RBP13.21□□□□□ -0.29
HDAC3-213ENST00000492506 OR6C4Q8NGE1 309 aa13.21□□□□□ -0.29
HDAC3-213ENST00000492506 USP7Q93009 1102 aa13.21□□□□□ -0.29
HDAC3-213ENST00000492506 TMEM159Q96B96 161 aa13.21□□□□□ -0.29
HDAC3-213ENST00000492506 SLC12A9Q9BXP2 914 aa13.21□□□□□ -0.29
HDAC3-213ENST00000492506 OSBPL1AQ9BXW6 950 aa13.21□□□□□ -0.29
HDAC3-213ENST00000492506 NOD2Q9HC29 1040 aa13.21□□□□□ -0.29
HDAC3-213ENST00000492506 PLCB1Q9NQ66 1216 aa13.21□□□□□ -0.29
HDAC3-213ENST00000492506 IRAK4Q9NWZ3 460 aa13.21□□□□□ -0.29
HDAC3-213ENST00000492506 AJAP1Q9UKB5 411 aaPredicted RBP13.21□□□□□ -0.29
HDAC3-213ENST00000492506 DOLKQ9UPQ8 538 aa13.21□□□□□ -0.29
HDAC3-213ENST00000492506 GMNCA6NCL1 334 aa13.2□□□□□ -0.3
HDAC3-213ENST00000492506 AGRPO00253 132 aa13.2□□□□□ -0.3
HDAC3-213ENST00000492506 RASGRP1O95267 797 aa13.2□□□□□ -0.3
HDAC3-213ENST00000492506 GNA14O95837 355 aa13.2□□□□□ -0.3
HDAC3-213ENST00000492506 GP1BBP13224 206 aa13.2□□□□□ -0.3
HDAC3-213ENST00000492506 CTSEP14091 401 aa13.2□□□□□ -0.3
HDAC3-213ENST00000492506 TIMP2P16035 220 aa13.2□□□□□ -0.3
HDAC3-213ENST00000492506 CCND1P24385 295 aa13.2□□□□□ -0.3
HDAC3-213ENST00000492506 FLT3P36888 993 aa13.2□□□□□ -0.3
HDAC3-213ENST00000492506 PPP1R2P41236 205 aa13.2□□□□□ -0.3
HDAC3-213ENST00000492506 GABRB2P47870 512 aa13.2□□□□□ -0.3
HDAC3-213ENST00000492506 SCTRP47872 440 aa13.2□□□□□ -0.3
HDAC3-213ENST00000492506 ARSDP51689 593 aa13.2□□□□□ -0.3
HDAC3-213ENST00000492506 SNRPD1P62314 119 aaKnown RBP13.2□□□□□ -0.3
HDAC3-213ENST00000492506 NFATC4Q14934 902 aa13.2□□□□□ -0.3
HDAC3-213ENST00000492506 CERCAMQ5T4B2 595 aa13.2□□□□□ -0.3
HDAC3-213ENST00000492506 ATXN7L2Q5T6C5 722 aaPredicted RBP13.2□□□□□ -0.3
HDAC3-213ENST00000492506 MANEALQ5VSG8 457 aa13.2□□□□□ -0.3
HDAC3-213ENST00000492506 OGFOD3Q6PK18 319 aa13.2□□□□□ -0.3
HDAC3-213ENST00000492506 GDPD4Q6W3E5 623 aa13.2□□□□□ -0.3
HDAC3-213ENST00000492506 BZW1Q7L1Q6 419 aaKnown RBP13.2□□□□□ -0.3
HDAC3-213ENST00000492506 SPRED1Q7Z699 444 aa13.2□□□□□ -0.3
HDAC3-213ENST00000492506 SLC47A2Q86VL8 602 aa13.2□□□□□ -0.3
HDAC3-213ENST00000492506 GKN2Q86XP6 184 aa13.2□□□□□ -0.3
HDAC3-213ENST00000492506 ANKS4BQ8N8V4 417 aa13.2□□□□□ -0.3
HDAC3-213ENST00000492506 Q8N9G6 341 aaPredicted RBP13.2□□□□□ -0.3
HDAC3-213ENST00000492506 ZSCAN1Q8NBB4 408 aa13.2□□□□□ -0.3
HDAC3-213ENST00000492506 LZICQ8WZA0 190 aa13.2□□□□□ -0.3
HDAC3-213ENST00000492506 TBC1D31Q96DN5 1066 aa13.2□□□□□ -0.3
HDAC3-213ENST00000492506 ATP6V1G3Q96LB4 118 aa13.2□□□□□ -0.3
HDAC3-213ENST00000492506 FAM81BQ96LP2 452 aa13.2□□□□□ -0.3
HDAC3-213ENST00000492506 RBM15Q96T37 977 aaKnown RBP eCLIP13.2□□□□□ -0.33e-6■■■■□ 20.8
HDAC3-213ENST00000492506 WRAP53Q9BUR4 548 aaKnown RBP13.2□□□□□ -0.3
HDAC3-213ENST00000492506 C1QTNF7Q9BXJ2 289 aa13.2□□□□□ -0.3
HDAC3-213ENST00000492506 B3GNT4Q9C0J1 378 aa13.2□□□□□ -0.3
HDAC3-213ENST00000492506 ADNPQ9H2P0 1102 aa13.2□□□□□ -0.3
HDAC3-213ENST00000492506 SYNCQ9H7C4 482 aa13.2□□□□□ -0.3
HDAC3-213ENST00000492506 CNOT10Q9H9A5 744 aaKnown RBP13.2□□□□□ -0.3
HDAC3-213ENST00000492506 APEX2Q9UBZ4 518 aa13.2□□□□□ -0.3
HDAC3-213ENST00000492506 NEU3Q9UQ49 428 aa13.2□□□□□ -0.3
HDAC3-213ENST00000492506 CTNND2Q9UQB3 1225 aa13.2□□□□□ -0.3
HDAC3-213ENST00000492506 RNF215Q9Y6U7 377 aa13.2□□□□□ -0.3
HDAC3-213ENST00000492506 SPTBN1Q01082 2364 aaKnown RBP13.2□□□□□ -0.3
HDAC3-213ENST00000492506 TMEM110-MUSTN1A8MSY1 372 aa13.19□□□□□ -0.3
HDAC3-213ENST00000492506 WFS1O76024 890 aa13.19□□□□□ -0.3
HDAC3-213ENST00000492506 PNLIPP16233 465 aa13.19□□□□□ -0.3
HDAC3-213ENST00000492506 GLB1P16278 677 aa13.19□□□□□ -0.3
HDAC3-213ENST00000492506 CR2P20023 1033 aa13.19□□□□□ -0.3
HDAC3-213ENST00000492506 CD82P27701 267 aa13.19□□□□□ -0.3
HDAC3-213ENST00000492506 CASP14P31944 242 aa13.19□□□□□ -0.3
HDAC3-213ENST00000492506 CDH5P33151 784 aaPredicted RBP13.19□□□□□ -0.3
HDAC3-213ENST00000492506 SCNN1AP37088 669 aa13.19□□□□□ -0.3
HDAC3-213ENST00000492506 PAPOLAP51003 745 aaKnown RBP13.19□□□□□ -0.3
HDAC3-213ENST00000492506 STX17P56962 302 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms