RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 PCDH15Q96QU1 1955 aa9.45□□□□□ -0.9
BRCA1-219ENST00000491747 CXorf51AA0A1B0GTR3 108 aa9.45□□□□□ -0.9
BRCA1-219ENST00000491747 METTL12A8MUP2 240 aa9.45□□□□□ -0.9
BRCA1-219ENST00000491747 C10orf142B7Z368 130 aa9.45□□□□□ -0.9
BRCA1-219ENST00000491747 DFFAO00273 331 aa9.45□□□□□ -0.9
BRCA1-219ENST00000491747 TM9SF1O15321 606 aa9.45□□□□□ -0.9
BRCA1-219ENST00000491747 GDF9O60383 454 aa9.45□□□□□ -0.9
BRCA1-219ENST00000491747 PRAMEF11O60813 436 aa9.45□□□□□ -0.9
BRCA1-219ENST00000491747 TMCC1O94876 653 aa9.45□□□□□ -0.9
BRCA1-219ENST00000491747 ADH1BP00325 375 aa9.45□□□□□ -0.9
BRCA1-219ENST00000491747 ZNF806P0C7X5 589 aa9.45□□□□□ -0.9
BRCA1-219ENST00000491747 PI4KAP42356 2102 aa9.45□□□□□ -0.9
BRCA1-219ENST00000491747 ZNF135P52742 658 aaPredicted RBP9.45□□□□□ -0.9
BRCA1-219ENST00000491747 KLC1Q07866 573 aa9.45□□□□□ -0.9
BRCA1-219ENST00000491747 PDIA2Q13087 525 aaKnown RBP9.45□□□□□ -0.9
BRCA1-219ENST00000491747 KRT81Q14533 505 aa9.45□□□□□ -0.9
BRCA1-219ENST00000491747 MUM1Q2TAK8 710 aa9.45□□□□□ -0.9
BRCA1-219ENST00000491747 ATXN7L2Q5T6C5 722 aaPredicted RBP9.45□□□□□ -0.9
BRCA1-219ENST00000491747 PEAR1Q5VY43 1037 aaPredicted RBP9.45□□□□□ -0.9
BRCA1-219ENST00000491747 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.45□□□□□ -0.9
BRCA1-219ENST00000491747 PRR23CQ6ZRP0 262 aa9.45□□□□□ -0.9
BRCA1-219ENST00000491747 CAPN12Q6ZSI9 719 aa9.45□□□□□ -0.9
BRCA1-219ENST00000491747 PCDH19Q8TAB3 1148 aa9.45□□□□□ -0.9
BRCA1-219ENST00000491747 GRIN3AQ8TCU5 1115 aa9.45□□□□□ -0.9
BRCA1-219ENST00000491747 GANCQ8TET4 914 aa9.45□□□□□ -0.9
BRCA1-219ENST00000491747 FAM131CQ96AQ9 280 aa9.45□□□□□ -0.9
BRCA1-219ENST00000491747 ISG20Q96AZ6 181 aaKnown RBP9.45□□□□□ -0.9
BRCA1-219ENST00000491747 ALKBH8Q96BT7 664 aaKnown RBP9.45□□□□□ -0.9
BRCA1-219ENST00000491747 OMDQ99983 421 aa9.45□□□□□ -0.9
BRCA1-219ENST00000491747 PHACTR1Q9C0D0 580 aa9.45□□□□□ -0.9
BRCA1-219ENST00000491747 BTBD1Q9H0C5 482 aa9.45□□□□□ -0.9
BRCA1-219ENST00000491747 NPHS2Q9NP85 383 aa9.45□□□□□ -0.9
BRCA1-219ENST00000491747 FSCN3Q9NQT6 498 aa9.45□□□□□ -0.9
BRCA1-219ENST00000491747 LHX3Q9UBR4 397 aa9.45□□□□□ -0.9
BRCA1-219ENST00000491747 IL36AQ9UHA7 158 aa9.45□□□□□ -0.9
BRCA1-219ENST00000491747 PIEZO1Q92508 2521 aa9.45□□□□□ -0.9
BRCA1-219ENST00000491747 C3orf70A6NLC5 250 aaPredicted RBP9.45□□□□□ -0.9
BRCA1-219ENST00000491747 H0Y3Z8 333 aa9.45□□□□□ -0.9
BRCA1-219ENST00000491747 LRP3O75074 770 aa9.45□□□□□ -0.9
BRCA1-219ENST00000491747 ENTPD5O75356 428 aa9.45□□□□□ -0.9
BRCA1-219ENST00000491747 LEFTY1O75610 366 aa9.45□□□□□ -0.9
BRCA1-219ENST00000491747 SEMA4FO95754 770 aa9.45□□□□□ -0.9
BRCA1-219ENST00000491747 KRT1P04264 644 aa9.45□□□□□ -0.9
BRCA1-219ENST00000491747 ZSCAN5DPP0CG00 497 aa9.45□□□□□ -0.9
BRCA1-219ENST00000491747 KRT10P13645 584 aa9.45□□□□□ -0.9
BRCA1-219ENST00000491747 KDELR1P24390 212 aa9.45□□□□□ -0.9
BRCA1-219ENST00000491747 CNTN1Q12860 1018 aa9.45□□□□□ -0.9
BRCA1-219ENST00000491747 LBRQ14739 615 aaKnown RBP9.45□□□□□ -0.9
BRCA1-219ENST00000491747 HIF1AQ16665 826 aa9.45□□□□□ -0.9
BRCA1-219ENST00000491747 HP1BP3Q5SSJ5 553 aaPredicted RBP9.45□□□□□ -0.9
BRCA1-219ENST00000491747 RNASEH2BQ5TBB1 312 aaKnown RBP9.45□□□□□ -0.9
BRCA1-219ENST00000491747 LRRC38Q5VT99 294 aa9.45□□□□□ -0.9
BRCA1-219ENST00000491747 MTDHQ86UE4 582 aaKnown RBP9.45□□□□□ -0.9
BRCA1-219ENST00000491747 PQLC3Q8N755 202 aa9.45□□□□□ -0.9
BRCA1-219ENST00000491747 GLIS1Q8NBF1 620 aa9.45□□□□□ -0.9
BRCA1-219ENST00000491747 KCTD6Q8NC69 237 aa9.45□□□□□ -0.9
BRCA1-219ENST00000491747 TMIEQ8NEW7 156 aa9.45□□□□□ -0.9
BRCA1-219ENST00000491747 CADM4Q8NFZ8 388 aa9.45□□□□□ -0.9
BRCA1-219ENST00000491747 YIPF3Q9GZM5 350 aa9.45□□□□□ -0.9
BRCA1-219ENST00000491747 SGK2Q9HBY8 427 aa9.45□□□□□ -0.9
BRCA1-219ENST00000491747 PCDH9Q9HC56 1237 aa9.45□□□□□ -0.9
BRCA1-219ENST00000491747 NCKAP1Q9Y2A7 1128 aa9.45□□□□□ -0.9
BRCA1-219ENST00000491747 GON4LQ3T8J9 2241 aa9.45□□□□□ -0.9
BRCA1-219ENST00000491747 GVINP1Q7Z2Y8 2422 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 TMEM131Q92545 1883 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 A0A1W2PPM1 405 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 ARHGAP42A6NI28 874 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 INSIG1O15503 277 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 IGHV4-34P06331 123 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 ITGAVP06756 1048 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 KRT7P08729 469 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 LINGO3P0C6S8 592 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 NEFHP12036 1026 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 RGRP47804 291 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 ADPRHP54922 357 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 TAS2R38P59533 333 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 IRX4P78413 519 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 ZRSR2Q15696 482 aaKnown RBP9.44□□□□□ -0.9
BRCA1-219ENST00000491747 KLHL38Q2WGJ6 581 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 INO80DQ53TQ3 878 aaPredicted RBP9.44□□□□□ -0.9
BRCA1-219ENST00000491747 TFDP3Q5H9I0 405 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 AGBL4Q5VU57 503 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 NCBP2-AS2Q69YL0 99 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 NCEH1Q6PIU2 408 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 DSG4Q86SJ6 1040 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 SYT12Q8IV01 421 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 PLPP6Q8IY26 295 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 OR2AP1Q8NGE2 309 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 LRRN4Q8WUT4 740 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 DNASE2BQ8WZ79 361 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 BIRC7Q96CA5 298 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 FAF2Q96CS3 445 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 MRRFQ96E11 262 aaKnown RBP9.44□□□□□ -0.9
BRCA1-219ENST00000491747 EXOC2Q96KP1 924 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 NSMCE3Q96MG7 304 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 SH3GL3Q99963 347 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 HEPHQ9BQS7 1158 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 ORAI3Q9BRQ5 295 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 CALN1Q9BXU9 219 aa9.44□□□□□ -0.9
BRCA1-219ENST00000491747 MAK16Q9BXY0 300 aaKnown RBP9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms