RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 USP33Q8TEY7 942 aa22.82■■□□□ 1.24
USF3-203ENST00000491165 IGSF9Q9P2J2 1179 aa22.82■■□□□ 1.24
USF3-203ENST00000491165 A0A088AWK7 358 aa22.81■■□□□ 1.24
USF3-203ENST00000491165 CCDC189A1A4V9 331 aa22.81■■□□□ 1.24
USF3-203ENST00000491165 KDELR3O43731 214 aa22.81■■□□□ 1.24
USF3-203ENST00000491165 SIN3BO75182 1162 aa22.81■■□□□ 1.24
USF3-203ENST00000491165 FKBP6O75344 327 aa22.81■■□□□ 1.24
USF3-203ENST00000491165 PTPN3P26045 913 aa22.81■■□□□ 1.24
USF3-203ENST00000491165 TMCO4Q5TGY1 634 aa22.81■■□□□ 1.24
USF3-203ENST00000491165 CNTD1Q8N815 330 aa22.81■■□□□ 1.24
USF3-203ENST00000491165 SP110Q9HB58 689 aa22.81■■□□□ 1.24
USF3-203ENST00000491165 COPG2Q9UBF2 871 aa22.81■■□□□ 1.24
USF3-203ENST00000491165 MAGEA13PA6NCF6 341 aa22.81■■□□□ 1.24
USF3-203ENST00000491165 MATN3O15232 486 aa22.81■■□□□ 1.24
USF3-203ENST00000491165 PRKCGP05129 697 aa22.81■■□□□ 1.24
USF3-203ENST00000491165 TYK2P29597 1187 aa22.81■■□□□ 1.24
USF3-203ENST00000491165 GP5P40197 560 aa22.81■■□□□ 1.24
USF3-203ENST00000491165 TXNDC11Q6PKC3 985 aa22.81■■□□□ 1.24
USF3-203ENST00000491165 SORCS1Q8WY21 1168 aa22.81■■□□□ 1.24
USF3-203ENST00000491165 RPL10LQ96L21 214 aaKnown RBP22.81■■□□□ 1.24
USF3-203ENST00000491165 SORT1Q99523 831 aa22.81■■□□□ 1.24
USF3-203ENST00000491165 HEBP1Q9NRV9 189 aa22.81■■□□□ 1.24
USF3-203ENST00000491165 FAM50BQ9Y247 325 aa22.81■■□□□ 1.24
USF3-203ENST00000491165 ATG2BQ96BY7 2078 aa22.8■■□□□ 1.24
USF3-203ENST00000491165 PRRT4C9JH25 899 aa22.8■■□□□ 1.24
USF3-203ENST00000491165 COPAP53621 1224 aa22.8■■□□□ 1.24
USF3-203ENST00000491165 OXCT1P55809 520 aa22.8■■□□□ 1.24
USF3-203ENST00000491165 IL10RBQ08334 325 aa22.8■■□□□ 1.24
USF3-203ENST00000491165 GSTA3Q16772 222 aa22.8■■□□□ 1.24
USF3-203ENST00000491165 SPANXN3Q5MJ09 141 aa22.8■■□□□ 1.24
USF3-203ENST00000491165 MAVSQ7Z434 540 aa22.8■■□□□ 1.24
USF3-203ENST00000491165 CCDC117Q8IWD4 279 aaPredicted RBP22.8■■□□□ 1.24
USF3-203ENST00000491165 ADHFE1Q8IWW8 467 aa22.8■■□□□ 1.24
USF3-203ENST00000491165 ZNF567Q8N184 647 aa22.8■■□□□ 1.24
USF3-203ENST00000491165 DCAF4L2Q8NA75 395 aa22.8■■□□□ 1.24
USF3-203ENST00000491165 NXPE3Q969Y0 559 aa22.8■■□□□ 1.24
USF3-203ENST00000491165 CERS2Q96G23 380 aa22.8■■□□□ 1.24
USF3-203ENST00000491165 TTC1Q99614 292 aa22.8■■□□□ 1.24
USF3-203ENST00000491165 CPNE1Q99829 537 aa22.8■■□□□ 1.24
USF3-203ENST00000491165 SLC2A11Q9BYW1 496 aa22.8■■□□□ 1.24
USF3-203ENST00000491165 PNPOQ9NVS9 261 aa22.8■■□□□ 1.24
USF3-203ENST00000491165 TMEM216Q9P0N5 145 aa22.8■■□□□ 1.24
USF3-203ENST00000491165 BPTFQ12830 3046 aa22.8■■□□□ 1.24
USF3-203ENST00000491165 K7ERQ8 282 aa22.79■■□□□ 1.24
USF3-203ENST00000491165 JCHAINP01591 159 aa22.79■■□□□ 1.24
USF3-203ENST00000491165 ERVK-10P10266 1014 aa22.79■■□□□ 1.24
USF3-203ENST00000491165 RALBP11234 206 aa22.79■■□□□ 1.24
USF3-203ENST00000491165 ALOX15P16050 662 aaPredicted RBP22.79■■□□□ 1.24
USF3-203ENST00000491165 STK19P49842 368 aaPredicted RBP22.79■■□□□ 1.24
USF3-203ENST00000491165 IDH3AP50213 366 aa22.79■■□□□ 1.24
USF3-203ENST00000491165 ERFP50548 548 aa22.79■■□□□ 1.24
USF3-203ENST00000491165 PLK1P53350 603 aa22.79■■□□□ 1.24
USF3-203ENST00000491165 ABCE1P61221 599 aaKnown RBP22.79■■□□□ 1.24
USF3-203ENST00000491165 SLC25A3Q00325 362 aa22.79■■□□□ 1.24
USF3-203ENST00000491165 PPM1JQ5JR12 505 aa22.79■■□□□ 1.24
USF3-203ENST00000491165 GRTP1Q5TC63 336 aa22.79■■□□□ 1.24
USF3-203ENST00000491165 OR52E8Q6IFG1 317 aa22.79■■□□□ 1.24
USF3-203ENST00000491165 LRRC49Q8IUZ0 686 aa22.79■■□□□ 1.24
USF3-203ENST00000491165 SLC25A41Q8N5S1 370 aa22.79■■□□□ 1.24
USF3-203ENST00000491165 GATA6Q92908 595 aa22.79■■□□□ 1.24
USF3-203ENST00000491165 BRD8Q9H0E9 1235 aa22.79■■□□□ 1.24
USF3-203ENST00000491165 RPS6KL1Q9Y6S9 549 aa22.79■■□□□ 1.24
USF3-203ENST00000491165 MUSKO15146 869 aa22.79■■□□□ 1.24
USF3-203ENST00000491165 GJB3O75712 270 aa22.79■■□□□ 1.24
USF3-203ENST00000491165 BAG2O95816 211 aa22.79■■□□□ 1.24
USF3-203ENST00000491165 CD68P34810 354 aaPredicted RBP22.79■■□□□ 1.24
USF3-203ENST00000491165 ETFBP38117 255 aa22.79■■□□□ 1.24
USF3-203ENST00000491165 ZNF33AQ06730 810 aa22.79■■□□□ 1.24
USF3-203ENST00000491165 SMAD1Q15797 465 aaKnown RBP22.79■■□□□ 1.24
USF3-203ENST00000491165 CCDC153Q494R4 210 aa22.79■■□□□ 1.24
USF3-203ENST00000491165 AAGABQ6PD74 315 aa22.79■■□□□ 1.24
USF3-203ENST00000491165 IZUMO2Q6UXV1 221 aa22.79■■□□□ 1.24
USF3-203ENST00000491165 AGAP3Q96P47 875 aa22.79■■□□□ 1.24
USF3-203ENST00000491165 IL1RAPL1Q9NZN1 696 aa22.79■■□□□ 1.24
USF3-203ENST00000491165 DEC1Q9P2X7 70 aa22.79■■□□□ 1.24
USF3-203ENST00000491165 PPM1HQ9ULR3 514 aa22.79■■□□□ 1.24
USF3-203ENST00000491165 SLC27A6Q9Y2P4 619 aa22.79■■□□□ 1.24
USF3-203ENST00000491165 PGBD5Q8N414 524 aa22.78■■□□□ 1.24
USF3-203ENST00000491165 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP22.78■■□□□ 1.24
USF3-203ENST00000491165 POU5F2Q8N7G0 328 aa22.78■■□□□ 1.24
USF3-203ENST00000491165 NR1H4Q96RI1 486 aaPredicted RBP22.78■■□□□ 1.24
USF3-203ENST00000491165 IL12RB2Q99665 862 aa22.78■■□□□ 1.24
USF3-203ENST00000491165 SNX15Q9NRS6 342 aa22.78■■□□□ 1.24
USF3-203ENST00000491165 SMAD6O43541 496 aaKnown RBP22.78■■□□□ 1.24
USF3-203ENST00000491165 HLA-DQB2P05538 268 aa22.78■■□□□ 1.24
USF3-203ENST00000491165 SLC12A1Q13621 1099 aa22.78■■□□□ 1.24
USF3-203ENST00000491165 TIGD7Q6NT04 549 aaPredicted RBP22.78■■□□□ 1.24
USF3-203ENST00000491165 CES3Q6UWW8 571 aa22.78■■□□□ 1.24
USF3-203ENST00000491165 ATG14Q6ZNE5 492 aa22.78■■□□□ 1.24
USF3-203ENST00000491165 CSGALNACT1Q8TDX6 532 aa22.78■■□□□ 1.24
USF3-203ENST00000491165 CYB5D2Q8WUJ1 264 aa22.78■■□□□ 1.24
USF3-203ENST00000491165 ECSITQ9BQ95 431 aa22.78■■□□□ 1.24
USF3-203ENST00000491165 USP34Q70CQ2 3546 aa22.77■■□□□ 1.24
USF3-203ENST00000491165 MUC22E2RYF6 1773 aaPredicted RBP22.77■■□□□ 1.24
USF3-203ENST00000491165 TTC24A2A3L6 582 aaPredicted RBP22.77■■□□□ 1.24
USF3-203ENST00000491165 SHISA7A6NL88 538 aa22.77■■□□□ 1.24
USF3-203ENST00000491165 ZBTB24O43167 697 aaPredicted RBP22.77■■□□□ 1.24
USF3-203ENST00000491165 CCNT2O60583 730 aaKnown RBP22.77■■□□□ 1.24
USF3-203ENST00000491165 SMIM24O75264 130 aa22.77■■□□□ 1.24
USF3-203ENST00000491165 CPA3P15088 417 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms