RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), human

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4A-256	ENST00000490663	SPARCL1	Q14515	664 aa		18.55	■□□□□ 0.56
C4A-256	ENST00000490663	CDKN3	Q16667	212 aa		18.55	■□□□□ 0.56
C4A-256	ENST00000490663	SIRPB2	Q5JXA9	342 aa		18.55	■□□□□ 0.56
C4A-256	ENST00000490663	ITPRIPL1	Q6GPH6	555 aa		18.55	■□□□□ 0.56
C4A-256	ENST00000490663	RAET1G	Q6H3X3	334 aa		18.55	■□□□□ 0.56
C4A-256	ENST00000490663	TECPR1	Q7Z6L1	1165 aa		18.55	■□□□□ 0.56
C4A-256	ENST00000490663	TRIM74	Q86UV6	250 aa		18.55	■□□□□ 0.56
C4A-256	ENST00000490663	PARG	Q86W56	976 aa		18.55	■□□□□ 0.56
C4A-256	ENST00000490663	CBARP	Q8N350	705 aa	Predicted RBP	18.55	■□□□□ 0.56
C4A-256	ENST00000490663	OXR1	Q8N573	874 aa		18.55	■□□□□ 0.56
C4A-256	ENST00000490663	TSACC	Q96A04	125 aa	Predicted RBP	18.55	■□□□□ 0.56
C4A-256	ENST00000490663	EID2B	Q96D98	161 aa		18.55	■□□□□ 0.56
C4A-256	ENST00000490663	ADGRE3	Q9BY15	652 aa		18.55	■□□□□ 0.56
C4A-256	ENST00000490663	RPL26L1	Q9UNX3	145 aa	Known RBP	18.55	■□□□□ 0.56
C4A-256	ENST00000490663	NCOR2	Q9Y618	2525 aa		18.54	■□□□□ 0.56
C4A-256	ENST00000490663	TMEM202	A6NGA9	273 aa		18.54	■□□□□ 0.56
C4A-256	ENST00000490663	FLRT2	O43155	660 aa		18.54	■□□□□ 0.56
C4A-256	ENST00000490663	PCDHGA12	O60330	932 aa		18.54	■□□□□ 0.56
C4A-256	ENST00000490663	USP12	O75317	370 aa		18.54	■□□□□ 0.56
C4A-256	ENST00000490663	PIAS2	O75928	621 aa		18.54	■□□□□ 0.56
C4A-256	ENST00000490663	STK10	O94804	968 aa	Known RBP	18.54	■□□□□ 0.56
C4A-256	ENST00000490663	AGT	P01019	485 aa		18.54	■□□□□ 0.56
C4A-256	ENST00000490663	FGG	P02679	453 aa		18.54	■□□□□ 0.56
C4A-256	ENST00000490663	CELA2B	P08218	269 aa	Predicted RBP	18.54	■□□□□ 0.56
C4A-256	ENST00000490663	ETS1	P14921	441 aa		18.54	■□□□□ 0.56
C4A-256	ENST00000490663	CSRP1	P21291	193 aa	Known RBP	18.54	■□□□□ 0.56
C4A-256	ENST00000490663	RXRG	P48443	463 aa		18.54	■□□□□ 0.56
C4A-256	ENST00000490663	C1orf61	Q13536	156 aa		18.54	■□□□□ 0.56
C4A-256	ENST00000490663	NFATC4	Q14934	902 aa		18.54	■□□□□ 0.56
C4A-256	ENST00000490663	SLC14A2	Q15849	920 aa		18.54	■□□□□ 0.56
C4A-256	ENST00000490663	ALS2CL	Q60I27	953 aa		18.54	■□□□□ 0.56
C4A-256	ENST00000490663	ESRP1	Q6NXG1	681 aa	Known RBP	18.54	■□□□□ 0.56
C4A-256	ENST00000490663	PNCK	Q6P2M8	343 aa		18.54	■□□□□ 0.56
C4A-256	ENST00000490663	ENPP7	Q6UWV6	458 aa		18.54	■□□□□ 0.56
C4A-256	ENST00000490663	MACC1	Q6ZN28	852 aa		18.54	■□□□□ 0.56
C4A-256	ENST00000490663	RD3	Q7Z3Z2	195 aa		18.54	■□□□□ 0.56
C4A-256	ENST00000490663	HEATR4	Q86WZ0	1026 aa		18.54	■□□□□ 0.56
C4A-256	ENST00000490663	PHACTR4	Q8IZ21	702 aa		18.54	■□□□□ 0.56
C4A-256	ENST00000490663	C17orf53	Q8N3J3	647 aa	Predicted RBP	18.54	■□□□□ 0.56
C4A-256	ENST00000490663	PTCD2	Q8WV60	388 aa	Known RBP	18.54	■□□□□ 0.56
C4A-256	ENST00000490663	PDXP	Q96GD0	296 aa		18.54	■□□□□ 0.56
C4A-256	ENST00000490663	MS4A14	Q96JA4	679 aa		18.54	■□□□□ 0.56
C4A-256	ENST00000490663	RIOK2	Q9BVS4	552 aa	Known RBP	18.54	■□□□□ 0.56
C4A-256	ENST00000490663	SLC32A1	Q9H598	525 aa		18.54	■□□□□ 0.56
C4A-256	ENST00000490663	MRPL40	Q9NQ50	206 aa	Known RBP	18.54	■□□□□ 0.56
C4A-256	ENST00000490663	PCDHGB2	Q9Y5G2	931 aa		18.54	■□□□□ 0.56
C4A-256	ENST00000490663	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	18.54	■□□□□ 0.56
C4A-256	ENST00000490663	SPEG	Q15772	3267 aa		18.54	■□□□□ 0.56
C4A-256	ENST00000490663	UNC13C	Q8NB66	2214 aa		18.53	■□□□□ 0.56
C4A-256	ENST00000490663	AKAP13	Q12802	2813 aa		18.53	■□□□□ 0.56
C4A-256	ENST00000490663	PSMD11	O00231	422 aa		18.53	■□□□□ 0.56
C4A-256	ENST00000490663	BUD23	O43709	281 aa	Known RBP	18.53	■□□□□ 0.56
C4A-256	ENST00000490663	DFNA5	O60443	496 aa		18.53	■□□□□ 0.56
C4A-256	ENST00000490663	CBFA2T3	O75081	653 aa		18.53	■□□□□ 0.56
C4A-256	ENST00000490663	METTL18	O95568	372 aa		18.53	■□□□□ 0.56
C4A-256	ENST00000490663	SOD1	P00441	154 aa		18.53	■□□□□ 0.56
C4A-256	ENST00000490663	MYF5	P13349	255 aa		18.53	■□□□□ 0.56
C4A-256	ENST00000490663	ZNF30	P17039	623 aa		18.53	■□□□□ 0.56
C4A-256	ENST00000490663	JUND	P17535	347 aa		18.53	■□□□□ 0.56
C4A-256	ENST00000490663	DGKA	P23743	735 aa		18.53	■□□□□ 0.56
C4A-256	ENST00000490663	YPEL5	P62699	121 aa		18.53	■□□□□ 0.56
C4A-256	ENST00000490663	SIM1	P81133	766 aa	Predicted RBP	18.53	■□□□□ 0.56
C4A-256	ENST00000490663	CCDC173	Q0VFZ6	552 aa		18.53	■□□□□ 0.56
C4A-256	ENST00000490663	MPP3	Q13368	585 aa		18.53	■□□□□ 0.56
C4A-256	ENST00000490663	OASL	Q15646	514 aa	Known RBP	18.53	■□□□□ 0.56
C4A-256	ENST00000490663	ALG11	Q2TAA5	492 aa		18.53	■□□□□ 0.56
C4A-256	ENST00000490663	CCDC157	Q569K6	752 aa		18.53	■□□□□ 0.56
C4A-256	ENST00000490663	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	18.53	■□□□□ 0.56
C4A-256	ENST00000490663	DOK6	Q6PKX4	331 aa		18.53	■□□□□ 0.56
C4A-256	ENST00000490663	ARHGEF18	Q6ZSZ5	1173 aa		18.53	■□□□□ 0.56
C4A-256	ENST00000490663	DCP2	Q8IU60	420 aa	Known RBP	18.53	■□□□□ 0.56
C4A-256	ENST00000490663	HID1	Q8IV36	788 aa		18.53	■□□□□ 0.56
C4A-256	ENST00000490663	SLC25A45	Q8N413	288 aa		18.53	■□□□□ 0.56
C4A-256	ENST00000490663	GLIS1	Q8NBF1	620 aa		18.53	■□□□□ 0.56
C4A-256	ENST00000490663	BAHD1	Q8TBE0	780 aa	Predicted RBP	18.53	■□□□□ 0.56
C4A-256	ENST00000490663	FAM174A	Q8TBP5	190 aa		18.53	■□□□□ 0.56
C4A-256	ENST00000490663	OR1E3	Q8WZA6	343 aa		18.53	■□□□□ 0.56
C4A-256	ENST00000490663	AP2M1	Q96CW1	435 aa		18.53	■□□□□ 0.56
C4A-256	ENST00000490663	WDR24	Q96S15	920 aa		18.53	■□□□□ 0.56
C4A-256	ENST00000490663	LYSMD1	Q96S90	227 aa		18.53	■□□□□ 0.56
C4A-256	ENST00000490663	FERMT1	Q9BQL6	677 aa		18.53	■□□□□ 0.56
C4A-256	ENST00000490663	FSD1L	Q9BXM9	530 aa		18.53	■□□□□ 0.56
C4A-256	ENST00000490663	FGF22	Q9HCT0	170 aa		18.53	■□□□□ 0.56
C4A-256	ENST00000490663	BPIFA1	Q9NP55	256 aa		18.53	■□□□□ 0.56
C4A-256	ENST00000490663	MOSPD1	Q9UJG1	213 aa		18.53	■□□□□ 0.56
C4A-256	ENST00000490663	LOC285095	A0A1B0GVY8	99 aa		18.52	■□□□□ 0.56
C4A-256	ENST00000490663	INPP4B	O15327	924 aa		18.52	■□□□□ 0.56
C4A-256	ENST00000490663	CSF2	P04141	144 aa		18.52	■□□□□ 0.56
C4A-256	ENST00000490663	NME1	P15531	152 aa	Known RBP	18.52	■□□□□ 0.56
C4A-256	ENST00000490663	GRK6	P43250	576 aa		18.52	■□□□□ 0.56
C4A-256	ENST00000490663	GPR1	P46091	355 aa		18.52	■□□□□ 0.56
C4A-256	ENST00000490663	GEM	P55040	296 aa		18.52	■□□□□ 0.56
C4A-256	ENST00000490663	SUZ12	Q15022	739 aa	Known RBP	18.52	■□□□□ 0.56
C4A-256	ENST00000490663	SLC1A5	Q15758	541 aa		18.52	■□□□□ 0.56
C4A-256	ENST00000490663	LONRF2	Q1L5Z9	754 aa		18.52	■□□□□ 0.56
C4A-256	ENST00000490663	DBX2	Q6ZNG2	339 aa		18.52	■□□□□ 0.56
C4A-256	ENST00000490663	MICALCL	Q6ZW33	695 aa		18.52	■□□□□ 0.56
C4A-256	ENST00000490663	ZNF548	Q8NEK5	533 aa	Predicted RBP	18.52	■□□□□ 0.56
C4A-256	ENST00000490663	BLOC1S5	Q8TDH9	187 aa		18.52	■□□□□ 0.56
C4A-256	ENST00000490663	LMX1A	Q8TE12	382 aa		18.52	■□□□□ 0.56

Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms