RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 SH3BP2P78314 561 aa13.64□□□□□ -0.23
EXOSC3-207ENST00000490516 SLC6A3Q01959 620 aa13.64□□□□□ -0.23
EXOSC3-207ENST00000490516 GCNT1Q02742 428 aa13.64□□□□□ -0.23
EXOSC3-207ENST00000490516 FOXD4L6Q3SYB3 417 aaPredicted RBP13.64□□□□□ -0.23
EXOSC3-207ENST00000490516 FOXD4L3Q6VB84 417 aaPredicted RBP13.64□□□□□ -0.23
EXOSC3-207ENST00000490516 LIPIQ6XZB0 460 aa13.64□□□□□ -0.23
EXOSC3-207ENST00000490516 GDF7Q7Z4P5 450 aa13.64□□□□□ -0.23
EXOSC3-207ENST00000490516 RASGRP3Q8IV61 690 aa13.64□□□□□ -0.23
EXOSC3-207ENST00000490516 PASD1Q8IV76 773 aa13.64□□□□□ -0.23
EXOSC3-207ENST00000490516 RHOT1Q8IXI2 618 aa13.64□□□□□ -0.23
EXOSC3-207ENST00000490516 IQCKQ8N0W5 287 aa13.64□□□□□ -0.23
EXOSC3-207ENST00000490516 MMP21Q8N119 569 aa13.64□□□□□ -0.23
EXOSC3-207ENST00000490516 FDCSPQ8NFU4 85 aa13.64□□□□□ -0.23
EXOSC3-207ENST00000490516 THAP4Q8WY91 577 aa13.64□□□□□ -0.23
EXOSC3-207ENST00000490516 CCDC47Q96A33 483 aaKnown RBP13.64□□□□□ -0.23
EXOSC3-207ENST00000490516 FRMD8Q9BZ67 464 aaPredicted RBP13.64□□□□□ -0.23
EXOSC3-207ENST00000490516 GTPBP4Q9BZE4 634 aaKnown RBP13.64□□□□□ -0.23
EXOSC3-207ENST00000490516 SUV39H2Q9H5I1 410 aa13.64□□□□□ -0.23
EXOSC3-207ENST00000490516 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.64□□□□□ -0.23
EXOSC3-207ENST00000490516 PPARGC1AQ9UBK2 798 aaKnown RBP13.64□□□□□ -0.23
EXOSC3-207ENST00000490516 LNPEPQ9UIQ6 1025 aa13.64□□□□□ -0.23
EXOSC3-207ENST00000490516 PADI1Q9ULC6 663 aa13.64□□□□□ -0.23
EXOSC3-207ENST00000490516 PCDHGB7Q9Y5F8 929 aa13.64□□□□□ -0.23
EXOSC3-207ENST00000490516 ABCA2Q9BZC7 2435 aa13.64□□□□□ -0.23
EXOSC3-207ENST00000490516 PKDREJQ9NTG1 2253 aa13.64□□□□□ -0.23
EXOSC3-207ENST00000490516 A8MX80 341 aa13.63□□□□□ -0.23
EXOSC3-207ENST00000490516 KDELR3O43731 214 aa13.63□□□□□ -0.23
EXOSC3-207ENST00000490516 CEACAM4O75871 244 aa13.63□□□□□ -0.23
EXOSC3-207ENST00000490516 EML2O95834 649 aa13.63□□□□□ -0.23
EXOSC3-207ENST00000490516 MYL1P05976 194 aa13.63□□□□□ -0.23
EXOSC3-207ENST00000490516 ELFN1P0C7U0 828 aa13.63□□□□□ -0.23
EXOSC3-207ENST00000490516 HOXB4P17483 251 aaPredicted RBP13.63□□□□□ -0.23
EXOSC3-207ENST00000490516 GNA15P30679 374 aa13.63□□□□□ -0.23
EXOSC3-207ENST00000490516 PTGIRP43119 386 aa13.63□□□□□ -0.23
EXOSC3-207ENST00000490516 NFATC2Q13469 925 aa13.63□□□□□ -0.23
EXOSC3-207ENST00000490516 IL10RAQ13651 578 aa13.63□□□□□ -0.23
EXOSC3-207ENST00000490516 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.63□□□□□ -0.23
EXOSC3-207ENST00000490516 ACBD5Q5T8D3 534 aaPredicted RBP13.63□□□□□ -0.23
EXOSC3-207ENST00000490516 SPNS3Q6ZMD2 512 aa13.63□□□□□ -0.23
EXOSC3-207ENST00000490516 ZNF354CQ86Y25 554 aa13.63□□□□□ -0.23
EXOSC3-207ENST00000490516 HCAR2Q8TDS4 363 aa13.63□□□□□ -0.23
EXOSC3-207ENST00000490516 NT5C3BQ969T7 300 aa13.63□□□□□ -0.23
EXOSC3-207ENST00000490516 PGAP3Q96FM1 320 aaPredicted RBP13.63□□□□□ -0.23
EXOSC3-207ENST00000490516 OR6C1Q96RD1 312 aa13.63□□□□□ -0.23
EXOSC3-207ENST00000490516 KLC2Q9H0B6 622 aa13.63□□□□□ -0.23
EXOSC3-207ENST00000490516 MAGEH1Q9H213 219 aa13.63□□□□□ -0.23
EXOSC3-207ENST00000490516 AKIRIN1Q9H9L7 192 aaPredicted RBP13.63□□□□□ -0.23
EXOSC3-207ENST00000490516 UPF2Q9HAU5 1272 aaKnown RBP13.63□□□□□ -0.23
EXOSC3-207ENST00000490516 LHX9Q9NQ69 397 aa13.63□□□□□ -0.23
EXOSC3-207ENST00000490516 LHX3Q9UBR4 397 aa13.63□□□□□ -0.23
EXOSC3-207ENST00000490516 ARMCX3Q9UH62 379 aaPredicted RBP13.63□□□□□ -0.23
EXOSC3-207ENST00000490516 ZGRF1Q86YA3 2104 aa13.63□□□□□ -0.23
EXOSC3-207ENST00000490516 CFAP69A5D8W1 941 aa13.62□□□□□ -0.23
EXOSC3-207ENST00000490516 A6NL46 340 aa13.62□□□□□ -0.23
EXOSC3-207ENST00000490516 F9P00740 461 aa13.62□□□□□ -0.23
EXOSC3-207ENST00000490516 SNRPB2P08579 225 aaKnown RBP13.62□□□□□ -0.23
EXOSC3-207ENST00000490516 NDST2P52849 883 aa13.62□□□□□ -0.23
EXOSC3-207ENST00000490516 PER3P56645 1201 aa13.62□□□□□ -0.23
EXOSC3-207ENST00000490516 PEX6Q13608 980 aa13.62□□□□□ -0.23
EXOSC3-207ENST00000490516 ACOX1Q15067 660 aa13.62□□□□□ -0.23
EXOSC3-207ENST00000490516 CFAP58Q5T655 872 aa13.62□□□□□ -0.23
EXOSC3-207ENST00000490516 RWDD4Q6NW29 188 aaKnown RBP13.62□□□□□ -0.23
EXOSC3-207ENST00000490516 PHLDB2Q86SQ0 1253 aa13.62□□□□□ -0.23
EXOSC3-207ENST00000490516 NLRP14Q86W24 1093 aa13.62□□□□□ -0.23
EXOSC3-207ENST00000490516 CAMK1DQ8IU85 385 aa13.62□□□□□ -0.23
EXOSC3-207ENST00000490516 SFRP1Q8N474 314 aa13.62□□□□□ -0.23
EXOSC3-207ENST00000490516 ZNF397Q8NF99 534 aaPredicted RBP13.62□□□□□ -0.23
EXOSC3-207ENST00000490516 TEX101Q9BY14 249 aa13.62□□□□□ -0.23
EXOSC3-207ENST00000490516 PHPT1Q9NRX4 125 aaPredicted RBP13.62□□□□□ -0.23
EXOSC3-207ENST00000490516 STAP1Q9ULZ2 295 aa13.62□□□□□ -0.23
EXOSC3-207ENST00000490516 ANKHD1Q8IWZ3 2542 aaKnown RBP13.62□□□□□ -0.23
EXOSC3-207ENST00000490516 A0A1B0GVL5 298 aa13.61□□□□□ -0.23
EXOSC3-207ENST00000490516 C21orf140B9A014 251 aa13.61□□□□□ -0.23
EXOSC3-207ENST00000490516 ZNF185O15231 689 aa13.61□□□□□ -0.23
EXOSC3-207ENST00000490516 RAMP2O60895 175 aa13.61□□□□□ -0.23
EXOSC3-207ENST00000490516 SPAG6O75602 509 aa13.61□□□□□ -0.23
EXOSC3-207ENST00000490516 ANKRD34CP0C6C1 535 aa13.61□□□□□ -0.23
EXOSC3-207ENST00000490516 PFKFB1P16118 471 aa13.61□□□□□ -0.23
EXOSC3-207ENST00000490516 ITGA3P26006 1051 aa13.61□□□□□ -0.23
EXOSC3-207ENST00000490516 ERCC5P28715 1186 aaPredicted RBP13.61□□□□□ -0.23
EXOSC3-207ENST00000490516 MAPKAPK2P49137 400 aa13.61□□□□□ -0.23
EXOSC3-207ENST00000490516 SEPHS1P49903 392 aa13.61□□□□□ -0.23
EXOSC3-207ENST00000490516 GFERP55789 205 aa13.61□□□□□ -0.23
EXOSC3-207ENST00000490516 HHEXQ03014 270 aa13.61□□□□□ -0.23
EXOSC3-207ENST00000490516 FOXD4L5Q5VV16 416 aaPredicted RBP13.61□□□□□ -0.23
EXOSC3-207ENST00000490516 FAM199XQ6PEV8 388 aaPredicted RBP13.61□□□□□ -0.23
EXOSC3-207ENST00000490516 BRAT1Q6PJG6 821 aa13.61□□□□□ -0.23
EXOSC3-207ENST00000490516 DOK6Q6PKX4 331 aa13.61□□□□□ -0.23
EXOSC3-207ENST00000490516 FAM131BQ86XD5 332 aa13.61□□□□□ -0.23
EXOSC3-207ENST00000490516 C1orf131Q8NDD1 294 aaKnown RBP13.61□□□□□ -0.23
EXOSC3-207ENST00000490516 FOXD4L4Q8WXT5 416 aaPredicted RBP13.61□□□□□ -0.23
EXOSC3-207ENST00000490516 BRD8Q9H0E9 1235 aa13.61□□□□□ -0.23
EXOSC3-207ENST00000490516 NTNG1Q9Y2I2 539 aa13.61□□□□□ -0.23
EXOSC3-207ENST00000490516 GOLGA6L3A6NEY3 463 aa13.6□□□□□ -0.23
EXOSC3-207ENST00000490516 F5H423 210 aaPredicted RBP13.6□□□□□ -0.23
EXOSC3-207ENST00000490516 TIAF1O95411 115 aa13.6□□□□□ -0.23
EXOSC3-207ENST00000490516 RHOQP17081 205 aa13.6□□□□□ -0.23
EXOSC3-207ENST00000490516 PTPN4P29074 926 aa13.6□□□□□ -0.23
EXOSC3-207ENST00000490516 PMS1P54277 932 aaKnown RBP13.6□□□□□ -0.23
EXOSC3-207ENST00000490516 CDK3Q00526 305 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms