RNA–Protein interactions for RNA: ENST00000490441.1

DUBR-204, DPPA2 upstream binding RNA, humanhuman

TSL 1 (best) BASIC

Gene DUBR, Length 1,149 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-204ENST00000490441 WBP1Q96G27 269 aa11.25□□□□□ -0.61
DUBR-204ENST00000490441 COQ10AQ96MF6 247 aa11.25□□□□□ -0.61
DUBR-204ENST00000490441 NUP85Q9BW27 656 aa11.25□□□□□ -0.61
DUBR-204ENST00000490441 LGR4Q9BXB1 951 aa11.25□□□□□ -0.61
DUBR-204ENST00000490441 THAP2Q9H0W7 228 aa11.25□□□□□ -0.61
DUBR-204ENST00000490441 NOD2Q9HC29 1040 aa11.25□□□□□ -0.61
DUBR-204ENST00000490441 PCDH18Q9HCL0 1135 aa11.25□□□□□ -0.61
DUBR-204ENST00000490441 HAUS2Q9NVX0 235 aa11.25□□□□□ -0.61
DUBR-204ENST00000490441 AKAP7Q9P0M2 348 aaPredicted RBP11.25□□□□□ -0.61
DUBR-204ENST00000490441 LRIT1Q9P2V4 623 aa11.25□□□□□ -0.61
DUBR-204ENST00000490441 PISDQ9UG56 409 aa11.25□□□□□ -0.61
DUBR-204ENST00000490441 LOXL2Q9Y4K0 774 aa11.25□□□□□ -0.61
DUBR-204ENST00000490441 PCDHGA7Q9Y5G6 932 aa11.25□□□□□ -0.61
DUBR-204ENST00000490441 A0A1W2PQJ5 194 aa11.24□□□□□ -0.61
DUBR-204ENST00000490441 RHPN2P1A8MT19 583 aa11.24□□□□□ -0.61
DUBR-204ENST00000490441 K7ENP7 123 aa11.24□□□□□ -0.61
DUBR-204ENST00000490441 MYO1FO00160 1098 aa11.24□□□□□ -0.61
DUBR-204ENST00000490441 PSMD11O00231 422 aa11.24□□□□□ -0.61
DUBR-204ENST00000490441 NUDT21O43809 227 aaKnown RBP11.24□□□□□ -0.61
DUBR-204ENST00000490441 PGLSO95336 258 aa11.24□□□□□ -0.61
DUBR-204ENST00000490441 PEX11BO96011 259 aa11.24□□□□□ -0.61
DUBR-204ENST00000490441 SERPING1P05155 500 aa11.24□□□□□ -0.61
DUBR-204ENST00000490441 CCNB1P14635 433 aa11.24□□□□□ -0.61
DUBR-204ENST00000490441 GM2AP17900 193 aa11.24□□□□□ -0.61
DUBR-204ENST00000490441 SLC5A2P31639 672 aa11.24□□□□□ -0.61
DUBR-204ENST00000490441 ETV3P41162 512 aa11.24□□□□□ -0.61
DUBR-204ENST00000490441 GNPDA1P46926 289 aa11.24□□□□□ -0.61
DUBR-204ENST00000490441 CDK3Q00526 305 aa11.24□□□□□ -0.61
DUBR-204ENST00000490441 TRAF2Q12933 501 aa11.24□□□□□ -0.61
DUBR-204ENST00000490441 CLN3Q13286 438 aa11.24□□□□□ -0.61
DUBR-204ENST00000490441 HLTFQ14527 1009 aaKnown RBP eCLIP11.24□□□□□ -0.61
DUBR-204ENST00000490441 IQCB1Q15051 598 aa11.24□□□□□ -0.61
DUBR-204ENST00000490441 HADHQ16836 314 aaKnown RBP11.24□□□□□ -0.61
DUBR-204ENST00000490441 CCDC122Q5T0U0 273 aa11.24□□□□□ -0.61
DUBR-204ENST00000490441 PHF19Q5T6S3 580 aa11.24□□□□□ -0.61
DUBR-204ENST00000490441 INO80CQ6PI98 192 aaPredicted RBP11.24□□□□□ -0.61
DUBR-204ENST00000490441 SPRED1Q7Z699 444 aa11.24□□□□□ -0.61
DUBR-204ENST00000490441 PELI3Q8N2H9 469 aa11.24□□□□□ -0.61
DUBR-204ENST00000490441 PGBD5Q8N414 524 aa11.24□□□□□ -0.61
DUBR-204ENST00000490441 ZNF843Q8N446 348 aa11.24□□□□□ -0.61
DUBR-204ENST00000490441 CCL4L1Q8NHW4 92 aa11.24□□□□□ -0.61
DUBR-204ENST00000490441 SNRNP27Q8WVK2 155 aaKnown RBP11.24□□□□□ -0.61
DUBR-204ENST00000490441 SYN2Q92777 582 aaPredicted RBP11.24□□□□□ -0.61
DUBR-204ENST00000490441 TMEM159Q96B96 161 aa11.24□□□□□ -0.61
DUBR-204ENST00000490441 IQCDQ96DY2 449 aa11.24□□□□□ -0.61
DUBR-204ENST00000490441 SCRN2Q96FV2 425 aa11.24□□□□□ -0.61
DUBR-204ENST00000490441 BTBD6Q96KE9 485 aa11.24□□□□□ -0.61
DUBR-204ENST00000490441 NSMCE3Q96MG7 304 aa11.24□□□□□ -0.61
DUBR-204ENST00000490441 CCNL2Q96S94 520 aaPredicted RBP11.24□□□□□ -0.61
DUBR-204ENST00000490441 CMKLR1Q99788 373 aa11.24□□□□□ -0.61
DUBR-204ENST00000490441 TEX101Q9BY14 249 aa11.24□□□□□ -0.61
DUBR-204ENST00000490441 POLR1EQ9GZS1 481 aaKnown RBP11.24□□□□□ -0.61
DUBR-204ENST00000490441 NT5MQ9NPB1 228 aa11.24□□□□□ -0.61
DUBR-204ENST00000490441 TRNAU1APQ9NX07 287 aaKnown RBP11.24□□□□□ -0.61
DUBR-204ENST00000490441 RCOR3Q9P2K3 495 aaPredicted RBP11.24□□□□□ -0.61
DUBR-204ENST00000490441 ATXN7L1Q9ULK2 861 aaPredicted RBP11.24□□□□□ -0.61
DUBR-204ENST00000490441 RNF215Q9Y6U7 377 aa11.24□□□□□ -0.61
DUBR-204ENST00000490441 NPIPB15A6NHN6 443 aaPredicted RBP11.23□□□□□ -0.61
DUBR-204ENST00000490441 GOLGA6L19H0YKK7 550 aa11.23□□□□□ -0.61
DUBR-204ENST00000490441 AGRPO00253 132 aa11.23□□□□□ -0.61
DUBR-204ENST00000490441 HGFP14210 728 aa11.23□□□□□ -0.61
DUBR-204ENST00000490441 CTPS1P17812 591 aa11.23□□□□□ -0.61
DUBR-204ENST00000490441 CA4P22748 312 aa11.23□□□□□ -0.61
DUBR-204ENST00000490441 LHCGRP22888 699 aa11.23□□□□□ -0.61
DUBR-204ENST00000490441 TEAD1P28347 426 aa11.23□□□□□ -0.61
DUBR-204ENST00000490441 GJC1P36383 396 aa11.23□□□□□ -0.61
DUBR-204ENST00000490441 GPR1P46091 355 aa11.23□□□□□ -0.61
DUBR-204ENST00000490441 EPHB1P54762 984 aa11.23□□□□□ -0.61
DUBR-204ENST00000490441 MAZP56270 477 aaKnown RBP11.23□□□□□ -0.61
DUBR-204ENST00000490441 UBASH3AP57075 661 aa11.23□□□□□ -0.61
DUBR-204ENST00000490441 ZBED6P86452 979 aa11.23□□□□□ -0.61
DUBR-204ENST00000490441 FANCCQ00597 558 aa11.23□□□□□ -0.61
DUBR-204ENST00000490441 SLC25A11Q02978 314 aaKnown RBP11.23□□□□□ -0.61
DUBR-204ENST00000490441 AMZ1Q400G9 498 aa11.23□□□□□ -0.61
DUBR-204ENST00000490441 HGSNATQ68CP4 663 aa11.23□□□□□ -0.61
DUBR-204ENST00000490441 TXNRD3NBQ6F5E7 133 aa11.23□□□□□ -0.61
DUBR-204ENST00000490441 TIGD7Q6NT04 549 aaPredicted RBP11.23□□□□□ -0.61
DUBR-204ENST00000490441 DOK6Q6PKX4 331 aa11.23□□□□□ -0.61
DUBR-204ENST00000490441 Q6ZVL8 140 aa11.23□□□□□ -0.61
DUBR-204ENST00000490441 HSD11B1LQ7Z5J1 315 aa11.23□□□□□ -0.61
DUBR-204ENST00000490441 GPBAR1Q8TDU6 330 aa11.23□□□□□ -0.61
DUBR-204ENST00000490441 ZDHHC1Q8WTX9 485 aa11.23□□□□□ -0.61
DUBR-204ENST00000490441 CPLX3Q8WVH0 158 aa11.23□□□□□ -0.61
DUBR-204ENST00000490441 MCCC1Q96RQ3 725 aaPredicted RBP11.23□□□□□ -0.61
DUBR-204ENST00000490441 SEMA3CQ99985 751 aa11.23□□□□□ -0.61
DUBR-204ENST00000490441 FRMD8Q9BZ67 464 aaPredicted RBP11.23□□□□□ -0.61
DUBR-204ENST00000490441 CDH19Q9H159 772 aa11.23□□□□□ -0.61
DUBR-204ENST00000490441 SEPT10Q9P0V9 454 aa11.23□□□□□ -0.61
DUBR-204ENST00000490441 TAAR2Q9P1P5 351 aa11.23□□□□□ -0.61
DUBR-204ENST00000490441 DNPEPQ9ULA0 475 aa11.23□□□□□ -0.61
DUBR-204ENST00000490441 SUFUQ9UMX1 484 aa11.23□□□□□ -0.61
DUBR-204ENST00000490441 TTLL3Q9Y4R7 772 aa11.23□□□□□ -0.61
DUBR-204ENST00000490441 FLNBO75369 2602 aaKnown RBP11.23□□□□□ -0.61
DUBR-204ENST00000490441 PIEZO2Q9H5I5 2752 aa11.23□□□□□ -0.61
DUBR-204ENST00000490441 CFAP46Q8IYW2 2715 aa11.22□□□□□ -0.61
DUBR-204ENST00000490441 NVLO15381 856 aaKnown RBP11.22□□□□□ -0.61
DUBR-204ENST00000490441 MFSD11O43934 449 aa11.22□□□□□ -0.61
DUBR-204ENST00000490441 CPNE6O95741 557 aa11.22□□□□□ -0.61
DUBR-204ENST00000490441 CYP1A2P05177 515 aa11.22□□□□□ -0.61
DUBR-204ENST00000490441 CEACAM5P06731 702 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms