RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 TFAP4Q01664 338 aa3.97□□□□□ -1.77
CD46-216ENST00000490278 MC1RQ01726 317 aa3.97□□□□□ -1.77
CD46-216ENST00000490278 NAB2Q15742 525 aa3.97□□□□□ -1.77
CD46-216ENST00000490278 EIF2S3LQ2VIR3 472 aaKnown RBP3.97□□□□□ -1.77
CD46-216ENST00000490278 ZSCAN23Q3MJ62 389 aa3.97□□□□□ -1.77
CD46-216ENST00000490278 CDONQ4KMG0 1287 aa3.97□□□□□ -1.77
CD46-216ENST00000490278 SOWAHCQ53LP3 525 aaPredicted RBP3.97□□□□□ -1.77
CD46-216ENST00000490278 SIGIRRQ6IA17 410 aa3.97□□□□□ -1.77
CD46-216ENST00000490278 SEPT14Q6ZU15 432 aa3.97□□□□□ -1.77
CD46-216ENST00000490278 DPPA4Q7L190 304 aa3.97□□□□□ -1.77
CD46-216ENST00000490278 CHST9Q7L1S5 443 aa3.97□□□□□ -1.77
CD46-216ENST00000490278 TAOK1Q7L7X3 1001 aa3.97□□□□□ -1.77
CD46-216ENST00000490278 FJX1Q86VR8 437 aa3.97□□□□□ -1.77
CD46-216ENST00000490278 ADGRF2Q8IZF7 708 aa3.97□□□□□ -1.77
CD46-216ENST00000490278 DSELQ8IZU8 1212 aa3.97□□□□□ -1.77
CD46-216ENST00000490278 FAM216AQ8WUB2 273 aa3.97□□□□□ -1.77
CD46-216ENST00000490278 ZKSCAN4Q969J2 545 aaPredicted RBP3.97□□□□□ -1.77
CD46-216ENST00000490278 MIB2Q96AX9 1013 aa3.97□□□□□ -1.77
CD46-216ENST00000490278 ZBTB9Q96C00 473 aa3.97□□□□□ -1.77
CD46-216ENST00000490278 ACOX2Q99424 681 aa3.97□□□□□ -1.77
CD46-216ENST00000490278 SEPT5Q99719 369 aaPredicted RBP3.97□□□□□ -1.77
CD46-216ENST00000490278 KXD1Q9BQD3 176 aa3.97□□□□□ -1.77
CD46-216ENST00000490278 PCGF1Q9BSM1 259 aa3.97□□□□□ -1.77
CD46-216ENST00000490278 KCNN2Q9H2S1 579 aa3.97□□□□□ -1.77
CD46-216ENST00000490278 SMARCAD1Q9H4L7 1026 aa3.97□□□□□ -1.77
CD46-216ENST00000490278 CNGB3Q9NQW8 809 aa3.97□□□□□ -1.77
CD46-216ENST00000490278 NSMCE4AQ9NXX6 385 aa3.97□□□□□ -1.77
CD46-216ENST00000490278 TBC1D29Q9UFV1 150 aa3.97□□□□□ -1.77
CD46-216ENST00000490278 TTC7AQ9ULT0 858 aaPredicted RBP3.97□□□□□ -1.77
CD46-216ENST00000490278 SESN1Q9Y6P5 492 aa3.97□□□□□ -1.77
CD46-216ENST00000490278 RSF1Q96T23 1441 aaPredicted RBP3.96□□□□□ -1.77
CD46-216ENST00000490278 A0A0U1RQJ8 604 aa3.96□□□□□ -1.78
CD46-216ENST00000490278 C1orf226A1L170 272 aa3.96□□□□□ -1.78
CD46-216ENST00000490278 LINC01553A4QN01 128 aa3.96□□□□□ -1.78
CD46-216ENST00000490278 BTBD18B2RXH4 712 aa3.96□□□□□ -1.78
CD46-216ENST00000490278 KCNJ13O60928 360 aa3.96□□□□□ -1.78
CD46-216ENST00000490278 NDUFS7O75251 213 aa3.96□□□□□ -1.78
CD46-216ENST00000490278 JRKO75564 520 aa3.96□□□□□ -1.78
CD46-216ENST00000490278 CLTBP09497 229 aa3.96□□□□□ -1.78
CD46-216ENST00000490278 TMEM11P17152 192 aa3.96□□□□□ -1.78
CD46-216ENST00000490278 MCM3P25205 808 aa3.96□□□□□ -1.78
CD46-216ENST00000490278 HOXC9P31274 260 aa3.96□□□□□ -1.78
CD46-216ENST00000490278 GARSP41250 739 aaKnown RBP3.96□□□□□ -1.78
CD46-216ENST00000490278 GALCP54803 685 aa3.96□□□□□ -1.78
CD46-216ENST00000490278 CDH8P55286 799 aa3.96□□□□□ -1.78
CD46-216ENST00000490278 NLRP5P59047 1200 aa3.96□□□□□ -1.78
CD46-216ENST00000490278 CREB5Q02930 508 aa3.96□□□□□ -1.78
CD46-216ENST00000490278 AIMP2Q13155 320 aaKnown RBP3.96□□□□□ -1.78
CD46-216ENST00000490278 CUL4AQ13619 759 aa3.96□□□□□ -1.78
CD46-216ENST00000490278 PLCB4Q15147 1175 aa3.96□□□□□ -1.78
CD46-216ENST00000490278 AMZ1Q400G9 498 aa3.96□□□□□ -1.78
CD46-216ENST00000490278 DUSP28Q4G0W2 176 aa3.96□□□□□ -1.78
CD46-216ENST00000490278 FAM69BQ5VUD6 431 aa3.96□□□□□ -1.78
CD46-216ENST00000490278 JADE1Q6IE81 842 aa3.96□□□□□ -1.78
CD46-216ENST00000490278 PDXDC1Q6P996 788 aa3.96□□□□□ -1.78
CD46-216ENST00000490278 CRELD2Q6UXH1 353 aaPredicted RBP3.96□□□□□ -1.78
CD46-216ENST00000490278 CACNA2D4Q7Z3S7 1137 aa3.96□□□□□ -1.78
CD46-216ENST00000490278 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.96□□□□□ -1.78
CD46-216ENST00000490278 TEX11Q8IYF3 940 aa3.96□□□□□ -1.78
CD46-216ENST00000490278 RNF168Q8IYW5 571 aaPredicted RBP3.96□□□□□ -1.78
CD46-216ENST00000490278 CLIP4Q8N3C7 705 aa3.96□□□□□ -1.78
CD46-216ENST00000490278 Q8N9P0 234 aaPredicted RBP3.96□□□□□ -1.78
CD46-216ENST00000490278 B4GALNT2Q8NHY0 566 aa3.96□□□□□ -1.78
CD46-216ENST00000490278 WASF1Q92558 559 aa3.96□□□□□ -1.78
CD46-216ENST00000490278 NSUN4Q96CB9 384 aaKnown RBP3.96□□□□□ -1.78
CD46-216ENST00000490278 PHF21BQ96EK2 531 aa3.96□□□□□ -1.78
CD46-216ENST00000490278 FAM120BQ96EK7 910 aaKnown RBP3.96□□□□□ -1.78
CD46-216ENST00000490278 PGAM5Q96HS1 289 aa3.96□□□□□ -1.78
CD46-216ENST00000490278 C17orf75Q9HAS0 396 aa3.96□□□□□ -1.78
CD46-216ENST00000490278 MMP25Q9NPA2 562 aa3.96□□□□□ -1.78
CD46-216ENST00000490278 LTB4R2Q9NPC1 389 aa3.96□□□□□ -1.78
CD46-216ENST00000490278 CWC15Q9P013 229 aaKnown RBP3.96□□□□□ -1.78
CD46-216ENST00000490278 WNT16Q9UBV4 365 aa3.96□□□□□ -1.78
CD46-216ENST00000490278 SLC9A2Q9UBY0 812 aa3.96□□□□□ -1.78
CD46-216ENST00000490278 SWAP70Q9UH65 585 aa3.96□□□□□ -1.78
CD46-216ENST00000490278 ZNF215Q9UL58 517 aaPredicted RBP3.96□□□□□ -1.78
CD46-216ENST00000490278 TNFRSF18Q9Y5U5 241 aa3.96□□□□□ -1.78
CD46-216ENST00000490278 IGLV5-52A0A0A0MRZ9 124 aa3.95□□□□□ -1.78
CD46-216ENST00000490278 hDV102S1A0JD36 115 aa3.95□□□□□ -1.78
CD46-216ENST00000490278 CPED1A4D0V7 1026 aa3.95□□□□□ -1.78
CD46-216ENST00000490278 CLEC18AA5D8T8 446 aa3.95□□□□□ -1.78
CD46-216ENST00000490278 AGAP14A8MT82 685 aa3.95□□□□□ -1.78
CD46-216ENST00000490278 K7ENM7 598 aa3.95□□□□□ -1.78
CD46-216ENST00000490278 DAB1O75553 588 aa3.95□□□□□ -1.78
CD46-216ENST00000490278 TSPAN9O75954 239 aa3.95□□□□□ -1.78
CD46-216ENST00000490278 GAGE7O76087 117 aa3.95□□□□□ -1.78
CD46-216ENST00000490278 NTN1O95631 604 aa3.95□□□□□ -1.78
CD46-216ENST00000490278 ALPLP05186 524 aa3.95□□□□□ -1.78
CD46-216ENST00000490278 GAGE12FP0CL80 117 aa3.95□□□□□ -1.78
CD46-216ENST00000490278 GAGE12GP0CL81 117 aa3.95□□□□□ -1.78
CD46-216ENST00000490278 GAGE12IP0CL82 117 aa3.95□□□□□ -1.78
CD46-216ENST00000490278 GABRB1P18505 474 aa3.95□□□□□ -1.78
CD46-216ENST00000490278 BDNFP23560 247 aa3.95□□□□□ -1.78
CD46-216ENST00000490278 LMO1P25800 156 aa3.95□□□□□ -1.78
CD46-216ENST00000490278 CDKN2AP42771 156 aaKnown RBP3.95□□□□□ -1.78
CD46-216ENST00000490278 PRCPP42785 496 aa3.95□□□□□ -1.78
CD46-216ENST00000490278 BNC1Q01954 994 aa3.95□□□□□ -1.78
CD46-216ENST00000490278 EGR4Q05215 589 aa3.95□□□□□ -1.78
CD46-216ENST00000490278 ACSM2AQ08AH3 577 aa3.95□□□□□ -1.78
CD46-216ENST00000490278 GRIK2Q13002 908 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms