RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 CKAP4Q07065 602 aaKnown RBP17.42■□□□□ 0.38
ERCC3-207ENST00000490062 PTK6Q13882 451 aa17.42■□□□□ 0.38
ERCC3-207ENST00000490062 DHX34Q14147 1143 aaKnown RBP17.42■□□□□ 0.38
ERCC3-207ENST00000490062 ACOX1Q15067 660 aa17.42■□□□□ 0.38
ERCC3-207ENST00000490062 IRF4Q15306 451 aa17.42■□□□□ 0.38
ERCC3-207ENST00000490062 WHAMMP3Q1A5X7 153 aa17.42■□□□□ 0.38
ERCC3-207ENST00000490062 ZDHHC20Q5W0Z9 365 aa17.42■□□□□ 0.38
ERCC3-207ENST00000490062 IL27RAQ6UWB1 636 aa17.42■□□□□ 0.38
ERCC3-207ENST00000490062 PRR23CQ6ZRP0 262 aa17.42■□□□□ 0.38
ERCC3-207ENST00000490062 DCLK2Q8N568 766 aa17.42■□□□□ 0.38
ERCC3-207ENST00000490062 SLC25A41Q8N5S1 370 aa17.42■□□□□ 0.38
ERCC3-207ENST00000490062 KIF18AQ8NI77 898 aa17.42■□□□□ 0.38
ERCC3-207ENST00000490062 FZD3Q9NPG1 666 aa17.42■□□□□ 0.38
ERCC3-207ENST00000490062 CASS4Q9NQ75 786 aa17.42■□□□□ 0.38
ERCC3-207ENST00000490062 MBNL1Q9NR56 388 aaKnown RBP17.42■□□□□ 0.38
ERCC3-207ENST00000490062 AASDHPPTQ9NRN7 309 aa17.42■□□□□ 0.38
ERCC3-207ENST00000490062 PKD2L2Q9NZM6 624 aa17.42■□□□□ 0.38
ERCC3-207ENST00000490062 IL17CQ9P0M4 197 aa17.42■□□□□ 0.38
ERCC3-207ENST00000490062 ZNF292O60281 2723 aa17.41■□□□□ 0.38
ERCC3-207ENST00000490062 LNP1A1A4G5 178 aa17.41■□□□□ 0.38
ERCC3-207ENST00000490062 DFNA5O60443 496 aa17.41■□□□□ 0.38
ERCC3-207ENST00000490062 APRTP07741 180 aa17.41■□□□□ 0.38
ERCC3-207ENST00000490062 CSNK1EP49674 416 aaKnown RBP17.41■□□□□ 0.38
ERCC3-207ENST00000490062 PDE1BQ01064 536 aa17.41■□□□□ 0.38
ERCC3-207ENST00000490062 CDH17Q12864 832 aa17.41■□□□□ 0.38
ERCC3-207ENST00000490062 GRIK2Q13002 908 aa17.41■□□□□ 0.38
ERCC3-207ENST00000490062 OLIG2Q13516 323 aa17.41■□□□□ 0.38
ERCC3-207ENST00000490062 KCNJ11Q14654 390 aa17.41■□□□□ 0.38
ERCC3-207ENST00000490062 TAF1AQ15573 450 aaPredicted RBP17.41■□□□□ 0.38
ERCC3-207ENST00000490062 HENMT1Q5T8I9 393 aaKnown RBP17.41■□□□□ 0.38
ERCC3-207ENST00000490062 KLHDC7BQ96G42 594 aa17.41■□□□□ 0.38
ERCC3-207ENST00000490062 PLEKHG4BQ96PX9 1271 aa17.41■□□□□ 0.38
ERCC3-207ENST00000490062 GPR63Q9BZJ6 419 aa17.41■□□□□ 0.38
ERCC3-207ENST00000490062 ABCG8Q9H221 673 aa17.41■□□□□ 0.38
ERCC3-207ENST00000490062 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.41■□□□□ 0.38
ERCC3-207ENST00000490062 RIMKLBQ9ULI2 386 aa17.41■□□□□ 0.38
ERCC3-207ENST00000490062 ANKRD6Q9Y2G4 727 aa17.41■□□□□ 0.38
ERCC3-207ENST00000490062 PTPRZ1P23471 2315 aaPredicted RBP17.41■□□□□ 0.38
ERCC3-207ENST00000490062 A0A0U1RQS6 177 aa17.4■□□□□ 0.38
ERCC3-207ENST00000490062 A0A1B0GVT2 93 aa17.4■□□□□ 0.38
ERCC3-207ENST00000490062 E7EVH7 732 aa17.4■□□□□ 0.38
ERCC3-207ENST00000490062 H0Y8X5 98 aa17.4■□□□□ 0.38
ERCC3-207ENST00000490062 AURKAO14965 403 aa17.4■□□□□ 0.38
ERCC3-207ENST00000490062 USP12O75317 370 aa17.4■□□□□ 0.38
ERCC3-207ENST00000490062 SOD1P00441 154 aa17.4■□□□□ 0.38
ERCC3-207ENST00000490062 CFIP05156 583 aa17.4■□□□□ 0.38
ERCC3-207ENST00000490062 PIRTP0C851 137 aa17.4■□□□□ 0.38
ERCC3-207ENST00000490062 THEGLP0DJG4 465 aa17.4■□□□□ 0.38
ERCC3-207ENST00000490062 IVDP26440 423 aa17.4■□□□□ 0.38
ERCC3-207ENST00000490062 LIMK1P53667 647 aa17.4■□□□□ 0.38
ERCC3-207ENST00000490062 CLDN2P57739 230 aa17.4■□□□□ 0.38
ERCC3-207ENST00000490062 BASP1P80723 227 aaKnown RBP17.4■□□□□ 0.38
ERCC3-207ENST00000490062 GPS1Q13098 491 aa17.4■□□□□ 0.38
ERCC3-207ENST00000490062 SPARCL1Q14515 664 aa17.4■□□□□ 0.38
ERCC3-207ENST00000490062 ZNF423Q2M1K9 1284 aa17.4■□□□□ 0.38
ERCC3-207ENST00000490062 PDPK2PQ6A1A2 396 aa17.4■□□□□ 0.38
ERCC3-207ENST00000490062 PNCKQ6P2M8 343 aa17.4■□□□□ 0.38
ERCC3-207ENST00000490062 GLT6D1Q7Z4J2 308 aa17.4■□□□□ 0.38
ERCC3-207ENST00000490062 OXR1Q8N573 874 aa17.4■□□□□ 0.38
ERCC3-207ENST00000490062 MCUQ8NE86 351 aa17.4■□□□□ 0.38
ERCC3-207ENST00000490062 OR13H1Q8NG92 308 aa17.4■□□□□ 0.38
ERCC3-207ENST00000490062 PEX13Q92968 403 aa17.4■□□□□ 0.38
ERCC3-207ENST00000490062 RANBP9Q96S59 729 aa17.4■□□□□ 0.38
ERCC3-207ENST00000490062 APOL2Q9BQE5 337 aa17.4■□□□□ 0.38
ERCC3-207ENST00000490062 TEX101Q9BY14 249 aa17.4■□□□□ 0.38
ERCC3-207ENST00000490062 SHOC2Q9UQ13 582 aa17.4■□□□□ 0.38
ERCC3-207ENST00000490062 CA5BQ9Y2D0 317 aa17.4■□□□□ 0.38
ERCC3-207ENST00000490062 MRFAP1Q9Y605 127 aa17.4■□□□□ 0.38
ERCC3-207ENST00000490062 FRYLO94915 3013 aa17.4■□□□□ 0.38
ERCC3-207ENST00000490062 SPTY2D1-AS1A0A0U1RR47 76 aa17.39■□□□□ 0.37
ERCC3-207ENST00000490062 URI1O94763 535 aaPredicted RBP17.39■□□□□ 0.37
ERCC3-207ENST00000490062 CRTAMO95727 393 aa17.39■□□□□ 0.37
ERCC3-207ENST00000490062 ZNF883P0CG24 379 aa17.39■□□□□ 0.37
ERCC3-207ENST00000490062 ENGP17813 658 aa17.39■□□□□ 0.37
ERCC3-207ENST00000490062 RXRGP48443 463 aa17.39■□□□□ 0.37
ERCC3-207ENST00000490062 C21orf59P57076 290 aa17.39■□□□□ 0.37
ERCC3-207ENST00000490062 KIAA1024LP59773 190 aa17.39■□□□□ 0.37
ERCC3-207ENST00000490062 DR1Q01658 176 aa17.39■□□□□ 0.37
ERCC3-207ENST00000490062 INPP5AQ14642 412 aa17.39■□□□□ 0.37
ERCC3-207ENST00000490062 SF3A2Q15428 464 aaKnown RBP17.39■□□□□ 0.37
ERCC3-207ENST00000490062 CCDC6Q16204 474 aa17.39■□□□□ 0.37
ERCC3-207ENST00000490062 KIF19Q2TAC6 998 aa17.39■□□□□ 0.37
ERCC3-207ENST00000490062 TCEAL6Q6IPX3 200 aa17.39■□□□□ 0.37
ERCC3-207ENST00000490062 ADAMTSL4Q6UY14 1074 aa17.39■□□□□ 0.37
ERCC3-207ENST00000490062 Q6ZSR6 202 aa17.39■□□□□ 0.37
ERCC3-207ENST00000490062 RFLNAQ6ZTI6 216 aa17.39■□□□□ 0.37
ERCC3-207ENST00000490062 ZNF534Q76KX8 674 aa17.39■□□□□ 0.37
ERCC3-207ENST00000490062 SPATS2Q86XZ4 545 aaKnown RBP17.39■□□□□ 0.37
ERCC3-207ENST00000490062 JAMLQ86YT9 394 aa17.39■□□□□ 0.37
ERCC3-207ENST00000490062 SLC22A18ASQ8N1D0 253 aa17.39■□□□□ 0.37
ERCC3-207ENST00000490062 BLOC1S5Q8TDH9 187 aa17.39■□□□□ 0.37
ERCC3-207ENST00000490062 CPT1BQ92523 772 aa17.39■□□□□ 0.37
ERCC3-207ENST00000490062 TCEAL3Q969E4 200 aa17.39■□□□□ 0.37
ERCC3-207ENST00000490062 AP2M1Q96CW1 435 aa17.39■□□□□ 0.37
ERCC3-207ENST00000490062 APOOQ9BUR5 198 aa17.39■□□□□ 0.37
ERCC3-207ENST00000490062 SMOC1Q9H4F8 434 aa17.39■□□□□ 0.37
ERCC3-207ENST00000490062 FAM83DQ9H4H8 585 aa17.39■□□□□ 0.37
ERCC3-207ENST00000490062 GDF3Q9NR23 364 aa17.39■□□□□ 0.37
ERCC3-207ENST00000490062 DNAAF2Q9NVR5 837 aaKnown RBP17.39■□□□□ 0.37
ERCC3-207ENST00000490062 ZNF106Q9H2Y7 1883 aaKnown RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms