RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 ARMCX1Q9P291 453 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 HEBP2Q9Y5Z4 205 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 FAM237BA0A1B0GVD1 139 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 GTPBP1O00178 669 aaKnown RBP8.85□□□□□ -0.99
LSAMP-205ENST00000490035 CHP2O43745 196 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 AMD1P17707 334 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 TPH1P17752 444 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 UBA1P22314 1058 aaKnown RBP8.85□□□□□ -0.99
LSAMP-205ENST00000490035 MMP8P22894 467 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 CLK2P49760 499 aaKnown RBP8.85□□□□□ -0.99
LSAMP-205ENST00000490035 C9orf131Q5VYM1 1079 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 DNAJC19Q96DA6 116 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 SNX15Q9NRS6 342 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 CHST7Q9NS84 486 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 MSRAQ9UJ68 235 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 HDCP19113 662 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 CDK18Q07002 472 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 MIIPQ5JXC2 388 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 CPTPQ5TA50 214 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 GCNT7Q6ZNI0 430 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 PPCDCQ96CD2 204 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 ZDHHC6Q9H6R6 413 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 SEMA4BQ9NPR2 832 aaPredicted RBP8.85□□□□□ -0.99
LSAMP-205ENST00000490035 FBXO5Q9UKT4 447 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 SLC12A4Q9UP95 1085 aa8.85□□□□□ -0.99
LSAMP-205ENST00000490035 HBS1LQ9Y450 684 aaKnown RBP8.85□□□□□ -0.99
LSAMP-205ENST00000490035 H0YJX3 145 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 CAPN1P07384 714 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 SRPRAP08240 638 aaKnown RBP8.84□□□□□ -0.99
LSAMP-205ENST00000490035 UROSP10746 265 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 TUBA4AP68366 448 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 PRR5P85299 388 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 FMO1Q01740 532 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 PPP3CAQ08209 521 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 TEX44Q53QW1 395 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 APOBEC3HQ6NTF7 200 aaKnown RBP8.84□□□□□ -0.99
LSAMP-205ENST00000490035 DRICH1Q6PGQ1 229 aaPredicted RBP8.84□□□□□ -0.99
LSAMP-205ENST00000490035 RTL4Q6ZR62 310 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 GRIP2Q9C0E4 1043 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 HHATLQ9HCP6 504 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 UBE2Q2LH0YL09 131 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 DRD4P21917 467 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 IGFALSP35858 605 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 CDH8P55286 799 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 SPIBQ01892 262 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 RFTN1Q14699 578 aaPredicted RBP8.84□□□□□ -0.99
LSAMP-205ENST00000490035 NUMA1Q14980 2115 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 NRF1Q16656 503 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 LCLAT1Q6UWP7 414 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 ARHGAP36Q6ZRI8 547 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 LRRC55Q6ZSA7 311 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 AVL9Q8NBF6 648 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 NKD2Q969F2 451 aaPredicted RBP8.84□□□□□ -0.99
LSAMP-205ENST00000490035 NARS2Q96I59 477 aaKnown RBP8.84□□□□□ -0.99
LSAMP-205ENST00000490035 DGCR6LQ9BY27 220 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 GBA3Q9H227 469 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 DDX18Q9NVP1 670 aaKnown RBP8.84□□□□□ -0.99
LSAMP-205ENST00000490035 LOC110117498-PIK3R3F6TDL0 507 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 RPP40O75818 363 aaKnown RBP8.84□□□□□ -0.99
LSAMP-205ENST00000490035 SMNDC1O75940 238 aaKnown RBP eCLIP8.84□□□□□ -0.99
LSAMP-205ENST00000490035 NDST2P52849 883 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 CDH4P55283 916 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 CXCL9Q07325 125 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 MYBPC3Q14896 1274 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 PTCHD4Q6ZW05 846 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 C11orf74Q86VG3 221 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 LINC00471Q8N535 108 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 PSMA8Q8TAA3 256 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 GRPEL2Q8TAA5 225 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 PIK3R3Q92569 461 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 AGO1Q9UL18 857 aaKnown RBP8.84□□□□□ -0.99
LSAMP-205ENST00000490035 PLK1P53350 603 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 MPPE1Q53F39 396 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 TATDN1Q6P1N9 297 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 AHI1Q8N157 1196 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 PRELID2Q8N945 189 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 BPIFB6Q8NFQ5 453 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 CHID1Q9BWS9 393 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 PCDHGB7Q9Y5F8 929 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 CBX6O95503 412 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 CCNCP24863 283 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 MANFP55145 182 aaKnown RBP8.84□□□□□ -0.99
LSAMP-205ENST00000490035 BST1Q10588 318 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 PYDC2Q56P42 97 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 RAET1GQ6H3X3 334 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 C17orf64Q86WR6 236 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 POU5F2Q8N7G0 328 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 SLC4A11Q8NBS3 891 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 TTLQ8NG68 377 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 OR2T34Q8NGX1 318 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 OR2T3Q8NH03 318 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 SEMA3CQ99985 751 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 GMEB1Q9Y692 573 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 TCRBV9S1A1TA0A576 114 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 METTL21EPA6NDL7 271 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 GATBO75879 557 aaKnown RBP8.84□□□□□ -0.99
LSAMP-205ENST00000490035 KLHL18O94889 574 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 FAM163BP0C2L3 166 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 GNPDA1P46926 289 aa8.84□□□□□ -0.99
LSAMP-205ENST00000490035 TYSND1Q2T9J0 566 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms