RNA–Protein interactions for RNA: ENST00000489941.6

LMO7-212, Transcript of LIM domain 7, humanhuman

TSL 2

Gene LMO7, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-212ENST00000489941 PSMD8P48556 350 aa5.68□□□□□ -1.5
LMO7-212ENST00000489941 SCNN1BP51168 640 aa5.68□□□□□ -1.5
LMO7-212ENST00000489941 CCNHP51946 323 aaPredicted RBP5.68□□□□□ -1.5
LMO7-212ENST00000489941 EPHB1P54762 984 aa5.68□□□□□ -1.5
LMO7-212ENST00000489941 GEMP55040 296 aa5.68□□□□□ -1.5
LMO7-212ENST00000489941 PLTPP55058 493 aa5.68□□□□□ -1.5
LMO7-212ENST00000489941 AP1S1P61966 158 aa5.68□□□□□ -1.5
LMO7-212ENST00000489941 SNRPD1P62314 119 aaKnown RBP5.68□□□□□ -1.5
LMO7-212ENST00000489941 VSNL1P62760 191 aa5.68□□□□□ -1.5
LMO7-212ENST00000489941 TUBB4BP68371 445 aa5.68□□□□□ -1.5
LMO7-212ENST00000489941 ECT2LQ008S8 904 aa5.68□□□□□ -1.5
LMO7-212ENST00000489941 GRSF1Q12849 480 aaKnown RBP eCLIP5.68□□□□□ -1.5
LMO7-212ENST00000489941 SEMA5AQ13591 1074 aa5.68□□□□□ -1.5
LMO7-212ENST00000489941 HNRNPDQ14103 355 aaKnown RBP5.68□□□□□ -1.5
LMO7-212ENST00000489941 LRRC32Q14392 662 aa5.68□□□□□ -1.5
LMO7-212ENST00000489941 SPARCL1Q14515 664 aa5.68□□□□□ -1.5
LMO7-212ENST00000489941 MORF4L2Q15014 288 aa5.68□□□□□ -1.5
LMO7-212ENST00000489941 TPSAB1Q15661 275 aa5.68□□□□□ -1.5
LMO7-212ENST00000489941 MLF2Q15773 248 aaPredicted RBP5.68□□□□□ -1.5
LMO7-212ENST00000489941 SMAD1Q15797 465 aaKnown RBP5.68□□□□□ -1.5
LMO7-212ENST00000489941 POM121L1PQ3SYA9 428 aa5.68□□□□□ -1.5
LMO7-212ENST00000489941 DNAJC21Q5F1R6 531 aaKnown RBP5.68□□□□□ -1.5
LMO7-212ENST00000489941 ANKRD22Q5VYY1 191 aa5.68□□□□□ -1.5
LMO7-212ENST00000489941 EGFLAMQ63HQ2 1017 aa5.68□□□□□ -1.5
LMO7-212ENST00000489941 CASC4Q6P4E1 433 aa5.68□□□□□ -1.5
LMO7-212ENST00000489941 C4orf22Q6V702 233 aa5.68□□□□□ -1.5
LMO7-212ENST00000489941 FAM214BQ7L5A3 538 aa5.68□□□□□ -1.5
LMO7-212ENST00000489941 TRMT11Q7Z4G4 463 aaKnown RBP5.68□□□□□ -1.5
LMO7-212ENST00000489941 PCGF5Q86SE9 256 aa5.68□□□□□ -1.5
LMO7-212ENST00000489941 SUGP1Q8IWZ8 645 aaKnown RBP5.68□□□□□ -1.5
LMO7-212ENST00000489941 PPIL6Q8IXY8 311 aa5.68□□□□□ -1.5
LMO7-212ENST00000489941 SH2D3CQ8N5H7 860 aa5.68□□□□□ -1.5
LMO7-212ENST00000489941 SLC25A41Q8N5S1 370 aa5.68□□□□□ -1.5
LMO7-212ENST00000489941 OTUD6BQ8N6M0 293 aa5.68□□□□□ -1.5
LMO7-212ENST00000489941 PCDH20Q8N6Y1 951 aaKnown RBP5.68□□□□□ -1.5
LMO7-212ENST00000489941 ZNF513Q8N8E2 541 aaPredicted RBP5.68□□□□□ -1.5
LMO7-212ENST00000489941 DNAAF3Q8N9W5 541 aa5.68□□□□□ -1.5
LMO7-212ENST00000489941 PPHLN1Q8NEY8 458 aaKnown RBP5.68□□□□□ -1.5
LMO7-212ENST00000489941 MAML1Q92585 1016 aa5.68□□□□□ -1.5
LMO7-212ENST00000489941 PRCCQ92733 491 aaPredicted RBP5.68□□□□□ -1.5
LMO7-212ENST00000489941 CFAP36Q96G28 342 aa5.68□□□□□ -1.5
LMO7-212ENST00000489941 ZNF419Q96HQ0 510 aaPredicted RBP5.68□□□□□ -1.5
LMO7-212ENST00000489941 HRASLS5Q96KN8 279 aa5.68□□□□□ -1.5
LMO7-212ENST00000489941 TEKT5Q96M29 485 aa5.68□□□□□ -1.5
LMO7-212ENST00000489941 RBM15Q96T37 977 aaKnown RBP eCLIP5.68□□□□□ -1.5
LMO7-212ENST00000489941 TBL1YQ9BQ87 522 aa5.68□□□□□ -1.5
LMO7-212ENST00000489941 APOL2Q9BQE5 337 aa5.68□□□□□ -1.5
LMO7-212ENST00000489941 MGME1Q9BQP7 344 aa5.68□□□□□ -1.5
LMO7-212ENST00000489941 ERP44Q9BS26 406 aa5.68□□□□□ -1.5
LMO7-212ENST00000489941 ACE2Q9BYF1 805 aaPredicted RBP5.68□□□□□ -1.5
LMO7-212ENST00000489941 C8orf33Q9H7E9 229 aaPredicted RBP5.68□□□□□ -1.5
LMO7-212ENST00000489941 ATP13A3Q9H7F0 1226 aa5.68□□□□□ -1.5
LMO7-212ENST00000489941 ANKZF1Q9H8Y5 726 aa5.68□□□□□ -1.5
LMO7-212ENST00000489941 GLOD4Q9HC38 313 aa5.68□□□□□ -1.5
LMO7-212ENST00000489941 EIF2B3Q9NR50 452 aaKnown RBP5.68□□□□□ -1.5
LMO7-212ENST00000489941 PIH1D1Q9NWS0 290 aaKnown RBP5.68□□□□□ -1.5
LMO7-212ENST00000489941 LHX3Q9UBR4 397 aa5.68□□□□□ -1.5
LMO7-212ENST00000489941 SUCOQ9UBS9 1254 aaKnown RBP5.68□□□□□ -1.5
LMO7-212ENST00000489941 PRKAG3Q9UGI9 489 aa5.68□□□□□ -1.5
LMO7-212ENST00000489941 ANAPC5Q9UJX4 755 aa5.68□□□□□ -1.5
LMO7-212ENST00000489941 NFU1Q9UMS0 254 aa5.68□□□□□ -1.5
LMO7-212ENST00000489941 PCDHB10Q9UN67 800 aa5.68□□□□□ -1.5
LMO7-212ENST00000489941 SORCS3Q9UPU3 1222 aa5.68□□□□□ -1.5
LMO7-212ENST00000489941 ERVW-1Q9UQF0 538 aa5.68□□□□□ -1.5
LMO7-212ENST00000489941 NOTCH4Q99466 2003 aa5.68□□□□□ -1.5
LMO7-212ENST00000489941 PRRC2BQ5JSZ5 2229 aaKnown RBP5.68□□□□□ -1.5
LMO7-212ENST00000489941 EDDM13A0A1B0GTR0 161 aa5.67□□□□□ -1.5
LMO7-212ENST00000489941 TTC34A8MYJ7 566 aa5.67□□□□□ -1.5
LMO7-212ENST00000489941 LOC730098B7Z3J9 87 aa5.67□□□□□ -1.5
LMO7-212ENST00000489941 C1QTNF3-AMACRE9PGA6 284 aa5.67□□□□□ -1.5
LMO7-212ENST00000489941 KPNA3O00505 521 aaPredicted RBP5.67□□□□□ -1.5
LMO7-212ENST00000489941 MUSKO15146 869 aa5.67□□□□□ -1.5
LMO7-212ENST00000489941 INSIG1O15503 277 aa5.67□□□□□ -1.5
LMO7-212ENST00000489941 SMAD6O43541 496 aaKnown RBP5.67□□□□□ -1.5
LMO7-212ENST00000489941 SYNCRIPO60506 623 aaKnown RBP5.67□□□□□ -1.5
LMO7-212ENST00000489941 GCATO75600 419 aa5.67□□□□□ -1.5
LMO7-212ENST00000489941 METTL18O95568 372 aa5.67□□□□□ -1.5
LMO7-212ENST00000489941 AP2A1O95782 977 aa5.67□□□□□ -1.5
LMO7-212ENST00000489941 MT-CYBP00156 380 aaPredicted RBP5.67□□□□□ -1.5
LMO7-212ENST00000489941 EGFP01133 1207 aa5.67□□□□□ -1.5
LMO7-212ENST00000489941 UGT2B4P06133 528 aa5.67□□□□□ -1.5
LMO7-212ENST00000489941 SRPRAP08240 638 aaKnown RBP5.67□□□□□ -1.5
LMO7-212ENST00000489941 DLDP09622 509 aaKnown RBP5.67□□□□□ -1.5
LMO7-212ENST00000489941 HOXB2P14652 356 aa5.67□□□□□ -1.5
LMO7-212ENST00000489941 XPAP23025 273 aaPredicted RBP5.67□□□□□ -1.5
LMO7-212ENST00000489941 PRKCHP24723 683 aa5.67□□□□□ -1.5
LMO7-212ENST00000489941 TNFRSF8P28908 595 aa5.67□□□□□ -1.5
LMO7-212ENST00000489941 STIP1P31948 543 aaKnown RBP5.67□□□□□ -1.5
LMO7-212ENST00000489941 RGRP47804 291 aa5.67□□□□□ -1.5
LMO7-212ENST00000489941 ARL4CP56559 192 aa5.67□□□□□ -1.5
LMO7-212ENST00000489941 SESN2P58004 480 aaPredicted RBP5.67□□□□□ -1.5
LMO7-212ENST00000489941 SARNPP82979 210 aaKnown RBP5.67□□□□□ -1.5
LMO7-212ENST00000489941 CAV1Q03135 178 aa5.67□□□□□ -1.5
LMO7-212ENST00000489941 RAD51Q06609 339 aa5.67□□□□□ -1.5
LMO7-212ENST00000489941 BCL2L1Q07817 233 aa5.67□□□□□ -1.5
LMO7-212ENST00000489941 MESP2Q0VG99 397 aa5.67□□□□□ -1.5
LMO7-212ENST00000489941 MPP3Q13368 585 aa5.67□□□□□ -1.5
LMO7-212ENST00000489941 OLIG2Q13516 323 aa5.67□□□□□ -1.5
LMO7-212ENST00000489941 ZNF234Q14588 700 aa5.67□□□□□ -1.5
LMO7-212ENST00000489941 KCNJ11Q14654 390 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms