RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 ECT2LQ008S8 904 aa6.54□□□□□ -1.36
PRPF40A-210ENST00000489741 SLC12A1Q13621 1099 aa6.54□□□□□ -1.36
PRPF40A-210ENST00000489741 ACAP1Q15027 740 aa6.54□□□□□ -1.36
PRPF40A-210ENST00000489741 COL28A1Q2UY09 1125 aa6.54□□□□□ -1.36
PRPF40A-210ENST00000489741 PRAMEF14Q5SWL7 426 aa6.54□□□□□ -1.36
PRPF40A-210ENST00000489741 DENND1BQ6P3S1 775 aa6.54□□□□□ -1.36
PRPF40A-210ENST00000489741 C19orf48Q6RUI8 117 aa6.54□□□□□ -1.36
PRPF40A-210ENST00000489741 RRAGAQ7L523 313 aa6.54□□□□□ -1.36
PRPF40A-210ENST00000489741 KANSL1Q7Z3B3 1105 aa6.54□□□□□ -1.36
PRPF40A-210ENST00000489741 GPR155Q7Z3F1 870 aa6.54□□□□□ -1.36
PRPF40A-210ENST00000489741 FGD2Q7Z6J4 655 aa6.54□□□□□ -1.36
PRPF40A-210ENST00000489741 TAC4Q86UU9 113 aa6.54□□□□□ -1.36
PRPF40A-210ENST00000489741 TMPRSS12Q86WS5 348 aa6.54□□□□□ -1.36
PRPF40A-210ENST00000489741 MMAAQ8IVH4 418 aaKnown RBP6.54□□□□□ -1.36
PRPF40A-210ENST00000489741 DHX40Q8IX18 779 aaKnown RBP6.54□□□□□ -1.36
PRPF40A-210ENST00000489741 APCDD1Q8J025 514 aa6.54□□□□□ -1.36
PRPF40A-210ENST00000489741 CFAP52Q8N1V2 620 aa6.54□□□□□ -1.36
PRPF40A-210ENST00000489741 PPM1KQ8N3J5 372 aa6.54□□□□□ -1.36
PRPF40A-210ENST00000489741 WDTC1Q8N5D0 677 aa6.54□□□□□ -1.36
PRPF40A-210ENST00000489741 AADATQ8N5Z0 425 aa6.54□□□□□ -1.36
PRPF40A-210ENST00000489741 ZNF606Q8WXB4 792 aa6.54□□□□□ -1.36
PRPF40A-210ENST00000489741 SNX19Q92543 992 aa6.54□□□□□ -1.36
PRPF40A-210ENST00000489741 UBXN4Q92575 508 aa6.54□□□□□ -1.36
PRPF40A-210ENST00000489741 SMARCE1Q969G3 411 aa6.54□□□□□ -1.36
PRPF40A-210ENST00000489741 BTN2A3PQ96KV6 586 aa6.54□□□□□ -1.36
PRPF40A-210ENST00000489741 RBM15Q96T37 977 aaKnown RBP eCLIP6.54□□□□□ -1.36
PRPF40A-210ENST00000489741 ELF4Q99607 663 aaPredicted RBP6.54□□□□□ -1.36
PRPF40A-210ENST00000489741 MIS12Q9H081 205 aa6.54□□□□□ -1.36
PRPF40A-210ENST00000489741 THAP9Q9H5L6 903 aa6.54□□□□□ -1.36
PRPF40A-210ENST00000489741 ERVMER34-1Q9H9K5 563 aa6.54□□□□□ -1.36
PRPF40A-210ENST00000489741 MAN1B1Q9UKM7 699 aa6.54□□□□□ -1.36
PRPF40A-210ENST00000489741 PCDHGA1Q9Y5H4 931 aa6.54□□□□□ -1.36
PRPF40A-210ENST00000489741 OR51B4Q9Y5P0 310 aa6.54□□□□□ -1.36
PRPF40A-210ENST00000489741 CEP192Q8TEP8 1941 aa6.54□□□□□ -1.36
PRPF40A-210ENST00000489741 MGAQ8IWI9 3026 aa6.53□□□□□ -1.36
PRPF40A-210ENST00000489741 EDDM13A0A1B0GTR0 161 aa6.53□□□□□ -1.36
PRPF40A-210ENST00000489741 ESYT3A0FGR9 886 aa6.53□□□□□ -1.36
PRPF40A-210ENST00000489741 LRRC72A6NJI9 287 aa6.53□□□□□ -1.36
PRPF40A-210ENST00000489741 TLR4O00206 839 aa6.53□□□□□ -1.36
PRPF40A-210ENST00000489741 PLD2O14939 933 aa6.53□□□□□ -1.36
PRPF40A-210ENST00000489741 RNASEH1O60930 286 aaKnown RBP6.53□□□□□ -1.36
PRPF40A-210ENST00000489741 TRUB2O95900 331 aaKnown RBP6.53□□□□□ -1.36
PRPF40A-210ENST00000489741 C1SP09871 688 aa6.53□□□□□ -1.36
PRPF40A-210ENST00000489741 C5AR1P21730 350 aa6.53□□□□□ -1.36
PRPF40A-210ENST00000489741 AOAHP28039 575 aa6.53□□□□□ -1.36
PRPF40A-210ENST00000489741 CD38P28907 300 aa6.53□□□□□ -1.36
PRPF40A-210ENST00000489741 PPP1R2P41236 205 aa6.53□□□□□ -1.36
PRPF40A-210ENST00000489741 ADPRHP54922 357 aa6.53□□□□□ -1.36
PRPF40A-210ENST00000489741 NXPH1P58417 271 aa6.53□□□□□ -1.36
PRPF40A-210ENST00000489741 PPP2CBP62714 309 aa6.53□□□□□ -1.36
PRPF40A-210ENST00000489741 YWHAZP63104 245 aaKnown RBP6.53□□□□□ -1.36
PRPF40A-210ENST00000489741 PPP2CAP67775 309 aa6.53□□□□□ -1.36
PRPF40A-210ENST00000489741 CETN1Q12798 172 aa6.53□□□□□ -1.36
PRPF40A-210ENST00000489741 MORC3Q14149 939 aa6.53□□□□□ -1.36
PRPF40A-210ENST00000489741 TAF5Q15542 800 aa6.53□□□□□ -1.36
PRPF40A-210ENST00000489741 C5orf22Q49AR2 442 aa6.53□□□□□ -1.36
PRPF40A-210ENST00000489741 SFMBT2Q5VUG0 894 aa6.53□□□□□ -1.36
PRPF40A-210ENST00000489741 RAP1GAP2Q684P5 730 aa6.53□□□□□ -1.36
PRPF40A-210ENST00000489741 CXorf57Q6NSI4 855 aaKnown RBP6.53□□□□□ -1.36
PRPF40A-210ENST00000489741 DHRS13Q6UX07 377 aa6.53□□□□□ -1.36
PRPF40A-210ENST00000489741 SPATS2Q86XZ4 545 aaKnown RBP6.53□□□□□ -1.36
PRPF40A-210ENST00000489741 REXO1L1PQ8IX06 675 aa6.53□□□□□ -1.36
PRPF40A-210ENST00000489741 LGI2Q8N0V4 545 aa6.53□□□□□ -1.36
PRPF40A-210ENST00000489741 STK40Q8N2I9 435 aa6.53□□□□□ -1.36
PRPF40A-210ENST00000489741 CARNMT1Q8N4J0 409 aa6.53□□□□□ -1.36
PRPF40A-210ENST00000489741 WDR48Q8TAF3 677 aa6.53□□□□□ -1.36
PRPF40A-210ENST00000489741 RPL10LQ96L21 214 aaKnown RBP6.53□□□□□ -1.36
PRPF40A-210ENST00000489741 BBC3Q96PG8 261 aaPredicted RBP6.53□□□□□ -1.36
PRPF40A-210ENST00000489741 SLC2A13Q96QE2 648 aa6.53□□□□□ -1.36
PRPF40A-210ENST00000489741 MED15Q96RN5 788 aa6.53□□□□□ -1.36
PRPF40A-210ENST00000489741 ACE2Q9BYF1 805 aaPredicted RBP6.53□□□□□ -1.36
PRPF40A-210ENST00000489741 POPDC2Q9HBU9 364 aa6.53□□□□□ -1.36
PRPF40A-210ENST00000489741 TRIM39Q9HCM9 518 aa6.53□□□□□ -1.36
PRPF40A-210ENST00000489741 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.53□□□□□ -1.36
PRPF40A-210ENST00000489741 SARDHQ9UL12 918 aa6.53□□□□□ -1.36
PRPF40A-210ENST00000489741 MUC22E2RYF6 1773 aaPredicted RBP6.53□□□□□ -1.36
PRPF40A-210ENST00000489741 MYH10P35580 1976 aa6.53□□□□□ -1.36
PRPF40A-210ENST00000489741 FAM149AA5PLN7 773 aa6.52□□□□□ -1.37
PRPF40A-210ENST00000489741 FAM47DPA6NHR8 397 aa6.52□□□□□ -1.37
PRPF40A-210ENST00000489741 BECN2A8MW95 431 aa6.52□□□□□ -1.37
PRPF40A-210ENST00000489741 E5RJQ4 531 aa6.52□□□□□ -1.37
PRPF40A-210ENST00000489741 CBX4O00257 560 aa6.52□□□□□ -1.37
PRPF40A-210ENST00000489741 MCF2LO15068 1137 aa6.52□□□□□ -1.37
PRPF40A-210ENST00000489741 YKT6O15498 198 aa6.52□□□□□ -1.37
PRPF40A-210ENST00000489741 SLC7A4O43246 635 aa6.52□□□□□ -1.37
PRPF40A-210ENST00000489741 RNASEH2AO75792 299 aaKnown RBP6.52□□□□□ -1.37
PRPF40A-210ENST00000489741 MOCS3O95396 460 aa6.52□□□□□ -1.37
PRPF40A-210ENST00000489741 LDOC1O95751 146 aaPredicted RBP6.52□□□□□ -1.37
PRPF40A-210ENST00000489741 GNA14O95837 355 aa6.52□□□□□ -1.37
PRPF40A-210ENST00000489741 MOCS2O96007 188 aaPredicted RBP6.52□□□□□ -1.37
PRPF40A-210ENST00000489741 AFPP02771 609 aaKnown RBP6.52□□□□□ -1.37
PRPF40A-210ENST00000489741 MMEP08473 750 aa6.52□□□□□ -1.37
PRPF40A-210ENST00000489741 CDK4P11802 303 aa6.52□□□□□ -1.37
PRPF40A-210ENST00000489741 MC4RP32245 332 aa6.52□□□□□ -1.37
PRPF40A-210ENST00000489741 CSF2RBP32927 897 aa6.52□□□□□ -1.37
PRPF40A-210ENST00000489741 NUDT1P36639 197 aa6.52□□□□□ -1.37
PRPF40A-210ENST00000489741 ACADVLP49748 655 aa6.52□□□□□ -1.37
PRPF40A-210ENST00000489741 STK19P49842 368 aaPredicted RBP6.52□□□□□ -1.37
PRPF40A-210ENST00000489741 METAP1P53582 386 aa6.52□□□□□ -1.37
PRPF40A-210ENST00000489741 C21orf59P57076 290 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms