RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 CARS2Q9HA77 564 aaKnown RBP9.18□□□□□ -0.94
SSBP1-212ENST00000489378 PCDH12Q9NPG4 1184 aa9.18□□□□□ -0.94
SSBP1-212ENST00000489378 SLAMF7Q9NQ25 335 aa9.18□□□□□ -0.94
SSBP1-212ENST00000489378 PCDHGA9Q9Y5G4 932 aaKnown RBP9.18□□□□□ -0.94
SSBP1-212ENST00000489378 DCHS2Q6V1P9 2916 aa9.18□□□□□ -0.94
SSBP1-212ENST00000489378 ANKUB1A6NFN9 424 aa9.17□□□□□ -0.94
SSBP1-212ENST00000489378 ESPNB1AK53 854 aa9.17□□□□□ -0.94
SSBP1-212ENST00000489378 INSIG1O15503 277 aa9.17□□□□□ -0.94
SSBP1-212ENST00000489378 SRGAP2O75044 1071 aa9.17□□□□□ -0.94
SSBP1-212ENST00000489378 GLI1P08151 1106 aa9.17□□□□□ -0.94
SSBP1-212ENST00000489378 XPAP23025 273 aaPredicted RBP9.17□□□□□ -0.94
SSBP1-212ENST00000489378 KELP23276 732 aa9.17□□□□□ -0.94
SSBP1-212ENST00000489378 STAT1P42224 750 aa9.17□□□□□ -0.94
SSBP1-212ENST00000489378 CXCR3P49682 368 aa9.17□□□□□ -0.94
SSBP1-212ENST00000489378 CCL11P51671 97 aa9.17□□□□□ -0.94
SSBP1-212ENST00000489378 ELP6Q0PNE2 266 aa9.17□□□□□ -0.94
SSBP1-212ENST00000489378 RESP18Q5W5W9 173 aa9.17□□□□□ -0.94
SSBP1-212ENST00000489378 SLC6A19Q695T7 634 aa9.17□□□□□ -0.94
SSBP1-212ENST00000489378 C6orf15Q6UXA7 325 aaPredicted RBP9.17□□□□□ -0.94
SSBP1-212ENST00000489378 RRAGAQ7L523 313 aa9.17□□□□□ -0.94
SSBP1-212ENST00000489378 RBMXL3Q8N7X1 1067 aaKnown RBP9.17□□□□□ -0.94
SSBP1-212ENST00000489378 SNRNP40Q96DI7 357 aaKnown RBP9.17□□□□□ -0.94
SSBP1-212ENST00000489378 LURAP1Q96LR2 239 aa9.17□□□□□ -0.94
SSBP1-212ENST00000489378 NT5C1BQ96P26 610 aa9.17□□□□□ -0.94
SSBP1-212ENST00000489378 GSDMCQ9BYG8 508 aa9.17□□□□□ -0.94
SSBP1-212ENST00000489378 ACP6Q9NPH0 428 aa9.17□□□□□ -0.94
SSBP1-212ENST00000489378 ASF1BQ9NVP2 202 aa9.17□□□□□ -0.94
SSBP1-212ENST00000489378 ASNSD1Q9NWL6 643 aa9.17□□□□□ -0.94
SSBP1-212ENST00000489378 FAM13BQ9NYF5 915 aa9.17□□□□□ -0.94
SSBP1-212ENST00000489378 LRCH4O75427 683 aa9.16□□□□□ -0.94
SSBP1-212ENST00000489378 RHOBTB3O94955 611 aa9.16□□□□□ -0.94
SSBP1-212ENST00000489378 PIGNO95427 931 aa9.16□□□□□ -0.94
SSBP1-212ENST00000489378 HOXC4P09017 264 aaPredicted RBP9.16□□□□□ -0.94
SSBP1-212ENST00000489378 NFKBIAP25963 317 aa9.16□□□□□ -0.94
SSBP1-212ENST00000489378 TRIM23P36406 574 aa9.16□□□□□ -0.94
SSBP1-212ENST00000489378 MMP12P39900 470 aa9.16□□□□□ -0.94
SSBP1-212ENST00000489378 NOP2P46087 812 aaKnown RBP9.16□□□□□ -0.94
SSBP1-212ENST00000489378 GNPDA1P46926 289 aa9.16□□□□□ -0.94
SSBP1-212ENST00000489378 PPM1FP49593 454 aaPredicted RBP9.16□□□□□ -0.94
SSBP1-212ENST00000489378 GPLD1P80108 840 aa9.16□□□□□ -0.94
SSBP1-212ENST00000489378 ILF3Q12906 894 aaKnown RBP eCLIP9.16□□□□□ -0.94
SSBP1-212ENST00000489378 DNASE1L3Q13609 305 aa9.16□□□□□ -0.94
SSBP1-212ENST00000489378 EFHC1Q5JVL4 640 aa9.16□□□□□ -0.94
SSBP1-212ENST00000489378 BRMS1LQ5PSV4 323 aa9.16□□□□□ -0.94
SSBP1-212ENST00000489378 FAM183BPQ6ZVS7 135 aa9.16□□□□□ -0.94
SSBP1-212ENST00000489378 LYSMD3Q7Z3D4 306 aa9.16□□□□□ -0.94
SSBP1-212ENST00000489378 SLC47A2Q86VL8 602 aa9.16□□□□□ -0.94
SSBP1-212ENST00000489378 ARHGEF19Q8IW93 802 aa9.16□□□□□ -0.94
SSBP1-212ENST00000489378 VWA5B2Q8N398 1253 aa9.16□□□□□ -0.94
SSBP1-212ENST00000489378 GUF1Q8N442 669 aaKnown RBP9.16□□□□□ -0.94
SSBP1-212ENST00000489378 AHCYL2Q96HN2 611 aaKnown RBP9.16□□□□□ -0.94
SSBP1-212ENST00000489378 C1orf74Q96LT6 269 aa9.16□□□□□ -0.94
SSBP1-212ENST00000489378 GDAP1L1Q96MZ0 367 aa9.16□□□□□ -0.94
SSBP1-212ENST00000489378 CPXM1Q96SM3 734 aa9.16□□□□□ -0.94
SSBP1-212ENST00000489378 RUFY1Q96T51 708 aa9.16□□□□□ -0.94
SSBP1-212ENST00000489378 TTYH3Q9C0H2 523 aa9.16□□□□□ -0.94
SSBP1-212ENST00000489378 ZNF395Q9H8N7 513 aaPredicted RBP9.16□□□□□ -0.94
SSBP1-212ENST00000489378 METTL14Q9HCE5 456 aaKnown RBP9.16□□□□□ -0.94
SSBP1-212ENST00000489378 NDFIP2Q9NV92 336 aa9.16□□□□□ -0.94
SSBP1-212ENST00000489378 SIDT1Q9NXL6 827 aaKnown RBP9.16□□□□□ -0.94
SSBP1-212ENST00000489378 KLHL3Q9UH77 587 aa9.16□□□□□ -0.94
SSBP1-212ENST00000489378 PHTF1Q9UMS5 762 aa9.16□□□□□ -0.94
SSBP1-212ENST00000489378 MDC1Q14676 2089 aaKnown RBP9.16□□□□□ -0.94
SSBP1-212ENST00000489378 TRBV23OR9-2A0A075B6M9 112 aa9.15□□□□□ -0.94
SSBP1-212ENST00000489378 ARGFXA6NJG6 315 aa9.15□□□□□ -0.94
SSBP1-212ENST00000489378 CETN3O15182 167 aa9.15□□□□□ -0.94
SSBP1-212ENST00000489378 TEX33O43247 280 aa9.15□□□□□ -0.94
SSBP1-212ENST00000489378 DAB1O75553 588 aa9.15□□□□□ -0.94
SSBP1-212ENST00000489378 RECQL5O94762 991 aaPredicted RBP9.15□□□□□ -0.94
SSBP1-212ENST00000489378 TMCC1O94876 653 aa9.15□□□□□ -0.94
SSBP1-212ENST00000489378 LETM1O95202 739 aaPredicted RBP9.15□□□□□ -0.94
SSBP1-212ENST00000489378 MAP3K6O95382 1288 aa9.15□□□□□ -0.94
SSBP1-212ENST00000489378 YEATS4O95619 227 aa9.15□□□□□ -0.94
SSBP1-212ENST00000489378 CEACAM5P06731 702 aa9.15□□□□□ -0.94
SSBP1-212ENST00000489378 GM2AP17900 193 aa9.15□□□□□ -0.94
SSBP1-212ENST00000489378 CASP14P31944 242 aa9.15□□□□□ -0.94
SSBP1-212ENST00000489378 CTBSQ01459 385 aa9.15□□□□□ -0.94
SSBP1-212ENST00000489378 RAPGEF1Q13905 1077 aa9.15□□□□□ -0.94
SSBP1-212ENST00000489378 TESK1Q15569 626 aa9.15□□□□□ -0.94
SSBP1-212ENST00000489378 UGP2Q16851 508 aa9.15□□□□□ -0.94
SSBP1-212ENST00000489378 WDR74Q6RFH5 385 aaPredicted RBP9.15□□□□□ -0.94
SSBP1-212ENST00000489378 OLFML1Q6UWY5 402 aa9.15□□□□□ -0.94
SSBP1-212ENST00000489378 ZSWIM9Q86XI8 627 aa9.15□□□□□ -0.94
SSBP1-212ENST00000489378 WDTC1Q8N5D0 677 aa9.15□□□□□ -0.94
SSBP1-212ENST00000489378 CISD2Q8N5K1 135 aaKnown RBP9.15□□□□□ -0.94
SSBP1-212ENST00000489378 OR10G6Q8NH81 332 aa9.15□□□□□ -0.94
SSBP1-212ENST00000489378 CT55Q8WUE5 264 aa9.15□□□□□ -0.94
SSBP1-212ENST00000489378 SLC35C1Q96A29 364 aa9.15□□□□□ -0.94
SSBP1-212ENST00000489378 PNPLA2Q96AD5 504 aa9.15□□□□□ -0.94
SSBP1-212ENST00000489378 STAMBPL1Q96FJ0 436 aa9.15□□□□□ -0.94
SSBP1-212ENST00000489378 KREMEN1Q96MU8 473 aa9.15□□□□□ -0.94
SSBP1-212ENST00000489378 NPY6RQ99463 290 aa9.15□□□□□ -0.94
SSBP1-212ENST00000489378 ZYG11BQ9C0D3 744 aa9.15□□□□□ -0.94
SSBP1-212ENST00000489378 ACTL8Q9H568 366 aa9.15□□□□□ -0.94
SSBP1-212ENST00000489378 WDR26Q9H7D7 661 aa9.15□□□□□ -0.94
SSBP1-212ENST00000489378 PCDHA7Q9UN72 937 aa9.15□□□□□ -0.94
SSBP1-212ENST00000489378 ZNF451Q9Y4E5 1061 aa9.15□□□□□ -0.94
SSBP1-212ENST00000489378 PLEKHM1Q9Y4G2 1056 aa9.15□□□□□ -0.94
SSBP1-212ENST00000489378 PCDHGA6Q9Y5G7 932 aa9.15□□□□□ -0.94
SSBP1-212ENST00000489378 PCSK5Q92824 1860 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms