RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 ARL8BQ9NVJ2 186 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 PIH1D1Q9NWS0 290 aaKnown RBP8.49□□□□□ -1.05
VTI1A-207ENST00000489357 NDE1Q9NXR1 346 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 TAS2R1Q9NYW7 299 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 UBP1Q9NZI7 540 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 SLC39A10Q9ULF5 831 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 DNAJC16Q9Y2G8 782 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 STK38LQ9Y2H1 464 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 HCFC2Q9Y5Z7 792 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 XIRP2A4UGR9 3374 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 DENND4AQ7Z401 1863 aa8.49□□□□□ -1.05
VTI1A-207ENST00000489357 CCDC195A0A1B0GUA6 201 aa8.48□□□□□ -1.05
VTI1A-207ENST00000489357 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.48□□□□□ -1.05
VTI1A-207ENST00000489357 TRPC5OSA6NMA1 111 aa8.48□□□□□ -1.05
VTI1A-207ENST00000489357 MATN2O00339 956 aa8.48□□□□□ -1.05
VTI1A-207ENST00000489357 ZNF195O14628 629 aa8.48□□□□□ -1.05
VTI1A-207ENST00000489357 HDAC3O15379 428 aa8.48□□□□□ -1.05
VTI1A-207ENST00000489357 KDELR3O43731 214 aa8.48□□□□□ -1.05
VTI1A-207ENST00000489357 VNN2O95498 520 aa8.48□□□□□ -1.05
VTI1A-207ENST00000489357 CRTAMO95727 393 aa8.48□□□□□ -1.05
VTI1A-207ENST00000489357 NDST3O95803 873 aa8.48□□□□□ -1.05
VTI1A-207ENST00000489357 URODP06132 367 aa8.48□□□□□ -1.05
VTI1A-207ENST00000489357 MMP2P08253 660 aa8.48□□□□□ -1.05
VTI1A-207ENST00000489357 ATF6P18850 670 aa8.48□□□□□ -1.05
VTI1A-207ENST00000489357 CD9P21926 228 aa8.48□□□□□ -1.05
VTI1A-207ENST00000489357 ATP5F1P24539 256 aaPredicted RBP8.48□□□□□ -1.05
VTI1A-207ENST00000489357 CD86P42081 329 aa8.48□□□□□ -1.05
VTI1A-207ENST00000489357 SLC1A2P43004 574 aa8.48□□□□□ -1.05
VTI1A-207ENST00000489357 GPR15P49685 360 aa8.48□□□□□ -1.05
VTI1A-207ENST00000489357 RPL14P50914 215 aaKnown RBP8.48□□□□□ -1.05
VTI1A-207ENST00000489357 EPHA4P54764 986 aa8.48□□□□□ -1.05
VTI1A-207ENST00000489357 PRAMEP78395 509 aa8.48□□□□□ -1.05
VTI1A-207ENST00000489357 GNA12Q03113 381 aa8.48□□□□□ -1.05
VTI1A-207ENST00000489357 PLD1Q13393 1074 aa8.48□□□□□ -1.05
VTI1A-207ENST00000489357 OLIG2Q13516 323 aa8.48□□□□□ -1.05
VTI1A-207ENST00000489357 ITGA9Q13797 1035 aa8.48□□□□□ -1.05
VTI1A-207ENST00000489357 ACAP2Q15057 778 aa8.48□□□□□ -1.05
VTI1A-207ENST00000489357 CNGA3Q16281 694 aa8.48□□□□□ -1.05
VTI1A-207ENST00000489357 HSF5Q4G112 596 aaPredicted RBP8.48□□□□□ -1.05
VTI1A-207ENST00000489357 PABPC1LQ4VXU2 614 aaKnown RBP8.48□□□□□ -1.05
VTI1A-207ENST00000489357 ALFQ53S48 1182 aa8.48□□□□□ -1.05
VTI1A-207ENST00000489357 ADGRF1Q5T601 910 aa8.48□□□□□ -1.05
VTI1A-207ENST00000489357 CES4AQ5XG92 561 aa8.48□□□□□ -1.05
VTI1A-207ENST00000489357 KIAA1841Q6NSI8 718 aa8.48□□□□□ -1.05
VTI1A-207ENST00000489357 LRRC8EQ6NSJ5 796 aa8.48□□□□□ -1.05
VTI1A-207ENST00000489357 FAM45BPQ6NSW5 357 aa8.48□□□□□ -1.05
VTI1A-207ENST00000489357 ESRP1Q6NXG1 681 aaKnown RBP8.48□□□□□ -1.05
VTI1A-207ENST00000489357 C16orf46Q6P387 395 aa8.48□□□□□ -1.05
VTI1A-207ENST00000489357 EPGNQ6UW88 154 aa8.48□□□□□ -1.05
VTI1A-207ENST00000489357 PRSS55Q6UWB4 352 aaPredicted RBP8.48□□□□□ -1.05
VTI1A-207ENST00000489357 RTL10Q7L3V2 364 aa8.48□□□□□ -1.05
VTI1A-207ENST00000489357 TFAP2DQ7Z6R9 452 aa8.48□□□□□ -1.05
VTI1A-207ENST00000489357 RBM23Q86U06 439 aaKnown RBP8.48□□□□□ -1.05
VTI1A-207ENST00000489357 MIB1Q86YT6 1006 aa8.48□□□□□ -1.05
VTI1A-207ENST00000489357 CILP2Q8IUL8 1156 aa8.48□□□□□ -1.05
VTI1A-207ENST00000489357 FSTL5Q8N475 847 aaPredicted RBP8.48□□□□□ -1.05
VTI1A-207ENST00000489357 TMEM151AQ8N4L1 468 aa8.48□□□□□ -1.05
VTI1A-207ENST00000489357 TTC9BQ8N6N2 239 aa8.48□□□□□ -1.05
VTI1A-207ENST00000489357 FAM45AQ8TCE6 357 aa8.48□□□□□ -1.05
VTI1A-207ENST00000489357 SUSD6Q92537 303 aa8.48□□□□□ -1.05
VTI1A-207ENST00000489357 IGSF8Q969P0 613 aa8.48□□□□□ -1.05
VTI1A-207ENST00000489357 PSMG2Q969U7 264 aa8.48□□□□□ -1.05
VTI1A-207ENST00000489357 IFT43Q96FT9 208 aa8.48□□□□□ -1.05
VTI1A-207ENST00000489357 UBXN10Q96LJ8 280 aa8.48□□□□□ -1.05
VTI1A-207ENST00000489357 ZNF778Q96MU6 729 aa8.48□□□□□ -1.05
VTI1A-207ENST00000489357 NUDCD1Q96RS6 583 aa8.48□□□□□ -1.05
VTI1A-207ENST00000489357 EMILIN2Q9BXX0 1053 aa8.48□□□□□ -1.05
VTI1A-207ENST00000489357 C20orf27Q9GZN8 174 aa8.48□□□□□ -1.05
VTI1A-207ENST00000489357 EML4Q9HC35 981 aaKnown RBP8.48□□□□□ -1.05
VTI1A-207ENST00000489357 INTS10Q9NVR2 710 aaKnown RBP8.48□□□□□ -1.05
VTI1A-207ENST00000489357 TRPM5Q9NZQ8 1165 aa8.48□□□□□ -1.05
VTI1A-207ENST00000489357 SCHIP1Q9P0W5 487 aaPredicted RBP8.48□□□□□ -1.05
VTI1A-207ENST00000489357 SLC17A6Q9P2U8 582 aa8.48□□□□□ -1.05
VTI1A-207ENST00000489357 TBC1D30Q9Y2I9 924 aa8.48□□□□□ -1.05
VTI1A-207ENST00000489357 A0A0C4DFX4 3053 aa8.48□□□□□ -1.05
VTI1A-207ENST00000489357 TYW5A2RUC4 315 aaKnown RBP8.47□□□□□ -1.05
VTI1A-207ENST00000489357 ZNF840PA6NDX5 716 aa8.47□□□□□ -1.05
VTI1A-207ENST00000489357 J3KR12 359 aa8.47□□□□□ -1.05
VTI1A-207ENST00000489357 TGM5O43548 720 aa8.47□□□□□ -1.05
VTI1A-207ENST00000489357 LDB2O43679 373 aa8.47□□□□□ -1.05
VTI1A-207ENST00000489357 ITM2AO43736 263 aa8.47□□□□□ -1.05
VTI1A-207ENST00000489357 TM7SF2O76062 418 aa8.47□□□□□ -1.05
VTI1A-207ENST00000489357 CNTN5O94779 1100 aa8.47□□□□□ -1.05
VTI1A-207ENST00000489357 POU2F2P09086 479 aa8.47□□□□□ -1.05
VTI1A-207ENST00000489357 LTA4HP09960 611 aaKnown RBP8.47□□□□□ -1.05
VTI1A-207ENST00000489357 ATXN1LP0C7T5 689 aaKnown RBP8.47□□□□□ -1.05
VTI1A-207ENST00000489357 EPCAMP16422 314 aa8.47□□□□□ -1.05
VTI1A-207ENST00000489357 RPL17P18621 184 aaKnown RBP8.47□□□□□ -1.05
VTI1A-207ENST00000489357 KCNA5P22460 613 aa8.47□□□□□ -1.05
VTI1A-207ENST00000489357 GABRB3P28472 473 aa8.47□□□□□ -1.05
VTI1A-207ENST00000489357 ALDH1A3P47895 512 aa8.47□□□□□ -1.05
VTI1A-207ENST00000489357 IDH3AP50213 366 aa8.47□□□□□ -1.05
VTI1A-207ENST00000489357 SUOXP51687 545 aa8.47□□□□□ -1.05
VTI1A-207ENST00000489357 COPAP53621 1224 aa8.47□□□□□ -1.05
VTI1A-207ENST00000489357 OXCT1P55809 520 aa8.47□□□□□ -1.05
VTI1A-207ENST00000489357 NFKB2Q00653 900 aa8.47□□□□□ -1.05
VTI1A-207ENST00000489357 ITKQ08881 620 aa8.47□□□□□ -1.05
VTI1A-207ENST00000489357 POU4F2Q12837 409 aa8.47□□□□□ -1.05
VTI1A-207ENST00000489357 SEPT6Q14141 434 aa8.47□□□□□ -1.05
VTI1A-207ENST00000489357 HERC3Q15034 1050 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms