RNA–Protein interactions for RNA: ENST00000488594.5

GGPS1-206, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-206ENST00000488594 CATSPER2Q96P56 530 aa19.03■□□□□ 0.64
GGPS1-206ENST00000488594 PARVAQ9NVD7 372 aa19.03■□□□□ 0.64
GGPS1-206ENST00000488594 SLC17A4Q9Y2C5 497 aa19.03■□□□□ 0.64
GGPS1-206ENST00000488594 PTPN13Q12923 2485 aa19.03■□□□□ 0.64
GGPS1-206ENST00000488594 B4E171 279 aa19.02■□□□□ 0.64
GGPS1-206ENST00000488594 FUCA1P04066 466 aa19.02■□□□□ 0.64
GGPS1-206ENST00000488594 IVLP07476 585 aa19.02■□□□□ 0.64
GGPS1-206ENST00000488594 THRAP10827 490 aa19.02■□□□□ 0.64
GGPS1-206ENST00000488594 AK4P27144 223 aaPredicted RBP19.02■□□□□ 0.64
GGPS1-206ENST00000488594 TSPAN7P41732 249 aa19.02■□□□□ 0.64
GGPS1-206ENST00000488594 CCR10P46092 362 aa19.02■□□□□ 0.64
GGPS1-206ENST00000488594 HCAR3P49019 387 aa19.02■□□□□ 0.64
GGPS1-206ENST00000488594 ARSDP51689 593 aa19.02■□□□□ 0.64
GGPS1-206ENST00000488594 POLE2P56282 527 aa19.02■□□□□ 0.64
GGPS1-206ENST00000488594 RAB15P59190 212 aa19.02■□□□□ 0.64
GGPS1-206ENST00000488594 GPLD1P80108 840 aa19.02■□□□□ 0.64
GGPS1-206ENST00000488594 CTBSQ01459 385 aa19.02■□□□□ 0.64
GGPS1-206ENST00000488594 KCNAB2Q13303 367 aa19.02■□□□□ 0.64
GGPS1-206ENST00000488594 MAMLD1Q13495 774 aa19.02■□□□□ 0.64
GGPS1-206ENST00000488594 CA9Q16790 459 aa19.02■□□□□ 0.64
GGPS1-206ENST00000488594 ARHGAP36Q6ZRI8 547 aa19.02■□□□□ 0.64
GGPS1-206ENST00000488594 NAGSQ8N159 534 aa19.02■□□□□ 0.64
GGPS1-206ENST00000488594 PIAS4Q8N2W9 510 aaPredicted RBP19.02■□□□□ 0.64
GGPS1-206ENST00000488594 CBARPQ8N350 705 aaPredicted RBP19.02■□□□□ 0.64
GGPS1-206ENST00000488594 ANKRD20A12PQ8NF67 263 aa19.02■□□□□ 0.64
GGPS1-206ENST00000488594 ART4Q93070 314 aa19.02■□□□□ 0.64
GGPS1-206ENST00000488594 SNRNP25Q9BV90 132 aaKnown RBP19.02■□□□□ 0.64
GGPS1-206ENST00000488594 PHTF1Q9UMS5 762 aa19.02■□□□□ 0.64
GGPS1-206ENST00000488594 B3GALT1Q9Y5Z6 326 aa19.02■□□□□ 0.64
GGPS1-206ENST00000488594 IGHV1OR21-1A0A087WYE8 117 aa19.01■□□□□ 0.63
GGPS1-206ENST00000488594 RNF8O76064 485 aa19.01■□□□□ 0.63
GGPS1-206ENST00000488594 CPP00450 1065 aa19.01■□□□□ 0.63
GGPS1-206ENST00000488594 CYP2A6P11509 494 aaPredicted RBP19.01■□□□□ 0.63
GGPS1-206ENST00000488594 LIFP15018 202 aa19.01■□□□□ 0.63
GGPS1-206ENST00000488594 ADCY8P40145 1251 aa19.01■□□□□ 0.63
GGPS1-206ENST00000488594 ETV3P41162 512 aa19.01■□□□□ 0.63
GGPS1-206ENST00000488594 SLC10A7Q0GE19 358 aa19.01■□□□□ 0.63
GGPS1-206ENST00000488594 ZNF235Q14590 738 aa19.01■□□□□ 0.63
GGPS1-206ENST00000488594 PPP6R3Q5H9R7 873 aaPredicted RBP19.01■□□□□ 0.63
GGPS1-206ENST00000488594 DCAF12Q5T6F0 453 aa19.01■□□□□ 0.63
GGPS1-206ENST00000488594 RAET1GQ6H3X3 334 aa19.01■□□□□ 0.63
GGPS1-206ENST00000488594 CACNA2D3Q8IZS8 1091 aa19.01■□□□□ 0.63
GGPS1-206ENST00000488594 PDCD6IPQ8WUM4 868 aaKnown RBP19.01■□□□□ 0.63
GGPS1-206ENST00000488594 PMEPA1Q969W9 287 aa19.01■□□□□ 0.63
GGPS1-206ENST00000488594 NSMCE3Q96MG7 304 aa19.01■□□□□ 0.63
GGPS1-206ENST00000488594 NUDCD1Q96RS6 583 aa19.01■□□□□ 0.63
GGPS1-206ENST00000488594 KCTD15Q96SI1 283 aaPredicted RBP19.01■□□□□ 0.63
GGPS1-206ENST00000488594 SLC39A1Q9NY26 324 aa19.01■□□□□ 0.63
GGPS1-206ENST00000488594 KCNK4Q9NYG8 393 aa19.01■□□□□ 0.63
GGPS1-206ENST00000488594 PCSK1NQ9UHG2 260 aa19.01■□□□□ 0.63
GGPS1-206ENST00000488594 PCDHGC4Q9Y5F7 938 aa19.01■□□□□ 0.63
GGPS1-206ENST00000488594 ZNF891A8MT65 544 aaPredicted RBP19■□□□□ 0.63
GGPS1-206ENST00000488594 LGALS16A8MUM7 142 aa19■□□□□ 0.63
GGPS1-206ENST00000488594 PPM1DO15297 605 aa19■□□□□ 0.63
GGPS1-206ENST00000488594 PRPSAP2O60256 369 aa19■□□□□ 0.63
GGPS1-206ENST00000488594 FERP16591 822 aa19■□□□□ 0.63
GGPS1-206ENST00000488594 COPB1P53618 953 aaKnown RBP19■□□□□ 0.63
GGPS1-206ENST00000488594 DPTQ07507 201 aa19■□□□□ 0.63
GGPS1-206ENST00000488594 RALGPS1Q5JS13 557 aa19■□□□□ 0.63
GGPS1-206ENST00000488594 NKAIN2Q5VXU1 208 aa19■□□□□ 0.63
GGPS1-206ENST00000488594 DENND2CQ68D51 928 aa19■□□□□ 0.63
GGPS1-206ENST00000488594 TMEM71Q6P5X7 295 aa19■□□□□ 0.63
GGPS1-206ENST00000488594 HSD11B1LQ7Z5J1 315 aa19■□□□□ 0.63
GGPS1-206ENST00000488594 BBS5Q8N3I7 341 aa19■□□□□ 0.63
GGPS1-206ENST00000488594 PATE1Q8WXA2 126 aa19■□□□□ 0.63
GGPS1-206ENST00000488594 SCARF2Q96GP6 870 aaPredicted RBP19■□□□□ 0.63
GGPS1-206ENST00000488594 TEFMQ96QE5 360 aaKnown RBP19■□□□□ 0.63
GGPS1-206ENST00000488594 PEBP4Q96S96 227 aa19■□□□□ 0.63
GGPS1-206ENST00000488594 ZWILCHQ9H900 591 aa19■□□□□ 0.63
GGPS1-206ENST00000488594 FANCLQ9NW38 375 aa19■□□□□ 0.63
GGPS1-206ENST00000488594 ARHGEF17Q96PE2 2063 aaPredicted RBP19■□□□□ 0.63
GGPS1-206ENST00000488594 GOLGA6CA6NDK9 693 aa18.99■□□□□ 0.63
GGPS1-206ENST00000488594 GOLGA6BA6NDN3 693 aa18.99■□□□□ 0.63
GGPS1-206ENST00000488594 RAD1O60671 282 aa18.99■□□□□ 0.63
GGPS1-206ENST00000488594 GOLGA6DP0CG33 693 aa18.99■□□□□ 0.63
GGPS1-206ENST00000488594 CR2P20023 1033 aa18.99■□□□□ 0.63
GGPS1-206ENST00000488594 LHCGRP22888 699 aa18.99■□□□□ 0.63
GGPS1-206ENST00000488594 CSF2RBP32927 897 aa18.99■□□□□ 0.63
GGPS1-206ENST00000488594 MAN1A1P33908 653 aa18.99■□□□□ 0.63
GGPS1-206ENST00000488594 ACTR1BP42025 376 aa18.99■□□□□ 0.63
GGPS1-206ENST00000488594 ACTR1AP61163 376 aa18.99■□□□□ 0.63
GGPS1-206ENST00000488594 PLEKHA7Q6IQ23 1121 aa18.99■□□□□ 0.63
GGPS1-206ENST00000488594 Q6ZVL8 140 aa18.99■□□□□ 0.63
GGPS1-206ENST00000488594 USP45Q70EL2 814 aa18.99■□□□□ 0.63
GGPS1-206ENST00000488594 FAM129CQ86XR2 697 aa18.99■□□□□ 0.63
GGPS1-206ENST00000488594 ARFGAP1Q8N6T3 406 aa18.99■□□□□ 0.63
GGPS1-206ENST00000488594 FNIP1Q8TF40 1166 aa18.99■□□□□ 0.63
GGPS1-206ENST00000488594 SCRN2Q96FV2 425 aa18.99■□□□□ 0.63
GGPS1-206ENST00000488594 OR2M4Q96R27 311 aa18.99■□□□□ 0.63
GGPS1-206ENST00000488594 ERGIC2Q96RQ1 377 aa18.99■□□□□ 0.63
GGPS1-206ENST00000488594 GOLGA6AQ9NYA3 693 aa18.99■□□□□ 0.63
GGPS1-206ENST00000488594 ANAPC2Q9UJX6 822 aa18.99■□□□□ 0.63
GGPS1-206ENST00000488594 ST14Q9Y5Y6 855 aa18.99■□□□□ 0.63
GGPS1-206ENST00000488594 SDK2Q58EX2 2172 aa18.99■□□□□ 0.63
GGPS1-206ENST00000488594 MIPP30301 263 aa18.98■□□□□ 0.63
GGPS1-206ENST00000488594 FASLGP48023 281 aa18.98■□□□□ 0.63
GGPS1-206ENST00000488594 POLD2P49005 469 aa18.98■□□□□ 0.63
GGPS1-206ENST00000488594 UBXN1Q04323 297 aa18.98■□□□□ 0.63
GGPS1-206ENST00000488594 LRP8Q14114 963 aa18.98■□□□□ 0.63
GGPS1-206ENST00000488594 DPYSQ14117 519 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms