RNA–Protein interactions for RNA: ENST00000488558.2

CUL4A-209, Transcript of cullin 4A, humanhuman

TSL 3 BASIC

Gene CUL4A, Length 1,111 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-209ENST00000488558 CCDC13Q8IYE1 715 aa23.07■■□□□ 1.28
CUL4A-209ENST00000488558 CCDC74AQ96AQ1 378 aa23.07■■□□□ 1.28
CUL4A-209ENST00000488558 HIC2Q96JB3 615 aa23.07■■□□□ 1.28
CUL4A-209ENST00000488558 FRMD8Q9BZ67 464 aaPredicted RBP23.07■■□□□ 1.28
CUL4A-209ENST00000488558 TMEM168Q9H0V1 697 aa23.07■■□□□ 1.28
CUL4A-209ENST00000488558 PCDHGA8Q9Y5G5 932 aa23.07■■□□□ 1.28
CUL4A-209ENST00000488558 IGSF10Q6WRI0 2623 aa23.06■■□□□ 1.28
CUL4A-209ENST00000488558 CEACAM5P06731 702 aa23.06■■□□□ 1.28
CUL4A-209ENST00000488558 PYGLP06737 847 aa23.06■■□□□ 1.28
CUL4A-209ENST00000488558 PNLIPP16233 465 aa23.06■■□□□ 1.28
CUL4A-209ENST00000488558 CTPS1P17812 591 aa23.06■■□□□ 1.28
CUL4A-209ENST00000488558 MLLT3P42568 568 aaPredicted RBP23.06■■□□□ 1.28
CUL4A-209ENST00000488558 SLC1A1P43005 524 aa23.06■■□□□ 1.28
CUL4A-209ENST00000488558 PDX1P52945 283 aa23.06■■□□□ 1.28
CUL4A-209ENST00000488558 EPHB1P54762 984 aa23.06■■□□□ 1.28
CUL4A-209ENST00000488558 TBX2Q13207 712 aaPredicted RBP23.06■■□□□ 1.28
CUL4A-209ENST00000488558 IHHQ14623 411 aa23.06■■□□□ 1.28
CUL4A-209ENST00000488558 CERCAMQ5T4B2 595 aa23.06■■□□□ 1.28
CUL4A-209ENST00000488558 SLC9A4Q6AI14 798 aa23.06■■□□□ 1.28
CUL4A-209ENST00000488558 RAET1GQ6H3X3 334 aa23.06■■□□□ 1.28
CUL4A-209ENST00000488558 SARM1Q6SZW1 724 aa23.06■■□□□ 1.28
CUL4A-209ENST00000488558 PLD5Q8N7P1 536 aa23.06■■□□□ 1.28
CUL4A-209ENST00000488558 ZNF248Q8NDW4 579 aa23.06■■□□□ 1.28
CUL4A-209ENST00000488558 ATXN7L3BQ96GX2 97 aa23.06■■□□□ 1.28
CUL4A-209ENST00000488558 LYSMD1Q96S90 227 aa23.06■■□□□ 1.28
CUL4A-209ENST00000488558 ANP32EQ9BTT0 268 aa23.06■■□□□ 1.28
CUL4A-209ENST00000488558 ASCL3Q9NQ33 180 aa23.06■■□□□ 1.28
CUL4A-209ENST00000488558 TRNAU1APQ9NX07 287 aaKnown RBP23.06■■□□□ 1.28
CUL4A-209ENST00000488558 APPL1Q9UKG1 709 aa23.06■■□□□ 1.28
CUL4A-209ENST00000488558 SLC17A4Q9Y2C5 497 aa23.06■■□□□ 1.28
CUL4A-209ENST00000488558 TTLL3Q9Y4R7 772 aa23.06■■□□□ 1.28
CUL4A-209ENST00000488558 C3orf70A6NLC5 250 aaPredicted RBP23.05■■□□□ 1.28
CUL4A-209ENST00000488558 AKR1B15C9JRZ8 316 aaPredicted RBP23.05■■□□□ 1.28
CUL4A-209ENST00000488558 NOBOXO60393 691 aa23.05■■□□□ 1.28
CUL4A-209ENST00000488558 GLB1P16278 677 aa23.05■■□□□ 1.28
CUL4A-209ENST00000488558 IFI35P80217 286 aaPredicted RBP23.05■■□□□ 1.28
CUL4A-209ENST00000488558 ADAMTSL4Q6UY14 1074 aa23.05■■□□□ 1.28
CUL4A-209ENST00000488558 CCNYQ8ND76 341 aa23.05■■□□□ 1.28
CUL4A-209ENST00000488558 FAM46DQ8NEK8 389 aa23.05■■□□□ 1.28
CUL4A-209ENST00000488558 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.05■■□□□ 1.28
CUL4A-209ENST00000488558 GPBAR1Q8TDU6 330 aa23.05■■□□□ 1.28
CUL4A-209ENST00000488558 CARS2Q9HA77 564 aaKnown RBP23.05■■□□□ 1.28
CUL4A-209ENST00000488558 THSD1Q9NS62 852 aa23.05■■□□□ 1.28
CUL4A-209ENST00000488558 RABGEF1Q9UJ41 708 aa23.05■■□□□ 1.28
CUL4A-209ENST00000488558 SATB2Q9UPW6 733 aa23.05■■□□□ 1.28
CUL4A-209ENST00000488558 D6RAR5 112 aa23.04■■□□□ 1.28
CUL4A-209ENST00000488558 SOD1P00441 154 aa23.04■■□□□ 1.28
CUL4A-209ENST00000488558 PRLP01236 227 aa23.04■■□□□ 1.28
CUL4A-209ENST00000488558 IVLP07476 585 aa23.04■■□□□ 1.28
CUL4A-209ENST00000488558 ZFXP17010 805 aaPredicted RBP23.04■■□□□ 1.28
CUL4A-209ENST00000488558 ITPKBP27987 946 aa23.04■■□□□ 1.28
CUL4A-209ENST00000488558 STC1P52823 247 aa23.04■■□□□ 1.28
CUL4A-209ENST00000488558 PTSQ03393 145 aa23.04■■□□□ 1.28
CUL4A-209ENST00000488558 NIPAL4Q0D2K0 466 aa23.04■■□□□ 1.28
CUL4A-209ENST00000488558 ILF3Q12906 894 aaKnown RBP eCLIP23.04■■□□□ 1.28
CUL4A-209ENST00000488558 PTPRRQ15256 657 aa23.04■■□□□ 1.28
CUL4A-209ENST00000488558 C14orf28Q4W4Y0 310 aa23.04■■□□□ 1.28
CUL4A-209ENST00000488558 C3orf38Q5JPI3 329 aa23.04■■□□□ 1.28
CUL4A-209ENST00000488558 NRSN1Q8IZ57 195 aa23.04■■□□□ 1.28
CUL4A-209ENST00000488558 WDR36Q8NI36 951 aaKnown RBP23.04■■□□□ 1.28
CUL4A-209ENST00000488558 KIAA1524Q8TCG1 905 aa23.04■■□□□ 1.28
CUL4A-209ENST00000488558 AP2M1Q96CW1 435 aa23.04■■□□□ 1.28
CUL4A-209ENST00000488558 LIN37Q96GY3 246 aaPredicted RBP23.04■■□□□ 1.28
CUL4A-209ENST00000488558 GFM1Q96RP9 751 aaKnown RBP23.04■■□□□ 1.28
CUL4A-209ENST00000488558 GSDMCQ9BYG8 508 aa23.04■■□□□ 1.28
CUL4A-209ENST00000488558 ABCG8Q9H221 673 aa23.04■■□□□ 1.28
CUL4A-209ENST00000488558 PCDH9Q9HC56 1237 aa23.04■■□□□ 1.28
CUL4A-209ENST00000488558 MOSPD1Q9UJG1 213 aa23.04■■□□□ 1.28
CUL4A-209ENST00000488558 CHKBQ9Y259 395 aa23.04■■□□□ 1.28
CUL4A-209ENST00000488558 CCDC187A0A096LP49 1063 aa23.03■■□□□ 1.28
CUL4A-209ENST00000488558 A0A1W2PNU3 283 aaPredicted RBP23.03■■□□□ 1.28
CUL4A-209ENST00000488558 TMX2-CTNND1H3BSU7 103 aa23.03■■□□□ 1.28
CUL4A-209ENST00000488558 APOL1O14791 398 aa23.03■■□□□ 1.28
CUL4A-209ENST00000488558 KRT1P04264 644 aa23.03■■□□□ 1.28
CUL4A-209ENST00000488558 GPR1P46091 355 aa23.03■■□□□ 1.28
CUL4A-209ENST00000488558 PEX6Q13608 980 aa23.03■■□□□ 1.28
CUL4A-209ENST00000488558 HLTFQ14527 1009 aaKnown RBP eCLIP23.03■■□□□ 1.28
CUL4A-209ENST00000488558 RHOT1Q8IXI2 618 aa23.03■■□□□ 1.28
CUL4A-209ENST00000488558 SCARF2Q96GP6 870 aaPredicted RBP23.03■■□□□ 1.28
CUL4A-209ENST00000488558 OLFM3Q96PB7 478 aa23.03■■□□□ 1.28
CUL4A-209ENST00000488558 LGMNQ99538 433 aa23.03■■□□□ 1.28
CUL4A-209ENST00000488558 SYNDIG1Q9H7V2 258 aa23.03■■□□□ 1.28
CUL4A-209ENST00000488558 DDX56Q9NY93 547 aaKnown RBP23.03■■□□□ 1.28
CUL4A-209ENST00000488558 A0A1W2PQM1 296 aa23.02■■□□□ 1.28
CUL4A-209ENST00000488558 GOLGA6CA6NDK9 693 aa23.02■■□□□ 1.28
CUL4A-209ENST00000488558 GOLGA6BA6NDN3 693 aa23.02■■□□□ 1.28
CUL4A-209ENST00000488558 B4DGG1 531 aa23.02■■□□□ 1.28
CUL4A-209ENST00000488558 KCNK1O00180 336 aa23.02■■□□□ 1.28
CUL4A-209ENST00000488558 CASC3O15234 703 aaKnown RBP23.02■■□□□ 1.28
CUL4A-209ENST00000488558 NUDT21O43809 227 aaKnown RBP23.02■■□□□ 1.28
CUL4A-209ENST00000488558 JCHAINP01591 159 aa23.02■■□□□ 1.28
CUL4A-209ENST00000488558 RPLP0P05388 317 aaKnown RBP23.02■■□□□ 1.28
CUL4A-209ENST00000488558 GOLGA6DP0CG33 693 aa23.02■■□□□ 1.28
CUL4A-209ENST00000488558 HADHBP55084 474 aaKnown RBP23.02■■□□□ 1.28
CUL4A-209ENST00000488558 EIF3IQ13347 325 aaKnown RBP23.02■■□□□ 1.28
CUL4A-209ENST00000488558 PDK1Q15118 436 aa23.02■■□□□ 1.28
CUL4A-209ENST00000488558 C17orf82Q86X59 251 aaPredicted RBP23.02■■□□□ 1.28
CUL4A-209ENST00000488558 CCNJLQ8IV13 435 aa23.02■■□□□ 1.28
CUL4A-209ENST00000488558 LPCAT1Q8NF37 534 aa23.02■■□□□ 1.28
CUL4A-209ENST00000488558 CCL4L1Q8NHW4 92 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms