RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 MYBPC2Q14324 1141 aa4.45□□□□□ -1.7
ITGB1-214ENST00000488427 HNF4GQ14541 408 aa4.45□□□□□ -1.7
ITGB1-214ENST00000488427 CALCRLQ16602 461 aa4.45□□□□□ -1.7
ITGB1-214ENST00000488427 GSTA3Q16772 222 aa4.45□□□□□ -1.7
ITGB1-214ENST00000488427 ESCO2Q56NI9 601 aa4.45□□□□□ -1.7
ITGB1-214ENST00000488427 PRAMEF19Q5SWL8 479 aa4.45□□□□□ -1.7
ITGB1-214ENST00000488427 UBAP2Q5T6F2 1119 aaKnown RBP4.45□□□□□ -1.7
ITGB1-214ENST00000488427 SHFQ7M4L6 423 aa4.45□□□□□ -1.7
ITGB1-214ENST00000488427 ZCCHC9Q8N567 271 aaKnown RBP4.45□□□□□ -1.7
ITGB1-214ENST00000488427 PARP16Q8N5Y8 322 aa4.45□□□□□ -1.7
ITGB1-214ENST00000488427 AADATQ8N5Z0 425 aa4.45□□□□□ -1.7
ITGB1-214ENST00000488427 NAXEQ8NCW5 288 aa4.45□□□□□ -1.7
ITGB1-214ENST00000488427 BEST2Q8NFU1 509 aa4.45□□□□□ -1.7
ITGB1-214ENST00000488427 MAGEC3Q8TD91 643 aa4.45□□□□□ -1.7
ITGB1-214ENST00000488427 NUDCD2Q8WVJ2 157 aa4.45□□□□□ -1.7
ITGB1-214ENST00000488427 ST8SIA4Q92187 359 aa4.45□□□□□ -1.7
ITGB1-214ENST00000488427 DUX5Q96PT3 197 aa4.45□□□□□ -1.7
ITGB1-214ENST00000488427 SEC62Q99442 399 aaKnown RBP4.45□□□□□ -1.7
ITGB1-214ENST00000488427 KRTAP1-5Q9BYS1 174 aa4.45□□□□□ -1.7
ITGB1-214ENST00000488427 C20orf141Q9NUB4 165 aa4.45□□□□□ -1.7
ITGB1-214ENST00000488427 CRYL1Q9Y2S2 319 aa4.45□□□□□ -1.7
ITGB1-214ENST00000488427 CYP46A1Q9Y6A2 500 aa4.45□□□□□ -1.7
ITGB1-214ENST00000488427 A3GALT2U3KPV4 340 aa4.45□□□□□ -1.7
ITGB1-214ENST00000488427 PAPPAQ13219 1627 aa4.45□□□□□ -1.7
ITGB1-214ENST00000488427 DUOX2Q9NRD8 1548 aa4.45□□□□□ -1.7
ITGB1-214ENST00000488427 C10orf71Q711Q0 1435 aa4.45□□□□□ -1.7
ITGB1-214ENST00000488427 ADGRF5Q8IZF2 1346 aa4.45□□□□□ -1.7
ITGB1-214ENST00000488427 PXDNLA1KZ92 1463 aa4.44□□□□□ -1.7
ITGB1-214ENST00000488427 NRXN3Q9Y4C0 1643 aa4.44□□□□□ -1.7
ITGB1-214ENST00000488427 LOC102724159A0A0B4J2E5 919 aa4.44□□□□□ -1.7
ITGB1-214ENST00000488427 A0A0U1RQF3 1178 aa4.44□□□□□ -1.7
ITGB1-214ENST00000488427 HSPB2A8KAH6 182 aa4.44□□□□□ -1.7
ITGB1-214ENST00000488427 RGS11O94810 467 aa4.44□□□□□ -1.7
ITGB1-214ENST00000488427 PYGLP06737 847 aa4.44□□□□□ -1.7
ITGB1-214ENST00000488427 HSPA8P11142 646 aaKnown RBP4.44□□□□□ -1.7
ITGB1-214ENST00000488427 KRT9P35527 623 aa4.44□□□□□ -1.7
ITGB1-214ENST00000488427 DSCR9P59020 149 aa4.44□□□□□ -1.7
ITGB1-214ENST00000488427 POU3F1Q03052 451 aaPredicted RBP4.44□□□□□ -1.7
ITGB1-214ENST00000488427 PWP2Q15269 919 aaKnown RBP4.44□□□□□ -1.7
ITGB1-214ENST00000488427 HSPB2Q16082 182 aa4.44□□□□□ -1.7
ITGB1-214ENST00000488427 ZNF667Q5HYK9 610 aa4.44□□□□□ -1.7
ITGB1-214ENST00000488427 CCDC70Q6NSX1 233 aa4.44□□□□□ -1.7
ITGB1-214ENST00000488427 MEPCEQ7L2J0 689 aaKnown RBP4.44□□□□□ -1.7
ITGB1-214ENST00000488427 CLIP4Q8N3C7 705 aa4.44□□□□□ -1.7
ITGB1-214ENST00000488427 SNAPC3Q92966 411 aa4.44□□□□□ -1.7
ITGB1-214ENST00000488427 CLK4Q9HAZ1 481 aaKnown RBP4.44□□□□□ -1.7
ITGB1-214ENST00000488427 SAGE1Q9NXZ1 904 aa4.44□□□□□ -1.7
ITGB1-214ENST00000488427 A4GNTQ9UNA3 340 aa4.44□□□□□ -1.7
ITGB1-214ENST00000488427 NFS1Q9Y697 457 aa4.44□□□□□ -1.7
ITGB1-214ENST00000488427 PIK3C2AO00443 1686 aa4.44□□□□□ -1.7
ITGB1-214ENST00000488427 RGPD8O14715 1765 aaPredicted RBP4.43□□□□□ -1.7
ITGB1-214ENST00000488427 CEP290O15078 2479 aa4.43□□□□□ -1.7
ITGB1-214ENST00000488427 A0A1B0GVC2 190 aa4.43□□□□□ -1.7
ITGB1-214ENST00000488427 DYTNA2CJ06 578 aa4.43□□□□□ -1.7
ITGB1-214ENST00000488427 LINC01553A4QN01 128 aa4.43□□□□□ -1.7
ITGB1-214ENST00000488427 BTBD18B2RXH4 712 aa4.43□□□□□ -1.7
ITGB1-214ENST00000488427 USP17L23D6RBM5 183 aa4.43□□□□□ -1.7
ITGB1-214ENST00000488427 SLC28A2O43868 658 aa4.43□□□□□ -1.7
ITGB1-214ENST00000488427 TACC1O75410 805 aa4.43□□□□□ -1.7
ITGB1-214ENST00000488427 PAPSS2O95340 614 aaPredicted RBP4.43□□□□□ -1.7
ITGB1-214ENST00000488427 TFP02787 698 aa4.43□□□□□ -1.7
ITGB1-214ENST00000488427 MMP2P08253 660 aa4.43□□□□□ -1.7
ITGB1-214ENST00000488427 ETFAP13804 333 aa4.43□□□□□ -1.7
ITGB1-214ENST00000488427 RRM1P23921 792 aa4.43□□□□□ -1.7
ITGB1-214ENST00000488427 RFX5P48382 616 aaPredicted RBP4.43□□□□□ -1.7
ITGB1-214ENST00000488427 TUBA1BP68363 451 aa4.43□□□□□ -1.7
ITGB1-214ENST00000488427 TBX2Q13207 712 aaPredicted RBP4.43□□□□□ -1.7
ITGB1-214ENST00000488427 TDGQ13569 410 aa4.43□□□□□ -1.7
ITGB1-214ENST00000488427 SLC39A14Q15043 492 aa4.43□□□□□ -1.7
ITGB1-214ENST00000488427 FAM69AQ5T7M9 428 aa4.43□□□□□ -1.7
ITGB1-214ENST00000488427 INTS11Q5TA45 600 aaKnown RBP4.43□□□□□ -1.7
ITGB1-214ENST00000488427 INO80CQ6PI98 192 aaPredicted RBP4.43□□□□□ -1.7
ITGB1-214ENST00000488427 KRBA2Q6ZNG9 492 aa4.43□□□□□ -1.7
ITGB1-214ENST00000488427 CCDC129Q6ZRS4 1044 aa4.43□□□□□ -1.7
ITGB1-214ENST00000488427 H1FNTQ75WM6 255 aaPredicted RBP4.43□□□□□ -1.7
ITGB1-214ENST00000488427 LINGO2Q7L985 606 aa4.43□□□□□ -1.7
ITGB1-214ENST00000488427 PAF1Q8N7H5 531 aa4.43□□□□□ -1.7
ITGB1-214ENST00000488427 KCNH5Q8NCM2 988 aa4.43□□□□□ -1.7
ITGB1-214ENST00000488427 AGBL3Q8NEM8 1001 aa4.43□□□□□ -1.7
ITGB1-214ENST00000488427 ADAMTS14Q8WXS8 1223 aa4.43□□□□□ -1.7
ITGB1-214ENST00000488427 KLHL15Q96M94 604 aa4.43□□□□□ -1.7
ITGB1-214ENST00000488427 CAMK1GQ96NX5 476 aa4.43□□□□□ -1.7
ITGB1-214ENST00000488427 SH3GL2Q99962 352 aa4.43□□□□□ -1.7
ITGB1-214ENST00000488427 NUF2Q9BZD4 464 aa4.43□□□□□ -1.7
ITGB1-214ENST00000488427 UBN1Q9NPG3 1134 aa4.43□□□□□ -1.7
ITGB1-214ENST00000488427 TAS2R10Q9NYW0 307 aa4.43□□□□□ -1.7
ITGB1-214ENST00000488427 SARDHQ9UL12 918 aa4.43□□□□□ -1.7
ITGB1-214ENST00000488427 AAR2Q9Y312 384 aaKnown RBP4.43□□□□□ -1.7
ITGB1-214ENST00000488427 OVOS2A0A0G2JMS6 1433 aa4.43□□□□□ -1.7
ITGB1-214ENST00000488427 OVOS2A0A0J9YW53 1432 aa4.43□□□□□ -1.7
ITGB1-214ENST00000488427 CCDC144AA2RUR9 1427 aa4.43□□□□□ -1.7
ITGB1-214ENST00000488427 TNS3Q68CZ2 1445 aa4.43□□□□□ -1.7
ITGB1-214ENST00000488427 OVOS2Q6IE36 1432 aa4.43□□□□□ -1.7
ITGB1-214ENST00000488427 IGLV5-37A0A075B6J1 123 aa4.42□□□□□ -1.7
ITGB1-214ENST00000488427 EIF3CLB5ME19 914 aaKnown RBP4.42□□□□□ -1.7
ITGB1-214ENST00000488427 TECPR2O15040 1411 aa4.42□□□□□ -1.7
ITGB1-214ENST00000488427 BCAT2O15382 392 aaPredicted RBP4.42□□□□□ -1.7
ITGB1-214ENST00000488427 HOXA11P31270 313 aaPredicted RBP4.42□□□□□ -1.7
ITGB1-214ENST00000488427 ELF1P32519 619 aa4.42□□□□□ -1.7
ITGB1-214ENST00000488427 STX2P32856 288 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms