RNA–Protein interactions for RNA: ENST00000488131.1

CDC42BPA-213, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-213ENST00000488131 COPZ1P61923 177 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 PSMC6P62333 389 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 RNF4P78317 190 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 FSTL1Q12841 308 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 NAB1Q13506 487 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 AQP6Q13520 282 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 DNASE1L3Q13609 305 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 KCNJ11Q14654 390 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 COG2Q14746 738 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 TAZQ16635 292 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 TFDP3Q5H9I0 405 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 ZNF484Q5JVG2 852 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 CCNYL2Q5T2Q4 361 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 ATG14Q6ZNE5 492 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 ENOSF1Q7L5Y1 443 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 ZNF720Q7Z2F6 126 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 SPRED1Q7Z699 444 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 ZAR1Q86SH2 424 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 SLC22A16Q86VW1 577 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 CTAGE3PQ8IX95 158 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 NDUFAF2Q8N183 169 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 FAM109AQ8N4B1 249 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 DTWD2Q8NBA8 298 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 OR6Q1Q8NGQ2 317 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 LILRB1Q8NHL6 650 aaPredicted RBP4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 GABPB2Q8TAK5 448 aaPredicted RBP4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 SLC2A14Q8TDB8 520 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 BRSK1Q8TDC3 778 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 CRYGNQ8WXF5 182 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 PPP1R14AQ96A00 147 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 RCN3Q96D15 328 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 HDAC11Q96DB2 347 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 LRRC39Q96DD0 335 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 CFAP36Q96G28 342 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 RCC1LQ96I51 464 aaKnown RBP4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 SPATA17Q96L03 361 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 CLUHP3Q96NS8 147 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 ACO2Q99798 780 aaKnown RBP4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 CIB1Q99828 191 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 GDF15Q99988 308 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 MTG1Q9BT17 334 aaPredicted RBP4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 BTBD2Q9BX70 525 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 GON7Q9BXV9 100 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 SEZ6LQ9BYH1 1024 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 GLT8D2Q9H1C3 349 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 NOL6Q9H6R4 1146 aaKnown RBP4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 PLAC1Q9HBJ0 212 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 POPDC2Q9HBU9 364 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 MRPL47Q9HD33 250 aaKnown RBP4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 TOPORSQ9NS56 1045 aaPredicted RBP4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 PNPOQ9NVS9 261 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 GFOD1Q9NXC2 390 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 MTRRQ9UBK8 725 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 CGGBP1Q9UFW8 167 aaPredicted RBP4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 MOSPD1Q9UJG1 213 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 FBXL21Q9UKT6 434 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 SCAF8Q9UPN6 1271 aaKnown RBP4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 AKT3Q9Y243 479 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 WBP11Q9Y2W2 641 aaKnown RBP4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 VWA7Q9Y334 891 aa4.77□□□□□ -1.65
CDC42BPA-213ENST00000488131 ARID2Q68CP9 1835 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 CNTNAP2Q9UHC6 1331 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 SAGE2PA6NJ88 616 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 SNTNA6NMZ2 147 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 FAM25AB3EWG3 89 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 FAM25CB3EWG5 89 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 FAM25GB3EWG6 89 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 TRIM77I1YAP6 450 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 SNAP23O00161 211 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 CCRL2O00421 344 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 TNPO2O14787 897 aaKnown RBP4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 ZW10O43264 779 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 ZC3H11AO75152 810 aaKnown RBP eCLIP4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 BCAS1O75363 584 aaPredicted RBP4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 AVILO75366 819 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 H2AFYO75367 372 aaKnown RBP4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 UPK1BO75841 260 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 KCNK2O95069 426 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 CSPG5O95196 566 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 KCNH1O95259 989 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 RASAL1O95294 804 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 NADKO95544 446 aaPredicted RBP4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 PRKCGP05129 697 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 JUNP05412 331 aaKnown RBP4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 CSH1P0DML2 217 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 CSH2P0DML3 217 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 RPL10P27635 214 aaKnown RBP4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 CCND2P30279 289 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 GRK3P35626 688 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 GJC1P36383 396 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 PTPN9P43378 593 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 PPP5CP53041 499 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 RAD23AP54725 363 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 PKNOX1P55347 436 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 RPL10AP62906 217 aaKnown RBP4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 YWHAZP63104 245 aaKnown RBP4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 PRAMEP78395 509 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 GCNT1Q02742 428 aa4.76□□□□□ -1.65
CDC42BPA-213ENST00000488131 ENPEPQ07075 957 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms