RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 FZD10Q9ULW2 581 aa2.92□□□□□ -1.94
R3HDM1-219ENST00000488035 GPR34Q9UPC5 381 aa2.92□□□□□ -1.94
R3HDM1-219ENST00000488035 A0A1W2PRG0 241 aa2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 C1orf226A1L170 272 aa2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 ANKRD18BA2A2Z9 1011 aa2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 TTC36A6NLP5 189 aa2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 PTGES3LE9PB15 166 aa2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 VWA5AO00534 786 aa2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 VILLO15195 856 aa2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 ZIC3O60481 467 aa2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 HNRNPCL1O60812 293 aaKnown RBP2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 NDUFB4O95168 129 aa2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 VNN2O95498 520 aa2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 IGKV3-20P01619 116 aa2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 LDHCP07864 332 aa2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 GABRB1P18505 474 aa2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 CHATP28329 748 aa2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 CDC25AP30304 524 aa2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 HNRNPH1P31943 449 aaKnown RBP2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 PPARGP37231 505 aaPredicted RBP2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 CASP2P42575 452 aa2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 BRWD1-AS2P59051 145 aa2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 PSMC6P62333 389 aa2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 ROR2Q01974 943 aaKnown RBP2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 NIPAL4Q0D2K0 466 aa2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 ST3GAL1Q11201 340 aa2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 ASTE1Q2TB18 679 aaPredicted RBP2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 USP41Q3LFD5 358 aa2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 SETMARQ53H47 684 aaPredicted RBP2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 C6orf141Q5SZD1 244 aa2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 LRIF1Q5T3J3 769 aa2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 FAM69BQ5VUD6 431 aa2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 CAPRIN2Q6IMN6 1127 aaKnown RBP2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 PDXDC1Q6P996 788 aa2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 C16orf54Q6UWD8 224 aa2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 PQLC2Q6ZP29 291 aa2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 SZRD1Q7Z422 152 aa2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 WDR63Q8IWG1 891 aa2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 SPATA6LQ8N4H0 392 aa2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 SCCPDHQ8NBX0 429 aa2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 HJURPQ8NCD3 748 aaPredicted RBP2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 AGBL3Q8NEM8 1001 aa2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 NEK9Q8TD19 979 aa2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 SCFD2Q8WU76 684 aa2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 MIB2Q96AX9 1013 aa2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 ARHGEF26Q96DR7 871 aa2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 ELMOD3Q96FG2 381 aa2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 TXNDC15Q96J42 360 aa2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 CMTM3Q96MX0 182 aa2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 ZNF570Q96NI8 536 aa2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 TMEM47Q9BQJ4 181 aa2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 SRSF8Q9BRL6 282 aaKnown RBP2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 DCLK3Q9C098 648 aa2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 PPP1R3EQ9H7J1 279 aa2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 MRPL44Q9H9J2 332 aaKnown RBP2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 MMP25Q9NPA2 562 aa2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 HINT3Q9NQE9 182 aaKnown RBP2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 RRP7BPQ9NSQ0 103 aa2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 SETD4Q9NVD3 440 aa2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 HAUS2Q9NVX0 235 aa2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 ADD3Q9UEY8 706 aaKnown RBP2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 RCOR1Q9UKL0 485 aa2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 CDC14AQ9UNH5 594 aa2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 UTYO14607 1347 aa2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 TCF20Q9UGU0 1960 aaKnown RBP2.91□□□□□ -1.94
R3HDM1-219ENST00000488035 A0A1B0GVM2 712 aa2.9□□□□□ -1.95
R3HDM1-219ENST00000488035 LINC01553A4QN01 128 aa2.9□□□□□ -1.95
R3HDM1-219ENST00000488035 OR6C75A6NL08 312 aa2.9□□□□□ -1.95
R3HDM1-219ENST00000488035 H3BQ06 376 aaPredicted RBP2.9□□□□□ -1.95
R3HDM1-219ENST00000488035 WNT9BO14905 357 aa2.9□□□□□ -1.95
R3HDM1-219ENST00000488035 NDUFS7O75251 213 aa2.9□□□□□ -1.95
R3HDM1-219ENST00000488035 IPO7O95373 1038 aaKnown RBP2.9□□□□□ -1.95
R3HDM1-219ENST00000488035 TUBBP07437 444 aa2.9□□□□□ -1.95
R3HDM1-219ENST00000488035 CLTBP09497 229 aa2.9□□□□□ -1.95
R3HDM1-219ENST00000488035 ZNF182P17025 639 aaPredicted RBP2.9□□□□□ -1.95
R3HDM1-219ENST00000488035 MAOAP21397 527 aa2.9□□□□□ -1.95
R3HDM1-219ENST00000488035 MCM3P25205 808 aa2.9□□□□□ -1.95
R3HDM1-219ENST00000488035 SSTR2P30874 369 aa2.9□□□□□ -1.95
R3HDM1-219ENST00000488035 ACSL1P33121 698 aa2.9□□□□□ -1.95
R3HDM1-219ENST00000488035 ACTN2P35609 894 aa2.9□□□□□ -1.95
R3HDM1-219ENST00000488035 RPL3P39023 403 aaKnown RBP2.9□□□□□ -1.95
R3HDM1-219ENST00000488035 AMTP48728 403 aa2.9□□□□□ -1.95
R3HDM1-219ENST00000488035 PCYT1AP49585 367 aa2.9□□□□□ -1.95
R3HDM1-219ENST00000488035 PDLIM4P50479 330 aa2.9□□□□□ -1.95
R3HDM1-219ENST00000488035 GALCP54803 685 aa2.9□□□□□ -1.95
R3HDM1-219ENST00000488035 MC1RQ01726 317 aa2.9□□□□□ -1.95
R3HDM1-219ENST00000488035 CREB5Q02930 508 aa2.9□□□□□ -1.95
R3HDM1-219ENST00000488035 GOLGA8DPQ0D2H9 430 aa2.9□□□□□ -1.95
R3HDM1-219ENST00000488035 TOMM20Q15388 145 aa2.9□□□□□ -1.95
R3HDM1-219ENST00000488035 DUSP28Q4G0W2 176 aa2.9□□□□□ -1.95
R3HDM1-219ENST00000488035 DCAF6Q58WW2 860 aa2.9□□□□□ -1.95
R3HDM1-219ENST00000488035 SPATA1Q5VX52 437 aa2.9□□□□□ -1.95
R3HDM1-219ENST00000488035 TMEM198Q66K66 360 aa2.9□□□□□ -1.95
R3HDM1-219ENST00000488035 TYW3Q6IPR3 259 aaKnown RBP2.9□□□□□ -1.95
R3HDM1-219ENST00000488035 PLEKHA7Q6IQ23 1121 aa2.9□□□□□ -1.95
R3HDM1-219ENST00000488035 ZNF280DQ6N043 979 aa2.9□□□□□ -1.95
R3HDM1-219ENST00000488035 GLDNQ6ZMI3 551 aaPredicted RBP2.9□□□□□ -1.95
R3HDM1-219ENST00000488035 SEPT14Q6ZU15 432 aa2.9□□□□□ -1.95
R3HDM1-219ENST00000488035 DPPA4Q7L190 304 aa2.9□□□□□ -1.95
R3HDM1-219ENST00000488035 CHST9Q7L1S5 443 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms