RNA–Protein interactions for RNA: ENST00000487939.1

PTEN-204, Transcript of phosphatase and tensin homolog, humanhuman

TSL 3

Gene PTEN, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTEN-204ENST00000487939 SNRNP70P08621 437 aaKnown RBP4.44□□□□□ -1.7
PTEN-204ENST00000487939 CLCNKAP51800 687 aa4.44□□□□□ -1.7
PTEN-204ENST00000487939 KRTAP10-7P60409 375 aaPredicted RBP4.44□□□□□ -1.7
PTEN-204ENST00000487939 RPL36AP83881 106 aaKnown RBP4.44□□□□□ -1.7
PTEN-204ENST00000487939 TMEM115Q12893 351 aaPredicted RBP4.44□□□□□ -1.7
PTEN-204ENST00000487939 EIF2S3LQ2VIR3 472 aaKnown RBP4.44□□□□□ -1.7
PTEN-204ENST00000487939 SETMARQ53H47 684 aaPredicted RBP4.44□□□□□ -1.7
PTEN-204ENST00000487939 SIGIRRQ6IA17 410 aa4.44□□□□□ -1.7
PTEN-204ENST00000487939 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.44□□□□□ -1.7
PTEN-204ENST00000487939 PQLC2Q6ZP29 291 aa4.44□□□□□ -1.7
PTEN-204ENST00000487939 CACNA2D4Q7Z3S7 1137 aa4.44□□□□□ -1.7
PTEN-204ENST00000487939 HAPLN4Q86UW8 402 aa4.44□□□□□ -1.7
PTEN-204ENST00000487939 TEX19Q8NA77 164 aa4.44□□□□□ -1.7
PTEN-204ENST00000487939 KCNH5Q8NCM2 988 aa4.44□□□□□ -1.7
PTEN-204ENST00000487939 TANKQ92844 425 aa4.44□□□□□ -1.7
PTEN-204ENST00000487939 MPP4Q96JB8 637 aa4.44□□□□□ -1.7
PTEN-204ENST00000487939 CSF3RQ99062 836 aa4.44□□□□□ -1.7
PTEN-204ENST00000487939 ABI3Q9P2A4 366 aa4.44□□□□□ -1.7
PTEN-204ENST00000487939 LIMA1Q9UHB6 759 aaKnown RBP4.44□□□□□ -1.7
PTEN-204ENST00000487939 VDAC3Q9Y277 283 aa4.44□□□□□ -1.7
PTEN-204ENST00000487939 FAM237AA0A1B0GTK4 181 aa4.43□□□□□ -1.7
PTEN-204ENST00000487939 CLGNO14967 610 aa4.43□□□□□ -1.7
PTEN-204ENST00000487939 MBD4O95243 580 aa4.43□□□□□ -1.7
PTEN-204ENST00000487939 IPO7O95373 1038 aaKnown RBP4.43□□□□□ -1.7
PTEN-204ENST00000487939 TBX18O95935 607 aa4.43□□□□□ -1.7
PTEN-204ENST00000487939 FTCDO95954 541 aa4.43□□□□□ -1.7
PTEN-204ENST00000487939 LINC00271P0C7V0 271 aa4.43□□□□□ -1.7
PTEN-204ENST00000487939 CHMP24386 653 aa4.43□□□□□ -1.7
PTEN-204ENST00000487939 ICAM3P32942 547 aa4.43□□□□□ -1.7
PTEN-204ENST00000487939 HNRNPH2P55795 449 aaKnown RBP4.43□□□□□ -1.7
PTEN-204ENST00000487939 ZNF155Q12901 538 aaPredicted RBP4.43□□□□□ -1.7
PTEN-204ENST00000487939 CSTF3Q12996 717 aaKnown RBP4.43□□□□□ -1.7
PTEN-204ENST00000487939 DDX10Q13206 875 aaKnown RBP4.43□□□□□ -1.7
PTEN-204ENST00000487939 FRG1Q14331 258 aaKnown RBP4.43□□□□□ -1.7
PTEN-204ENST00000487939 TBCEQ15813 527 aaPredicted RBP4.43□□□□□ -1.7
PTEN-204ENST00000487939 PAPPA-AS1Q5QFB9 102 aa4.43□□□□□ -1.7
PTEN-204ENST00000487939 FAAH2Q6GMR7 532 aa4.43□□□□□ -1.7
PTEN-204ENST00000487939 TMTC3Q6ZXV5 915 aa4.43□□□□□ -1.7
PTEN-204ENST00000487939 PPHLN1Q8NEY8 458 aaKnown RBP4.43□□□□□ -1.7
PTEN-204ENST00000487939 TDRD7Q8NHU6 1098 aaKnown RBP4.43□□□□□ -1.7
PTEN-204ENST00000487939 RND1Q92730 232 aa4.43□□□□□ -1.7
PTEN-204ENST00000487939 RETREG1Q9H6L5 497 aa4.43□□□□□ -1.7
PTEN-204ENST00000487939 FBRSL1Q9HCM7 1045 aaKnown RBP4.43□□□□□ -1.7
PTEN-204ENST00000487939 DIAPH3Q9NSV4 1193 aa4.43□□□□□ -1.7
PTEN-204ENST00000487939 OLA1Q9NTK5 396 aaKnown RBP4.43□□□□□ -1.7
PTEN-204ENST00000487939 TINAGQ9UJW2 476 aa4.43□□□□□ -1.7
PTEN-204ENST00000487939 A0A1B0GUV1 79 aa4.42□□□□□ -1.7
PTEN-204ENST00000487939 TGFB1I1O43294 461 aa4.42□□□□□ -1.7
PTEN-204ENST00000487939 CD4P01730 458 aa4.42□□□□□ -1.7
PTEN-204ENST00000487939 PAX3P23760 479 aa4.42□□□□□ -1.7
PTEN-204ENST00000487939 BDKRB2P30411 391 aa4.42□□□□□ -1.7
PTEN-204ENST00000487939 HOXC9P31274 260 aa4.42□□□□□ -1.7
PTEN-204ENST00000487939 MAN1A1P33908 653 aa4.42□□□□□ -1.7
PTEN-204ENST00000487939 RPS3AP61247 264 aaKnown RBP4.42□□□□□ -1.7
PTEN-204ENST00000487939 CSNK2A1P68400 391 aaPredicted RBP4.42□□□□□ -1.7
PTEN-204ENST00000487939 EEF1A2Q05639 463 aaKnown RBP4.42□□□□□ -1.7
PTEN-204ENST00000487939 WBP2NLQ6ICG8 309 aa4.42□□□□□ -1.7
PTEN-204ENST00000487939 RGMBQ6NW40 437 aa4.42□□□□□ -1.7
PTEN-204ENST00000487939 UNQ6126/PRO20091Q6UXV3 157 aa4.42□□□□□ -1.7
PTEN-204ENST00000487939 EXOC3L1Q86VI1 746 aa4.42□□□□□ -1.7
PTEN-204ENST00000487939 SFR1Q86XK3 245 aa4.42□□□□□ -1.7
PTEN-204ENST00000487939 FOXRED2Q8IWF2 684 aa4.42□□□□□ -1.7
PTEN-204ENST00000487939 TMEM116Q8NCL8 245 aa4.42□□□□□ -1.7
PTEN-204ENST00000487939 SMRP1Q8NCR6 262 aa4.42□□□□□ -1.7
PTEN-204ENST00000487939 CSNK2A3Q8NEV1 391 aa4.42□□□□□ -1.7
PTEN-204ENST00000487939 UCMAQ8WVF2 138 aa4.42□□□□□ -1.7
PTEN-204ENST00000487939 SGCDQ92629 289 aa4.42□□□□□ -1.7
PTEN-204ENST00000487939 HDAC2Q92769 488 aaKnown RBP4.42□□□□□ -1.7
PTEN-204ENST00000487939 MMABQ96EY8 250 aaPredicted RBP4.42□□□□□ -1.7
PTEN-204ENST00000487939 RRNAD1Q96FB5 475 aaKnown RBP4.42□□□□□ -1.7
PTEN-204ENST00000487939 TMEM19Q96HH6 336 aa4.42□□□□□ -1.7
PTEN-204ENST00000487939 IL17FQ96PD4 163 aa4.42□□□□□ -1.7
PTEN-204ENST00000487939 PCGF1Q9BSM1 259 aa4.42□□□□□ -1.7
PTEN-204ENST00000487939 C1QTNF5Q9BXJ0 243 aa4.42□□□□□ -1.7
PTEN-204ENST00000487939 MMP25Q9NPA2 562 aa4.42□□□□□ -1.7
PTEN-204ENST00000487939 EHD2Q9NZN4 543 aa4.42□□□□□ -1.7
PTEN-204ENST00000487939 C1RLQ9NZP8 487 aa4.42□□□□□ -1.7
PTEN-204ENST00000487939 AASSQ9UDR5 926 aa4.42□□□□□ -1.7
PTEN-204ENST00000487939 AMDHD2Q9Y303 409 aa4.42□□□□□ -1.7
PTEN-204ENST00000487939 KCNE2Q9Y6J6 123 aa4.42□□□□□ -1.7
PTEN-204ENST00000487939 MAU2Q9Y6X3 613 aa4.42□□□□□ -1.7
PTEN-204ENST00000487939 TDRD9Q8NDG6 1382 aaKnown RBP4.41□□□□□ -1.7
PTEN-204ENST00000487939 IGHV4OR15-8A0A075B7B6 117 aa4.41□□□□□ -1.7
PTEN-204ENST00000487939 HNRNPCL2B2RXH8 293 aa4.41□□□□□ -1.7
PTEN-204ENST00000487939 VCYO14598 125 aa4.41□□□□□ -1.7
PTEN-204ENST00000487939 MID1O15344 667 aa4.41□□□□□ -1.7
PTEN-204ENST00000487939 SLC25A12O75746 678 aa4.41□□□□□ -1.7
PTEN-204ENST00000487939 NKX2-2O95096 273 aa4.41□□□□□ -1.7
PTEN-204ENST00000487939 IL7RP16871 459 aa4.41□□□□□ -1.7
PTEN-204ENST00000487939 RGS2P41220 211 aa4.41□□□□□ -1.7
PTEN-204ENST00000487939 FASLGP48023 281 aa4.41□□□□□ -1.7
PTEN-204ENST00000487939 ERVFC1-1P60608 527 aa4.41□□□□□ -1.7
PTEN-204ENST00000487939 ZBED6P86452 979 aa4.41□□□□□ -1.7
PTEN-204ENST00000487939 FOXM1Q08050 763 aa4.41□□□□□ -1.7
PTEN-204ENST00000487939 CXorf66Q5JRM2 361 aaPredicted RBP4.41□□□□□ -1.7
PTEN-204ENST00000487939 FRG2Q64ET8 278 aa4.41□□□□□ -1.7
PTEN-204ENST00000487939 HIST2H2BCQ6DN03 193 aa4.41□□□□□ -1.7
PTEN-204ENST00000487939 HIST2H2BDQ6DRA6 164 aa4.41□□□□□ -1.7
PTEN-204ENST00000487939 DPPA4Q7L190 304 aa4.41□□□□□ -1.7
PTEN-204ENST00000487939 CHERPQ8IWX8 916 aaKnown RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms