RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 ODF2Q5BJF6 829 aa7.18□□□□□ -1.26
UBE4B-209ENST00000487244 TFDP3Q5H9I0 405 aa7.18□□□□□ -1.26
UBE4B-209ENST00000487244 DENND2CQ68D51 928 aa7.18□□□□□ -1.26
UBE4B-209ENST00000487244 FOXR1Q6PIV2 292 aa7.18□□□□□ -1.26
UBE4B-209ENST00000487244 RFLNAQ6ZTI6 216 aa7.18□□□□□ -1.26
UBE4B-209ENST00000487244 HSD11B1LQ7Z5J1 315 aa7.18□□□□□ -1.26
UBE4B-209ENST00000487244 GLRX5Q86SX6 157 aa7.18□□□□□ -1.26
UBE4B-209ENST00000487244 NT5DC3Q86UY8 548 aa7.18□□□□□ -1.26
UBE4B-209ENST00000487244 ZC3H18Q86VM9 953 aaKnown RBP7.18□□□□□ -1.26
UBE4B-209ENST00000487244 CCDC50Q8IVM0 306 aa7.18□□□□□ -1.26
UBE4B-209ENST00000487244 RBFAQ8N0V3 343 aa7.18□□□□□ -1.26
UBE4B-209ENST00000487244 BBS5Q8N3I7 341 aa7.18□□□□□ -1.26
UBE4B-209ENST00000487244 SLC25A45Q8N413 288 aa7.18□□□□□ -1.26
UBE4B-209ENST00000487244 EID2Q8N6I1 236 aa7.18□□□□□ -1.26
UBE4B-209ENST00000487244 DENND6BQ8NEG7 585 aa7.18□□□□□ -1.26
UBE4B-209ENST00000487244 PIH1D2Q8WWB5 315 aa7.18□□□□□ -1.26
UBE4B-209ENST00000487244 ASB12Q8WXK4 309 aa7.18□□□□□ -1.26
UBE4B-209ENST00000487244 ZNF830Q96NB3 372 aaPredicted RBP7.18□□□□□ -1.26
UBE4B-209ENST00000487244 AGAP3Q96P47 875 aa7.18□□□□□ -1.26
UBE4B-209ENST00000487244 UCN2Q96RP3 112 aa7.18□□□□□ -1.26
UBE4B-209ENST00000487244 FAM118BQ9BPY3 351 aa7.18□□□□□ -1.26
UBE4B-209ENST00000487244 HEMGNQ9BXL5 484 aa7.18□□□□□ -1.26
UBE4B-209ENST00000487244 TDRD1Q9BXT4 1180 aaKnown RBP7.18□□□□□ -1.26
UBE4B-209ENST00000487244 MAK16Q9BXY0 300 aaKnown RBP7.18□□□□□ -1.26
UBE4B-209ENST00000487244 POLR1EQ9GZS1 481 aaKnown RBP7.18□□□□□ -1.26
UBE4B-209ENST00000487244 C10orf88Q9H8K7 445 aa7.18□□□□□ -1.26
UBE4B-209ENST00000487244 LUC7LQ9NQ29 371 aaKnown RBP7.18□□□□□ -1.26
UBE4B-209ENST00000487244 DNAJC28Q9NX36 388 aa7.18□□□□□ -1.26
UBE4B-209ENST00000487244 SEPT10Q9P0V9 454 aa7.18□□□□□ -1.26
UBE4B-209ENST00000487244 CHKBQ9Y259 395 aa7.18□□□□□ -1.26
UBE4B-209ENST00000487244 OR1A2Q9Y585 309 aa7.18□□□□□ -1.26
UBE4B-209ENST00000487244 HS3ST3A1Q9Y663 406 aa7.18□□□□□ -1.26
UBE4B-209ENST00000487244 BPTFQ12830 3046 aa7.18□□□□□ -1.26
UBE4B-209ENST00000487244 COL27A1Q8IZC6 1860 aaPredicted RBP7.17□□□□□ -1.26
UBE4B-209ENST00000487244 DMXL2Q8TDJ6 3036 aa7.17□□□□□ -1.26
UBE4B-209ENST00000487244 F5H423 210 aaPredicted RBP7.17□□□□□ -1.26
UBE4B-209ENST00000487244 MAGEC1O60732 1142 aa7.17□□□□□ -1.26
UBE4B-209ENST00000487244 PIAS2O75928 621 aa7.17□□□□□ -1.26
UBE4B-209ENST00000487244 HEXIM1O94992 359 aaKnown RBP7.17□□□□□ -1.26
UBE4B-209ENST00000487244 ZRANB2O95218 330 aaKnown RBP eCLIP7.17□□□□□ -1.26
UBE4B-209ENST00000487244 CELA2BP08218 269 aaPredicted RBP7.17□□□□□ -1.26
UBE4B-209ENST00000487244 GIMD1P0DJR0 217 aa7.17□□□□□ -1.26
UBE4B-209ENST00000487244 MYF5P13349 255 aa7.17□□□□□ -1.26
UBE4B-209ENST00000487244 NME1P15531 152 aaKnown RBP7.17□□□□□ -1.26
UBE4B-209ENST00000487244 PTPN3P26045 913 aa7.17□□□□□ -1.26
UBE4B-209ENST00000487244 VIPR1P32241 457 aa7.17□□□□□ -1.26
UBE4B-209ENST00000487244 HNF1BP35680 557 aa7.17□□□□□ -1.26
UBE4B-209ENST00000487244 ETV3P41162 512 aa7.17□□□□□ -1.26
UBE4B-209ENST00000487244 RABIFP47224 123 aa7.17□□□□□ -1.26
UBE4B-209ENST00000487244 PEX5P50542 639 aa7.17□□□□□ -1.26
UBE4B-209ENST00000487244 ATP1A2P50993 1020 aa7.17□□□□□ -1.26
UBE4B-209ENST00000487244 CLDN6P56747 220 aa7.17□□□□□ -1.26
UBE4B-209ENST00000487244 WASHC5Q12768 1159 aa7.17□□□□□ -1.26
UBE4B-209ENST00000487244 DNAJC3Q13217 504 aa7.17□□□□□ -1.26
UBE4B-209ENST00000487244 ZNF211Q13398 564 aaPredicted RBP7.17□□□□□ -1.26
UBE4B-209ENST00000487244 INPP5AQ14642 412 aa7.17□□□□□ -1.26
UBE4B-209ENST00000487244 ACOX1Q15067 660 aa7.17□□□□□ -1.26
UBE4B-209ENST00000487244 PDK1Q15118 436 aa7.17□□□□□ -1.26
UBE4B-209ENST00000487244 CCDC157Q569K6 752 aa7.17□□□□□ -1.26
UBE4B-209ENST00000487244 RALGPS1Q5JS13 557 aa7.17□□□□□ -1.26
UBE4B-209ENST00000487244 ARMC12Q5T9G4 340 aa7.17□□□□□ -1.26
UBE4B-209ENST00000487244 BBS12Q6ZW61 710 aa7.17□□□□□ -1.26
UBE4B-209ENST00000487244 KDELC2Q7Z4H8 507 aa7.17□□□□□ -1.26
UBE4B-209ENST00000487244 ZSCAN30Q86W11 494 aa7.17□□□□□ -1.26
UBE4B-209ENST00000487244 PARGQ86W56 976 aa7.17□□□□□ -1.26
UBE4B-209ENST00000487244 MARCH9Q86YJ5 346 aa7.17□□□□□ -1.26
UBE4B-209ENST00000487244 RCOR2Q8IZ40 523 aa7.17□□□□□ -1.26
UBE4B-209ENST00000487244 CHCHD4Q8N4Q1 142 aa7.17□□□□□ -1.26
UBE4B-209ENST00000487244 OXR1Q8N573 874 aa7.17□□□□□ -1.26
UBE4B-209ENST00000487244 ZNF548Q8NEK5 533 aaPredicted RBP7.17□□□□□ -1.26
UBE4B-209ENST00000487244 LPCAT1Q8NF37 534 aa7.17□□□□□ -1.26
UBE4B-209ENST00000487244 EXD1Q8NHP7 514 aa7.17□□□□□ -1.26
UBE4B-209ENST00000487244 SPATA22Q8NHS9 363 aa7.17□□□□□ -1.26
UBE4B-209ENST00000487244 KIAA1524Q8TCG1 905 aa7.17□□□□□ -1.26
UBE4B-209ENST00000487244 COQ10AQ96MF6 247 aa7.17□□□□□ -1.26
UBE4B-209ENST00000487244 MCCC1Q96RQ3 725 aaPredicted RBP7.17□□□□□ -1.26
UBE4B-209ENST00000487244 RBM15Q96T37 977 aaKnown RBP eCLIP7.17□□□□□ -1.26
UBE4B-209ENST00000487244 SCNM1Q9BWG6 230 aa7.17□□□□□ -1.26
UBE4B-209ENST00000487244 LGR4Q9BXB1 951 aa7.17□□□□□ -1.26
UBE4B-209ENST00000487244 C1QTNF7Q9BXJ2 289 aa7.17□□□□□ -1.26
UBE4B-209ENST00000487244 CUEDC1Q9NWM3 386 aaPredicted RBP7.17□□□□□ -1.26
UBE4B-209ENST00000487244 FTSJ1Q9UET6 329 aa7.17□□□□□ -1.26
UBE4B-209ENST00000487244 KLK13Q9UKR3 277 aa7.17□□□□□ -1.26
UBE4B-209ENST00000487244 PCDHA3Q9Y5H8 950 aa7.17□□□□□ -1.26
UBE4B-209ENST00000487244 ASPMQ8IZT6 3477 aa7.17□□□□□ -1.26
UBE4B-209ENST00000487244 WDFY3Q8IZQ1 3526 aa7.17□□□□□ -1.26
UBE4B-209ENST00000487244 APC2O95996 2303 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 LY6G6EA0A0G2JKS1 128 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 A0A0J9YYE9 177 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 CAPN8A6NHC0 703 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 TMEM229AB2RXF0 380 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 PPP1R12AO14974 1030 aaPredicted RBP7.16□□□□□ -1.26
UBE4B-209ENST00000487244 YKT6O15498 198 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 DDX3YO15523 660 aaKnown RBP7.16□□□□□ -1.26
UBE4B-209ENST00000487244 TNFSF14O43557 240 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 SIGLEC6O43699 453 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 GCATO75600 419 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 DKK1O94907 266 aa7.16□□□□□ -1.26
UBE4B-209ENST00000487244 MT-CYBP00156 380 aaPredicted RBP7.16□□□□□ -1.26
UBE4B-209ENST00000487244 TRBC1P01850 177 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms