RNA–Protein interactions for RNA: ENST00000486991.1

NR1H3-223, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 4

Gene NR1H3, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-223	ENST00000486991	FCRL5	Q96RD9	977 aa		13.13	□□□□□ -0.31
NR1H3-223	ENST00000486991	HDAC8	Q9BY41	377 aa		13.13	□□□□□ -0.31
NR1H3-223	ENST00000486991	DPH5	Q9H2P9	285 aa		13.13	□□□□□ -0.31
NR1H3-223	ENST00000486991	NOD2	Q9HC29	1040 aa		13.13	□□□□□ -0.31
NR1H3-223	ENST00000486991	PREB	Q9HCU5	417 aa		13.13	□□□□□ -0.31
NR1H3-223	ENST00000486991	DKK4	Q9UBT3	224 aa		13.13	□□□□□ -0.31
NR1H3-223	ENST00000486991	IL36A	Q9UHA7	158 aa		13.13	□□□□□ -0.31
NR1H3-223	ENST00000486991	UTP11	Q9Y3A2	253 aa	Known RBP	13.13	□□□□□ -0.31
NR1H3-223	ENST00000486991	EFCAB8	A8MWE9	144 aa		13.12	□□□□□ -0.31
NR1H3-223	ENST00000486991		E7EVH7	732 aa		13.12	□□□□□ -0.31
NR1H3-223	ENST00000486991	TLX3	O43711	291 aa	Predicted RBP	13.12	□□□□□ -0.31
NR1H3-223	ENST00000486991	RNGTT	O60942	597 aa	Known RBP	13.12	□□□□□ -0.31
NR1H3-223	ENST00000486991	PMPCB	O75439	489 aa		13.12	□□□□□ -0.31
NR1H3-223	ENST00000486991	ANXA9	O76027	345 aa		13.12	□□□□□ -0.31
NR1H3-223	ENST00000486991	HEXIM1	O94992	359 aa	Known RBP	13.12	□□□□□ -0.31
NR1H3-223	ENST00000486991	POP4	O95707	220 aa	Known RBP	13.12	□□□□□ -0.31
NR1H3-223	ENST00000486991	MT-CYB	P00156	380 aa	Predicted RBP	13.12	□□□□□ -0.31
NR1H3-223	ENST00000486991	MMP2	P08253	660 aa		13.12	□□□□□ -0.31
NR1H3-223	ENST00000486991	RHOXF2B	P0C7M4	288 aa		13.12	□□□□□ -0.31
NR1H3-223	ENST00000486991	CES1	P23141	567 aa		13.12	□□□□□ -0.31
NR1H3-223	ENST00000486991	ITGB7	P26010	798 aa		13.12	□□□□□ -0.31
NR1H3-223	ENST00000486991	CD38	P28907	300 aa		13.12	□□□□□ -0.31
NR1H3-223	ENST00000486991	LMAN1	P49257	510 aa		13.12	□□□□□ -0.31
NR1H3-223	ENST00000486991	GEM	P55040	296 aa		13.12	□□□□□ -0.31
NR1H3-223	ENST00000486991	SKOR1	P84550	965 aa		13.12	□□□□□ -0.31
NR1H3-223	ENST00000486991	RAD51	Q06609	339 aa		13.12	□□□□□ -0.31
NR1H3-223	ENST00000486991	STAT4	Q14765	748 aa		13.12	□□□□□ -0.31
NR1H3-223	ENST00000486991	TMEM259	Q4ZIN3	620 aa		13.12	□□□□□ -0.31
NR1H3-223	ENST00000486991	GLE1	Q53GS7	698 aa	Known RBP	13.12	□□□□□ -0.31
NR1H3-223	ENST00000486991	RALGPS1	Q5JS13	557 aa		13.12	□□□□□ -0.31
NR1H3-223	ENST00000486991	ALG1L	Q6GMV1	187 aa		13.12	□□□□□ -0.31
NR1H3-223	ENST00000486991	NAPEPLD	Q6IQ20	393 aa		13.12	□□□□□ -0.31
NR1H3-223	ENST00000486991	PARS2	Q7L3T8	475 aa	Known RBP	13.12	□□□□□ -0.31
NR1H3-223	ENST00000486991	SPATS2	Q86XZ4	545 aa	Known RBP	13.12	□□□□□ -0.31
NR1H3-223	ENST00000486991	OXR1	Q8N573	874 aa		13.12	□□□□□ -0.31
NR1H3-223	ENST00000486991	PAF1	Q8N7H5	531 aa		13.12	□□□□□ -0.31
NR1H3-223	ENST00000486991	TMEM145	Q8NBT3	493 aa		13.12	□□□□□ -0.31
NR1H3-223	ENST00000486991	SAP25	Q8TEE9	199 aa		13.12	□□□□□ -0.31
NR1H3-223	ENST00000486991	LRRC45	Q96CN5	670 aa		13.12	□□□□□ -0.31
NR1H3-223	ENST00000486991	OXNAD1	Q96HP4	312 aa	Predicted RBP	13.12	□□□□□ -0.31
NR1H3-223	ENST00000486991	SERAC1	Q96JX3	654 aa		13.12	□□□□□ -0.31
NR1H3-223	ENST00000486991	HEPH	Q9BQS7	1158 aa		13.12	□□□□□ -0.31
NR1H3-223	ENST00000486991	RHOXF2	Q9BQY4	288 aa		13.12	□□□□□ -0.31
NR1H3-223	ENST00000486991	ERP44	Q9BS26	406 aa		13.12	□□□□□ -0.31
NR1H3-223	ENST00000486991	RAB17	Q9H0T7	212 aa		13.12	□□□□□ -0.31
NR1H3-223	ENST00000486991	ETNK1	Q9HBU6	452 aa		13.12	□□□□□ -0.31
NR1H3-223	ENST00000486991	FAM153A	Q9UHL3	310 aa		13.12	□□□□□ -0.31
NR1H3-223	ENST00000486991	ZFR2	Q9UPR6	939 aa	Known RBP	13.12	□□□□□ -0.31
NR1H3-223	ENST00000486991	CA5B	Q9Y2D0	317 aa		13.12	□□□□□ -0.31
NR1H3-223	ENST00000486991	LRP4	O75096	1905 aa		13.11	□□□□□ -0.31
NR1H3-223	ENST00000486991		A0A087WV48	116 aa		13.11	□□□□□ -0.31
NR1H3-223	ENST00000486991	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	13.11	□□□□□ -0.31
NR1H3-223	ENST00000486991	GOLGA6C	A6NDK9	693 aa		13.11	□□□□□ -0.31
NR1H3-223	ENST00000486991	GOLGA6B	A6NDN3	693 aa		13.11	□□□□□ -0.31
NR1H3-223	ENST00000486991	PIGN	O95427	931 aa		13.11	□□□□□ -0.31
NR1H3-223	ENST00000486991	GOLGA6D	P0CG33	693 aa		13.11	□□□□□ -0.31
NR1H3-223	ENST00000486991	JUP	P14923	745 aa		13.11	□□□□□ -0.31
NR1H3-223	ENST00000486991	MAT2A	P31153	395 aa	Known RBP	13.11	□□□□□ -0.31
NR1H3-223	ENST00000486991	ARRB1	P49407	418 aa	Predicted RBP	13.11	□□□□□ -0.31
NR1H3-223	ENST00000486991	SEMG2	Q02383	582 aa		13.11	□□□□□ -0.31
NR1H3-223	ENST00000486991	BCL2L1	Q07817	233 aa		13.11	□□□□□ -0.31
NR1H3-223	ENST00000486991	TARDBP	Q13148	414 aa	Known RBP eCLIP	13.11	□□□□□ -0.31
NR1H3-223	ENST00000486991	SEMA5A	Q13591	1074 aa		13.11	□□□□□ -0.31
NR1H3-223	ENST00000486991	FGL2	Q14314	439 aa		13.11	□□□□□ -0.31
NR1H3-223	ENST00000486991	PCSK7	Q16549	785 aa		13.11	□□□□□ -0.31
NR1H3-223	ENST00000486991	ZNF284	Q2VY69	593 aa		13.11	□□□□□ -0.31
NR1H3-223	ENST00000486991	SETMAR	Q53H47	684 aa	Predicted RBP	13.11	□□□□□ -0.31
NR1H3-223	ENST00000486991	IZUMO3	Q5VZ72	239 aa		13.11	□□□□□ -0.31
NR1H3-223	ENST00000486991	ERN2	Q76MJ5	926 aa	Known RBP	13.11	□□□□□ -0.31
NR1H3-223	ENST00000486991	KDELC2	Q7Z4H8	507 aa		13.11	□□□□□ -0.31
NR1H3-223	ENST00000486991	IQCH	Q86VS3	1027 aa		13.11	□□□□□ -0.31
NR1H3-223	ENST00000486991	CAMK1D	Q8IU85	385 aa		13.11	□□□□□ -0.31
NR1H3-223	ENST00000486991	MFSD2A	Q8NA29	543 aa		13.11	□□□□□ -0.31
NR1H3-223	ENST00000486991	IPMK	Q8NFU5	416 aa		13.11	□□□□□ -0.31
NR1H3-223	ENST00000486991	PDCD6IP	Q8WUM4	868 aa	Known RBP	13.11	□□□□□ -0.31
NR1H3-223	ENST00000486991	NSMCE3	Q96MG7	304 aa		13.11	□□□□□ -0.31
NR1H3-223	ENST00000486991	PPP1R2P1	Q96PQ5	205 aa		13.11	□□□□□ -0.31
NR1H3-223	ENST00000486991	GORASP1	Q9BQQ3	440 aa		13.11	□□□□□ -0.31
NR1H3-223	ENST00000486991	MLPH	Q9BV36	600 aa	Predicted RBP	13.11	□□□□□ -0.31
NR1H3-223	ENST00000486991	ATP13A3	Q9H7F0	1226 aa		13.11	□□□□□ -0.31
NR1H3-223	ENST00000486991	GDF3	Q9NR23	364 aa		13.11	□□□□□ -0.31
NR1H3-223	ENST00000486991	GOLGA6A	Q9NYA3	693 aa		13.11	□□□□□ -0.31
NR1H3-223	ENST00000486991	AAR2	Q9Y312	384 aa	Known RBP	13.11	□□□□□ -0.31
NR1H3-223	ENST00000486991	SNX24	Q9Y343	169 aa		13.11	□□□□□ -0.31
NR1H3-223	ENST00000486991	PCDHGC4	Q9Y5F7	938 aa		13.11	□□□□□ -0.31
NR1H3-223	ENST00000486991	RAI2	Q9Y5P3	530 aa		13.11	□□□□□ -0.31
NR1H3-223	ENST00000486991	SETX	Q7Z333	2677 aa	Known RBP	13.11	□□□□□ -0.31
NR1H3-223	ENST00000486991	ASXL3	Q9C0F0	2248 aa		13.11	□□□□□ -0.31
NR1H3-223	ENST00000486991	MYLK	Q15746	1914 aa		13.1	□□□□□ -0.31
NR1H3-223	ENST00000486991	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	13.1	□□□□□ -0.31
NR1H3-223	ENST00000486991	PRAMEF26	H0Y7S4	382 aa		13.1	□□□□□ -0.31
NR1H3-223	ENST00000486991	TLR4	O00206	839 aa		13.1	□□□□□ -0.31
NR1H3-223	ENST00000486991	DNALI1	O14645	258 aa	Predicted RBP	13.1	□□□□□ -0.31
NR1H3-223	ENST00000486991	PSMD3	O43242	534 aa		13.1	□□□□□ -0.31
NR1H3-223	ENST00000486991	UGT2B4	P06133	528 aa		13.1	□□□□□ -0.31
NR1H3-223	ENST00000486991	APRT	P07741	180 aa		13.1	□□□□□ -0.31
NR1H3-223	ENST00000486991	ADRB3	P13945	408 aa		13.1	□□□□□ -0.31
NR1H3-223	ENST00000486991	CA4	P22748	312 aa		13.1	□□□□□ -0.31
NR1H3-223	ENST00000486991	SERPINA4	P29622	427 aa		13.1	□□□□□ -0.31
NR1H3-223	ENST00000486991	ABL2	P42684	1182 aa		13.1	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms