RNA–Protein interactions for RNA: ENST00000486868.1

PRKCB-207, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-207ENST00000486868 ZFYVE1Q9HBF4 777 aa11.62□□□□□ -0.55
PRKCB-207ENST00000486868 IGSF5Q9NSI5 407 aa11.62□□□□□ -0.55
PRKCB-207ENST00000486868 THG1LQ9NWX6 298 aaKnown RBP11.62□□□□□ -0.55
PRKCB-207ENST00000486868 LMCD1Q9NZU5 365 aa11.62□□□□□ -0.55
PRKCB-207ENST00000486868 DKK3Q9UBP4 350 aa11.62□□□□□ -0.55
PRKCB-207ENST00000486868 HAO1Q9UJM8 370 aa11.62□□□□□ -0.55
PRKCB-207ENST00000486868 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.62□□□□□ -0.55
PRKCB-207ENST00000486868 RRP15Q9Y3B9 282 aaKnown RBP11.62□□□□□ -0.55
PRKCB-207ENST00000486868 PCDHB1Q9Y5F3 818 aa11.62□□□□□ -0.55
PRKCB-207ENST00000486868 WNT6Q9Y6F9 365 aa11.62□□□□□ -0.55
PRKCB-207ENST00000486868 NOTCH4Q99466 2003 aa11.62□□□□□ -0.55
PRKCB-207ENST00000486868 HELZP42694 1942 aaKnown RBP11.61□□□□□ -0.55
PRKCB-207ENST00000486868 TRBV5-4A0A0C4DH59 114 aa11.61□□□□□ -0.55
PRKCB-207ENST00000486868 F8W8V4 182 aa11.61□□□□□ -0.55
PRKCB-207ENST00000486868 CSPG5O95196 566 aa11.61□□□□□ -0.55
PRKCB-207ENST00000486868 TOP3BO95985 862 aaKnown RBP11.61□□□□□ -0.55
PRKCB-207ENST00000486868 ESR1P03372 595 aa11.61□□□□□ -0.55
PRKCB-207ENST00000486868 PYGLP06737 847 aa11.61□□□□□ -0.55
PRKCB-207ENST00000486868 PIRTP0C851 137 aa11.61□□□□□ -0.55
PRKCB-207ENST00000486868 ALOX15P16050 662 aaPredicted RBP11.61□□□□□ -0.55
PRKCB-207ENST00000486868 ATP5F1P24539 256 aaPredicted RBP11.61□□□□□ -0.55
PRKCB-207ENST00000486868 MC4RP32245 332 aa11.61□□□□□ -0.55
PRKCB-207ENST00000486868 CTSOP43234 321 aaPredicted RBP11.61□□□□□ -0.55
PRKCB-207ENST00000486868 ABCG1P45844 678 aa11.61□□□□□ -0.55
PRKCB-207ENST00000486868 RECQLP46063 649 aaPredicted RBP11.61□□□□□ -0.55
PRKCB-207ENST00000486868 SLC1A6P48664 564 aa11.61□□□□□ -0.55
PRKCB-207ENST00000486868 DGKGP49619 791 aa11.61□□□□□ -0.55
PRKCB-207ENST00000486868 CCNHP51946 323 aaPredicted RBP11.61□□□□□ -0.55
PRKCB-207ENST00000486868 ARFIP2P53365 341 aa11.61□□□□□ -0.55
PRKCB-207ENST00000486868 ABCE1P61221 599 aaKnown RBP11.61□□□□□ -0.55
PRKCB-207ENST00000486868 IRF9Q00978 393 aa11.61□□□□□ -0.55
PRKCB-207ENST00000486868 PEX6Q13608 980 aa11.61□□□□□ -0.55
PRKCB-207ENST00000486868 E2F5Q15329 346 aa11.61□□□□□ -0.55
PRKCB-207ENST00000486868 SMAD1Q15797 465 aaKnown RBP11.61□□□□□ -0.55
PRKCB-207ENST00000486868 ZNF789Q5FWF6 425 aa11.61□□□□□ -0.55
PRKCB-207ENST00000486868 FAM78AQ5JUQ0 283 aa11.61□□□□□ -0.55
PRKCB-207ENST00000486868 RBM20Q5T481 1227 aaKnown RBP11.61□□□□□ -0.55
PRKCB-207ENST00000486868 ANKRD54Q6NXT1 300 aa11.61□□□□□ -0.55
PRKCB-207ENST00000486868 TMC5Q6UXY8 1006 aa11.61□□□□□ -0.55
PRKCB-207ENST00000486868 USP45Q70EL2 814 aa11.61□□□□□ -0.55
PRKCB-207ENST00000486868 SLC22A9Q8IVM8 553 aa11.61□□□□□ -0.55
PRKCB-207ENST00000486868 WDR75Q8IWA0 830 aaKnown RBP11.61□□□□□ -0.55
PRKCB-207ENST00000486868 FSTL5Q8N475 847 aaPredicted RBP11.61□□□□□ -0.55
PRKCB-207ENST00000486868 RHEBL1Q8TAI7 183 aa11.61□□□□□ -0.55
PRKCB-207ENST00000486868 PIWIL2Q8TC59 973 aaKnown RBP11.61□□□□□ -0.55
PRKCB-207ENST00000486868 FRS2Q8WU20 508 aa11.61□□□□□ -0.55
PRKCB-207ENST00000486868 KCTD4Q8WVF5 259 aa11.61□□□□□ -0.55
PRKCB-207ENST00000486868 FGF13Q92913 245 aa11.61□□□□□ -0.55
PRKCB-207ENST00000486868 NXNL1Q96CM4 212 aa11.61□□□□□ -0.55
PRKCB-207ENST00000486868 MRGPRX3Q96LB0 322 aa11.61□□□□□ -0.55
PRKCB-207ENST00000486868 LRRC3BQ96PB8 259 aa11.61□□□□□ -0.55
PRKCB-207ENST00000486868 OLFM1Q99784 485 aa11.61□□□□□ -0.55
PRKCB-207ENST00000486868 FAM83CQ9BQN1 747 aa11.61□□□□□ -0.55
PRKCB-207ENST00000486868 HEPHQ9BQS7 1158 aa11.61□□□□□ -0.55
PRKCB-207ENST00000486868 CCDC68Q9H2F9 335 aa11.61□□□□□ -0.55
PRKCB-207ENST00000486868 GPAMQ9HCL2 828 aa11.61□□□□□ -0.55
PRKCB-207ENST00000486868 RAD18Q9NS91 495 aa11.61□□□□□ -0.55
PRKCB-207ENST00000486868 ZNF358Q9NW07 568 aa11.61□□□□□ -0.55
PRKCB-207ENST00000486868 POLR3BQ9NW08 1133 aaPredicted RBP11.61□□□□□ -0.55
PRKCB-207ENST00000486868 TAS2R13Q9NYV9 303 aa11.61□□□□□ -0.55
PRKCB-207ENST00000486868 FKBPLQ9UIM3 349 aa11.61□□□□□ -0.55
PRKCB-207ENST00000486868 CDH7Q9ULB5 785 aa11.61□□□□□ -0.55
PRKCB-207ENST00000486868 SLC30A1Q9Y6M5 507 aa11.61□□□□□ -0.55
PRKCB-207ENST00000486868 RGSL1A5PLK6 1076 aa11.6□□□□□ -0.55
PRKCB-207ENST00000486868 OR51F1A6NGY5 319 aa11.6□□□□□ -0.55
PRKCB-207ENST00000486868 AGAP14A8MT82 685 aa11.6□□□□□ -0.55
PRKCB-207ENST00000486868 SLCO1B7G3V0H7 640 aa11.6□□□□□ -0.55
PRKCB-207ENST00000486868 H3BMM5 538 aa11.6□□□□□ -0.55
PRKCB-207ENST00000486868 NPHS1O60500 1241 aa11.6□□□□□ -0.55
PRKCB-207ENST00000486868 HNRNPCL1O60812 293 aaKnown RBP11.6□□□□□ -0.55
PRKCB-207ENST00000486868 FSBPO95073 299 aa11.6□□□□□ -0.55
PRKCB-207ENST00000486868 PIGNO95427 931 aa11.6□□□□□ -0.55
PRKCB-207ENST00000486868 SBK3P0C264 359 aa11.6□□□□□ -0.55
PRKCB-207ENST00000486868 PKMP14618 531 aaKnown RBP11.6□□□□□ -0.55
PRKCB-207ENST00000486868 ZNF30P17039 623 aa11.6□□□□□ -0.55
PRKCB-207ENST00000486868 KCNA4P22459 653 aa11.6□□□□□ -0.55
PRKCB-207ENST00000486868 HNF1BP35680 557 aa11.6□□□□□ -0.55
PRKCB-207ENST00000486868 EIF2DP41214 584 aaKnown RBP11.6□□□□□ -0.55
PRKCB-207ENST00000486868 ATP6V0D1P61421 351 aa11.6□□□□□ -0.55
PRKCB-207ENST00000486868 NFKB2Q00653 900 aa11.6□□□□□ -0.55
PRKCB-207ENST00000486868 PFKPQ01813 784 aa11.6□□□□□ -0.55
PRKCB-207ENST00000486868 FCHO2Q0JRZ9 810 aa11.6□□□□□ -0.55
PRKCB-207ENST00000486868 GALNT1Q10472 559 aaPredicted RBP11.6□□□□□ -0.55
PRKCB-207ENST00000486868 DLG1Q12959 904 aa11.6□□□□□ -0.55
PRKCB-207ENST00000486868 BNIP1Q12981 228 aa11.6□□□□□ -0.55
PRKCB-207ENST00000486868 SEMA3AQ14563 771 aa11.6□□□□□ -0.55
PRKCB-207ENST00000486868 CBX2Q14781 532 aaPredicted RBP11.6□□□□□ -0.55
PRKCB-207ENST00000486868 CRY1Q16526 586 aa11.6□□□□□ -0.55
PRKCB-207ENST00000486868 PREPLQ4J6C6 727 aaPredicted RBP11.6□□□□□ -0.55
PRKCB-207ENST00000486868 TECRLQ5HYJ1 363 aa11.6□□□□□ -0.55
PRKCB-207ENST00000486868 UGT3A1Q6NUS8 523 aa11.6□□□□□ -0.55
PRKCB-207ENST00000486868 ZNF549Q6P9A3 640 aa11.6□□□□□ -0.55
PRKCB-207ENST00000486868 GDPD4Q6W3E5 623 aa11.6□□□□□ -0.55
PRKCB-207ENST00000486868 DPY19L3Q6ZPD9 716 aa11.6□□□□□ -0.55
PRKCB-207ENST00000486868 LYSMD3Q7Z3D4 306 aa11.6□□□□□ -0.55
PRKCB-207ENST00000486868 PIWIL4Q7Z3Z4 852 aaKnown RBP11.6□□□□□ -0.55
PRKCB-207ENST00000486868 SNX20Q7Z614 316 aa11.6□□□□□ -0.55
PRKCB-207ENST00000486868 NKAPQ8N5F7 415 aaKnown RBP11.6□□□□□ -0.55
PRKCB-207ENST00000486868 C12orf76Q8N812 135 aaPredicted RBP11.6□□□□□ -0.55
PRKCB-207ENST00000486868 TTC16Q8NEE8 873 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms