RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 SLC30A6Q6NXT4 461 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 PCSK4Q6UW60 755 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 CHST9Q7L1S5 443 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 KRT74Q7RTS7 529 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 GPRIN1Q7Z2K8 1008 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 SCD5Q86SK9 330 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 ERICH1Q86X53 443 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 AHI1Q8N157 1196 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 ZNF557Q8N988 423 aaPredicted RBP6.92□□□□□ -1.3
HDAC3-209ENST00000486618 C12orf29Q8N999 325 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 FAM181AQ8N9Y4 354 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 CYB5D2Q8WUJ1 264 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 RFFLQ8WZ73 363 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 HPS3Q969F9 1004 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 ZNF669Q96BR6 464 aaPredicted RBP6.92□□□□□ -1.3
HDAC3-209ENST00000486618 TMA16Q96EY4 203 aaKnown RBP6.92□□□□□ -1.3
HDAC3-209ENST00000486618 CYFIP2Q96F07 1278 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 P2RY11Q96G91 374 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 TIGD1Q96MW7 591 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 SLC6A18Q96N87 628 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 PLEKHG4BQ96PX9 1271 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 ORAI3Q9BRQ5 295 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 CRACR2AQ9BSW2 395 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 NT5C1AQ9BXI3 368 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 SDCBP2Q9H190 292 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 ERVMER34-1Q9H9K5 563 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 PLSCR4Q9NRQ2 329 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 FBXL12Q9NXK8 326 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 MARCH2Q9P0N8 246 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.92□□□□□ -1.3
HDAC3-209ENST00000486618 HECAQ9UBI9 543 aaPredicted RBP6.92□□□□□ -1.3
HDAC3-209ENST00000486618 CLEC4EQ9ULY5 219 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 C19orf53Q9UNZ5 99 aaPredicted RBP6.92□□□□□ -1.3
HDAC3-209ENST00000486618 TMED5Q9Y3A6 229 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 UBE4BO95155 1302 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 PTPN13Q12923 2485 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 PLXNA2O75051 1894 aa6.92□□□□□ -1.3
HDAC3-209ENST00000486618 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.91□□□□□ -1.3
HDAC3-209ENST00000486618 SLC12A8A0AV02 714 aa6.91□□□□□ -1.3
HDAC3-209ENST00000486618 TLR4O00206 839 aa6.91□□□□□ -1.3
HDAC3-209ENST00000486618 TGFB1I1O43294 461 aa6.91□□□□□ -1.3
HDAC3-209ENST00000486618 CEP104O60308 925 aa6.91□□□□□ -1.3
HDAC3-209ENST00000486618 MT-CO3P00414 261 aa6.91□□□□□ -1.3
HDAC3-209ENST00000486618 C4BPAP04003 597 aaKnown RBP6.91□□□□□ -1.3
HDAC3-209ENST00000486618 DLDP09622 509 aaKnown RBP6.91□□□□□ -1.3
HDAC3-209ENST00000486618 MYBL2P10244 700 aa6.91□□□□□ -1.3
HDAC3-209ENST00000486618 PABPC1P11940 636 aaKnown RBP6.91□□□□□ -1.3
HDAC3-209ENST00000486618 PDCP20941 246 aa6.91□□□□□ -1.3
HDAC3-209ENST00000486618 ACP1P24666 158 aa6.91□□□□□ -1.3
HDAC3-209ENST00000486618 HLA-FP30511 346 aa6.91□□□□□ -1.3
HDAC3-209ENST00000486618 CCR5P51681 352 aa6.91□□□□□ -1.3
HDAC3-209ENST00000486618 GALCP54803 685 aa6.91□□□□□ -1.3
HDAC3-209ENST00000486618 ST8SIA6P61647 398 aa6.91□□□□□ -1.3
HDAC3-209ENST00000486618 ASIC1P78348 528 aa6.91□□□□□ -1.3
HDAC3-209ENST00000486618 RCN1Q15293 331 aa6.91□□□□□ -1.3
HDAC3-209ENST00000486618 SHBQ15464 509 aa6.91□□□□□ -1.3
HDAC3-209ENST00000486618 LONRF2Q1L5Z9 754 aa6.91□□□□□ -1.3
HDAC3-209ENST00000486618 KRBOX4Q5JUW0 171 aa6.91□□□□□ -1.3
HDAC3-209ENST00000486618 FAM26FQ5R3K3 315 aa6.91□□□□□ -1.3
HDAC3-209ENST00000486618 ARHGAP40Q5TG30 622 aa6.91□□□□□ -1.3
HDAC3-209ENST00000486618 SFMBT2Q5VUG0 894 aa6.91□□□□□ -1.3
HDAC3-209ENST00000486618 MBLAC2Q68D91 279 aa6.91□□□□□ -1.3
HDAC3-209ENST00000486618 LIN54Q6MZP7 749 aa6.91□□□□□ -1.3
HDAC3-209ENST00000486618 NCEH1Q6PIU2 408 aa6.91□□□□□ -1.3
HDAC3-209ENST00000486618 KDM7AQ6ZMT4 941 aa6.91□□□□□ -1.3
HDAC3-209ENST00000486618 B4GALNT4Q76KP1 1039 aa6.91□□□□□ -1.3
HDAC3-209ENST00000486618 DHX40Q8IX18 779 aaKnown RBP6.91□□□□□ -1.3
HDAC3-209ENST00000486618 C12orf56Q8IXR9 622 aa6.91□□□□□ -1.3
HDAC3-209ENST00000486618 FAM217AQ8IXS0 508 aa6.91□□□□□ -1.3
HDAC3-209ENST00000486618 PPM1KQ8N3J5 372 aa6.91□□□□□ -1.3
HDAC3-209ENST00000486618 TRIML2Q8N7C3 387 aa6.91□□□□□ -1.3
HDAC3-209ENST00000486618 ZNF366Q8N895 744 aa6.91□□□□□ -1.3
HDAC3-209ENST00000486618 DCBLD1Q8N8Z6 715 aa6.91□□□□□ -1.3
HDAC3-209ENST00000486618 AVL9Q8NBF6 648 aa6.91□□□□□ -1.3
HDAC3-209ENST00000486618 TOR1AIP2Q8NFQ8 470 aa6.91□□□□□ -1.3
HDAC3-209ENST00000486618 OR2T34Q8NGX1 318 aa6.91□□□□□ -1.3
HDAC3-209ENST00000486618 GIMAP5Q96F15 307 aa6.91□□□□□ -1.3
HDAC3-209ENST00000486618 MED8Q96G25 268 aa6.91□□□□□ -1.3
HDAC3-209ENST00000486618 ZNF845Q96IR2 970 aaPredicted RBP6.91□□□□□ -1.3
HDAC3-209ENST00000486618 TMX3Q96JJ7 454 aa6.91□□□□□ -1.3
HDAC3-209ENST00000486618 LRGUKQ96M69 825 aa6.91□□□□□ -1.3
HDAC3-209ENST00000486618 CLIC6Q96NY7 704 aa6.91□□□□□ -1.3
HDAC3-209ENST00000486618 OMDQ99983 421 aa6.91□□□□□ -1.3
HDAC3-209ENST00000486618 DHRS4Q9BTZ2 278 aa6.91□□□□□ -1.3
HDAC3-209ENST00000486618 DUSP16Q9BY84 665 aa6.91□□□□□ -1.3
HDAC3-209ENST00000486618 PABPC3Q9H361 631 aaKnown RBP6.91□□□□□ -1.3
HDAC3-209ENST00000486618 CUEDC2Q9H467 287 aa6.91□□□□□ -1.3
HDAC3-209ENST00000486618 ANLNQ9NQW6 1124 aa6.91□□□□□ -1.3
HDAC3-209ENST00000486618 OLA1Q9NTK5 396 aaKnown RBP6.91□□□□□ -1.3
HDAC3-209ENST00000486618 GGA2Q9UJY4 613 aa6.91□□□□□ -1.3
HDAC3-209ENST00000486618 FZD4Q9ULV1 537 aa6.91□□□□□ -1.3
HDAC3-209ENST00000486618 CARD8Q9Y2G2 431 aa6.91□□□□□ -1.3
HDAC3-209ENST00000486618 CLIC4Q9Y696 253 aa6.91□□□□□ -1.3
HDAC3-209ENST00000486618 MGAQ8IWI9 3026 aa6.91□□□□□ -1.3
HDAC3-209ENST00000486618 TDRD6O60522 2096 aaKnown RBP6.91□□□□□ -1.3
HDAC3-209ENST00000486618 PIEZO2Q9H5I5 2752 aa6.9□□□□□ -1.3
HDAC3-209ENST00000486618 A0A0G2JPF8 293 aa6.9□□□□□ -1.3
HDAC3-209ENST00000486618 A0A1W2PR77 199 aa6.9□□□□□ -1.3
HDAC3-209ENST00000486618 VPS37CA5D8V6 355 aaPredicted RBP6.9□□□□□ -1.3
HDAC3-209ENST00000486618 LRRIQ3A6PVS8 624 aaPredicted RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms