RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 TRIM23P36406 574 aa17.63■□□□□ 0.41
COL6A1-204ENST00000486023 CDKN2BP42772 138 aa17.63■□□□□ 0.41
COL6A1-204ENST00000486023 GNPDA1P46926 289 aa17.63■□□□□ 0.41
COL6A1-204ENST00000486023 POLD2P49005 469 aa17.63■□□□□ 0.41
COL6A1-204ENST00000486023 MARCKSL1P49006 195 aa17.63■□□□□ 0.41
COL6A1-204ENST00000486023 IFI35P80217 286 aaPredicted RBP17.63■□□□□ 0.41
COL6A1-204ENST00000486023 PTSQ03393 145 aa17.63■□□□□ 0.41
COL6A1-204ENST00000486023 TFDP2Q14188 446 aa17.63■□□□□ 0.41
COL6A1-204ENST00000486023 SPC24Q8NBT2 197 aa17.63■□□□□ 0.41
COL6A1-204ENST00000486023 CCL4L1Q8NHW4 92 aa17.63■□□□□ 0.41
COL6A1-204ENST00000486023 SPOCK2Q92563 424 aa17.63■□□□□ 0.41
COL6A1-204ENST00000486023 FATE1Q969F0 183 aa17.63■□□□□ 0.41
COL6A1-204ENST00000486023 MCCC1Q96RQ3 725 aaPredicted RBP17.63■□□□□ 0.41
COL6A1-204ENST00000486023 HEMGNQ9BXL5 484 aa17.63■□□□□ 0.41
COL6A1-204ENST00000486023 ABCG8Q9H221 673 aa17.63■□□□□ 0.41
COL6A1-204ENST00000486023 TMEM98Q9Y2Y6 226 aa17.63■□□□□ 0.41
COL6A1-204ENST00000486023 PPIL1Q9Y3C6 166 aa17.63■□□□□ 0.41
COL6A1-204ENST00000486023 DUSP10Q9Y6W6 482 aa17.63■□□□□ 0.41
COL6A1-204ENST00000486023 PTPRBP23467 1997 aa17.62■□□□□ 0.41
COL6A1-204ENST00000486023 C1orf232A0A0U1RR37 186 aa17.62■□□□□ 0.41
COL6A1-204ENST00000486023 EME2A4GXA9 379 aaPredicted RBP17.62■□□□□ 0.41
COL6A1-204ENST00000486023 RCCD1A6NED2 376 aa17.62■□□□□ 0.41
COL6A1-204ENST00000486023 ZNF487B1APH4 448 aa17.62■□□□□ 0.41
COL6A1-204ENST00000486023 B4DGG1 531 aa17.62■□□□□ 0.41
COL6A1-204ENST00000486023 F5H423 210 aaPredicted RBP17.62■□□□□ 0.41
COL6A1-204ENST00000486023 PSMD11O00231 422 aa17.62■□□□□ 0.41
COL6A1-204ENST00000486023 PSTPIP1O43586 416 aa17.62■□□□□ 0.41
COL6A1-204ENST00000486023 CSO75390 466 aaKnown RBP17.62■□□□□ 0.41
COL6A1-204ENST00000486023 PRLP01236 227 aa17.62■□□□□ 0.41
COL6A1-204ENST00000486023 SLC4A1P02730 911 aa17.62■□□□□ 0.41
COL6A1-204ENST00000486023 GP1BAP07359 652 aa17.62■□□□□ 0.41
COL6A1-204ENST00000486023 MMP2P08253 660 aa17.62■□□□□ 0.41
COL6A1-204ENST00000486023 MYCLP1P12525 358 aaPredicted RBP17.62■□□□□ 0.41
COL6A1-204ENST00000486023 PECAM1P16284 738 aaPredicted RBP17.62■□□□□ 0.41
COL6A1-204ENST00000486023 SKOR1P84550 965 aa17.62■□□□□ 0.41
COL6A1-204ENST00000486023 CDK3Q00526 305 aa17.62■□□□□ 0.41
COL6A1-204ENST00000486023 MARK2Q7KZI7 788 aaKnown RBP17.62■□□□□ 0.41
COL6A1-204ENST00000486023 TECPR1Q7Z6L1 1165 aa17.62■□□□□ 0.41
COL6A1-204ENST00000486023 TRIM74Q86UV6 250 aa17.62■□□□□ 0.41
COL6A1-204ENST00000486023 NT5DC3Q86UY8 548 aa17.62■□□□□ 0.41
COL6A1-204ENST00000486023 ZC3H18Q86VM9 953 aaKnown RBP17.62■□□□□ 0.41
COL6A1-204ENST00000486023 RCOR2Q8IZ40 523 aa17.62■□□□□ 0.41
COL6A1-204ENST00000486023 CBARPQ8N350 705 aaPredicted RBP17.62■□□□□ 0.41
COL6A1-204ENST00000486023 DCBLD1Q8N8Z6 715 aa17.62■□□□□ 0.41
COL6A1-204ENST00000486023 KYQ8NBH2 561 aa17.62■□□□□ 0.41
COL6A1-204ENST00000486023 ACRBPQ8NEB7 543 aa17.62■□□□□ 0.41
COL6A1-204ENST00000486023 HNRNPLLQ8WVV9 542 aaKnown RBP17.62■□□□□ 0.41
COL6A1-204ENST00000486023 NXPE2Q96DL1 559 aa17.62■□□□□ 0.41
COL6A1-204ENST00000486023 TBATAQ96M53 351 aa17.62■□□□□ 0.41
COL6A1-204ENST00000486023 DEPDC7Q96QD5 511 aa17.62■□□□□ 0.41
COL6A1-204ENST00000486023 AGAP2Q99490 1192 aa17.62■□□□□ 0.41
COL6A1-204ENST00000486023 CCDC3Q9BQI4 270 aa17.62■□□□□ 0.41
COL6A1-204ENST00000486023 MLPHQ9BV36 600 aaPredicted RBP17.62■□□□□ 0.41
COL6A1-204ENST00000486023 DPEP2Q9H4A9 486 aa17.62■□□□□ 0.41
COL6A1-204ENST00000486023 KCTD5Q9NXV2 234 aa17.62■□□□□ 0.41
COL6A1-204ENST00000486023 UBP1Q9NZI7 540 aa17.62■□□□□ 0.41
COL6A1-204ENST00000486023 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.62■□□□□ 0.41
COL6A1-204ENST00000486023 DGKBQ9Y6T7 804 aa17.62■□□□□ 0.41
COL6A1-204ENST00000486023 PRSS38A1L453 326 aa17.61■□□□□ 0.41
COL6A1-204ENST00000486023 INPP4BO15327 924 aa17.61■□□□□ 0.41
COL6A1-204ENST00000486023 USP12O75317 370 aa17.61■□□□□ 0.41
COL6A1-204ENST00000486023 ASMTLO95671 621 aa17.61■□□□□ 0.41
COL6A1-204ENST00000486023 HOXC4P09017 264 aaPredicted RBP17.61■□□□□ 0.41
COL6A1-204ENST00000486023 PIRTP0C851 137 aa17.61■□□□□ 0.41
COL6A1-204ENST00000486023 HADHBP55084 474 aaKnown RBP17.61■□□□□ 0.41
COL6A1-204ENST00000486023 ADCY2Q08462 1091 aa17.61■□□□□ 0.41
COL6A1-204ENST00000486023 QPCTQ16769 361 aa17.61■□□□□ 0.41
COL6A1-204ENST00000486023 CCDC181Q5TID7 509 aa17.61■□□□□ 0.41
COL6A1-204ENST00000486023 ALG1LQ6GMV1 187 aa17.61■□□□□ 0.41
COL6A1-204ENST00000486023 FOXR1Q6PIV2 292 aa17.61■□□□□ 0.41
COL6A1-204ENST00000486023 RAD9BQ6WBX8 426 aa17.61■□□□□ 0.41
COL6A1-204ENST00000486023 BZW1Q7L1Q6 419 aaKnown RBP17.61■□□□□ 0.41
COL6A1-204ENST00000486023 KIAA1328Q86T90 577 aa17.61■□□□□ 0.41
COL6A1-204ENST00000486023 VSIG1Q86XK7 387 aa17.61■□□□□ 0.41
COL6A1-204ENST00000486023 SFTPA2Q8IWL1 248 aa17.61■□□□□ 0.41
COL6A1-204ENST00000486023 ARL10Q8N8L6 244 aa17.61■□□□□ 0.41
COL6A1-204ENST00000486023 Q8N9G6 341 aaPredicted RBP17.61■□□□□ 0.41
COL6A1-204ENST00000486023 SPATA22Q8NHS9 363 aa17.61■□□□□ 0.41
COL6A1-204ENST00000486023 PTCD2Q8WV60 388 aaKnown RBP17.61■□□□□ 0.41
COL6A1-204ENST00000486023 TFB1MQ8WVM0 346 aaKnown RBP17.61■□□□□ 0.41
COL6A1-204ENST00000486023 KRT35Q92764 455 aa17.61■□□□□ 0.41
COL6A1-204ENST00000486023 P3H4Q92791 437 aa17.61■□□□□ 0.41
COL6A1-204ENST00000486023 OLFM3Q96PB7 478 aa17.61■□□□□ 0.41
COL6A1-204ENST00000486023 RIOK2Q9BVS4 552 aaKnown RBP17.61■□□□□ 0.41
COL6A1-204ENST00000486023 TEX101Q9BY14 249 aa17.61■□□□□ 0.41
COL6A1-204ENST00000486023 ADGRE3Q9BY15 652 aa17.61■□□□□ 0.41
COL6A1-204ENST00000486023 SUFUQ9UMX1 484 aa17.61■□□□□ 0.41
COL6A1-204ENST00000486023 GPSM3Q9Y4H4 160 aa17.61■□□□□ 0.41
COL6A1-204ENST00000486023 ANKRD36A6QL64 1941 aa17.6■□□□□ 0.41
COL6A1-204ENST00000486023 A0A0A6YYK5 440 aaPredicted RBP17.6■□□□□ 0.41
COL6A1-204ENST00000486023 CAPN8A6NHC0 703 aa17.6■□□□□ 0.41
COL6A1-204ENST00000486023 ANKRD66B4E2M5 251 aa17.6■□□□□ 0.41
COL6A1-204ENST00000486023 TNFRSF10CO14798 259 aa17.6■□□□□ 0.41
COL6A1-204ENST00000486023 PMPCBO75439 489 aa17.6■□□□□ 0.41
COL6A1-204ENST00000486023 MPOP05164 745 aa17.6■□□□□ 0.41
COL6A1-204ENST00000486023 CEACAM5P06731 702 aa17.6■□□□□ 0.41
COL6A1-204ENST00000486023 ZNF30P17039 623 aa17.6■□□□□ 0.41
COL6A1-204ENST00000486023 NR2C2P49116 596 aa17.6■□□□□ 0.41
COL6A1-204ENST00000486023 TFDP3Q5H9I0 405 aa17.6■□□□□ 0.41
COL6A1-204ENST00000486023 LVRNQ6Q4G3 990 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms