RNA–Protein interactions for RNA: ENST00000485424.1

UBA3-210, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-210ENST00000485424 NUP85Q9BW27 656 aa13.26□□□□□ -0.29
UBA3-210ENST00000485424 GSDMCQ9BYG8 508 aa13.26□□□□□ -0.29
UBA3-210ENST00000485424 FOXP3Q9BZS1 431 aa13.26□□□□□ -0.29
UBA3-210ENST00000485424 TMEM168Q9H0V1 697 aa13.26□□□□□ -0.29
UBA3-210ENST00000485424 THAP2Q9H0W7 228 aa13.26□□□□□ -0.29
UBA3-210ENST00000485424 CARS2Q9HA77 564 aaKnown RBP13.26□□□□□ -0.29
UBA3-210ENST00000485424 ATXN7L1Q9ULK2 861 aaPredicted RBP13.26□□□□□ -0.29
UBA3-210ENST00000485424 BOLA1Q9Y3E2 137 aa13.26□□□□□ -0.29
UBA3-210ENST00000485424 A0A1W2PQM1 296 aa13.25□□□□□ -0.29
UBA3-210ENST00000485424 PLD2O14939 933 aa13.25□□□□□ -0.29
UBA3-210ENST00000485424 HGFP14210 728 aa13.25□□□□□ -0.29
UBA3-210ENST00000485424 IL1R2P27930 398 aa13.25□□□□□ -0.29
UBA3-210ENST00000485424 SLC5A2P31639 672 aa13.25□□□□□ -0.29
UBA3-210ENST00000485424 UGT1A5P35504 534 aa13.25□□□□□ -0.29
UBA3-210ENST00000485424 GJC1P36383 396 aa13.25□□□□□ -0.29
UBA3-210ENST00000485424 PPM1FP49593 454 aaPredicted RBP13.25□□□□□ -0.29
UBA3-210ENST00000485424 MAXP61244 160 aa13.25□□□□□ -0.29
UBA3-210ENST00000485424 FANCCQ00597 558 aa13.25□□□□□ -0.29
UBA3-210ENST00000485424 ILF3Q12906 894 aaKnown RBP eCLIP13.25□□□□□ -0.29
UBA3-210ENST00000485424 MAP9Q49MG5 647 aa13.25□□□□□ -0.29
UBA3-210ENST00000485424 C14orf28Q4W4Y0 310 aa13.25□□□□□ -0.29
UBA3-210ENST00000485424 KCTD16Q68DU8 428 aa13.25□□□□□ -0.29
UBA3-210ENST00000485424 SPECC1LQ69YQ0 1117 aa13.25□□□□□ -0.29
UBA3-210ENST00000485424 TIGD7Q6NT04 549 aaPredicted RBP13.25□□□□□ -0.29
UBA3-210ENST00000485424 HEATR4Q86WZ0 1026 aa13.25□□□□□ -0.29
UBA3-210ENST00000485424 GPR156Q8NFN8 814 aa13.25□□□□□ -0.29
UBA3-210ENST00000485424 CCNL2Q96S94 520 aaPredicted RBP13.25□□□□□ -0.29
UBA3-210ENST00000485424 MGME1Q9BQP7 344 aa13.25□□□□□ -0.29
UBA3-210ENST00000485424 PCDH18Q9HCL0 1135 aa13.25□□□□□ -0.29
UBA3-210ENST00000485424 FGF22Q9HCT0 170 aa13.25□□□□□ -0.29
UBA3-210ENST00000485424 NT5MQ9NPB1 228 aa13.25□□□□□ -0.29
UBA3-210ENST00000485424 AKAP7Q9P0M2 348 aaPredicted RBP13.25□□□□□ -0.29
UBA3-210ENST00000485424 LRIT1Q9P2V4 623 aa13.25□□□□□ -0.29
UBA3-210ENST00000485424 TTLL3Q9Y4R7 772 aa13.25□□□□□ -0.29
UBA3-210ENST00000485424 PCDHGA7Q9Y5G6 932 aa13.25□□□□□ -0.29
UBA3-210ENST00000485424 NBASA2RRP1 2371 aa13.24□□□□□ -0.29
UBA3-210ENST00000485424 A0A1W2PQJ5 194 aa13.24□□□□□ -0.29
UBA3-210ENST00000485424 RHPN2P1A8MT19 583 aa13.24□□□□□ -0.29
UBA3-210ENST00000485424 PSMD11O00231 422 aa13.24□□□□□ -0.29
UBA3-210ENST00000485424 HTRA2O43464 458 aaPredicted RBP13.24□□□□□ -0.29
UBA3-210ENST00000485424 MAFKO60675 156 aa13.24□□□□□ -0.29
UBA3-210ENST00000485424 HEXIM1O94992 359 aaKnown RBP13.24□□□□□ -0.29
UBA3-210ENST00000485424 PNLIPP16233 465 aa13.24□□□□□ -0.29
UBA3-210ENST00000485424 CA4P22748 312 aa13.24□□□□□ -0.29
UBA3-210ENST00000485424 CCKBRP32239 447 aa13.24□□□□□ -0.29
UBA3-210ENST00000485424 TRIM23P36406 574 aa13.24□□□□□ -0.29
UBA3-210ENST00000485424 GPR1P46091 355 aa13.24□□□□□ -0.29
UBA3-210ENST00000485424 GNPDA1P46926 289 aa13.24□□□□□ -0.29
UBA3-210ENST00000485424 CNGA3Q16281 694 aa13.24□□□□□ -0.29
UBA3-210ENST00000485424 LRRC49Q8IUZ0 686 aa13.24□□□□□ -0.29
UBA3-210ENST00000485424 NIPA2Q8N8Q9 360 aa13.24□□□□□ -0.29
UBA3-210ENST00000485424 ZDHHC1Q8WTX9 485 aa13.24□□□□□ -0.29
UBA3-210ENST00000485424 SYN2Q92777 582 aaPredicted RBP13.24□□□□□ -0.29
UBA3-210ENST00000485424 TMEM159Q96B96 161 aa13.24□□□□□ -0.29
UBA3-210ENST00000485424 BTBD6Q96KE9 485 aa13.24□□□□□ -0.29
UBA3-210ENST00000485424 COQ10AQ96MF6 247 aa13.24□□□□□ -0.29
UBA3-210ENST00000485424 CMKLR1Q99788 373 aa13.24□□□□□ -0.29
UBA3-210ENST00000485424 LGR4Q9BXB1 951 aa13.24□□□□□ -0.29
UBA3-210ENST00000485424 ZMYND15Q9H091 742 aa13.24□□□□□ -0.29
UBA3-210ENST00000485424 NOD2Q9HC29 1040 aa13.24□□□□□ -0.29
UBA3-210ENST00000485424 ETNK2Q9NVF9 386 aa13.24□□□□□ -0.29
UBA3-210ENST00000485424 RCOR3Q9P2K3 495 aaPredicted RBP13.24□□□□□ -0.29
UBA3-210ENST00000485424 PISDQ9UG56 409 aa13.24□□□□□ -0.29
UBA3-210ENST00000485424 APPL1Q9UKG1 709 aa13.24□□□□□ -0.29
UBA3-210ENST00000485424 ACSL6Q9UKU0 697 aa13.24□□□□□ -0.29
UBA3-210ENST00000485424 LUC7L2Q9Y383 392 aaKnown RBP13.24□□□□□ -0.29
UBA3-210ENST00000485424 SYCE3A1L190 88 aa13.23□□□□□ -0.29
UBA3-210ENST00000485424 AGRPO00253 132 aa13.23□□□□□ -0.29
UBA3-210ENST00000485424 EFSO43281 561 aa13.23□□□□□ -0.29
UBA3-210ENST00000485424 NUDT21O43809 227 aaKnown RBP13.23□□□□□ -0.29
UBA3-210ENST00000485424 SLC28A2O43868 658 aa13.23□□□□□ -0.29
UBA3-210ENST00000485424 NOBOXO60393 691 aa13.23□□□□□ -0.29
UBA3-210ENST00000485424 TPM3P06753 285 aa13.23□□□□□ -0.29
UBA3-210ENST00000485424 CCNB1P14635 433 aa13.23□□□□□ -0.29
UBA3-210ENST00000485424 TCF4P15884 667 aa13.23□□□□□ -0.29
UBA3-210ENST00000485424 CTPS1P17812 591 aa13.23□□□□□ -0.29
UBA3-210ENST00000485424 CR2P20023 1033 aa13.23□□□□□ -0.29
UBA3-210ENST00000485424 ETV3P41162 512 aa13.23□□□□□ -0.29
UBA3-210ENST00000485424 ZBED6P86452 979 aa13.23□□□□□ -0.29
UBA3-210ENST00000485424 CDK3Q00526 305 aa13.23□□□□□ -0.29
UBA3-210ENST00000485424 TRAF2Q12933 501 aa13.23□□□□□ -0.29
UBA3-210ENST00000485424 SRSF6Q13247 344 aaKnown RBP13.23□□□□□ -0.29
UBA3-210ENST00000485424 IQCB1Q15051 598 aa13.23□□□□□ -0.29
UBA3-210ENST00000485424 TGIF1Q15583 401 aa13.23□□□□□ -0.29
UBA3-210ENST00000485424 CERCAMQ5T4B2 595 aa13.23□□□□□ -0.29
UBA3-210ENST00000485424 PHF19Q5T6S3 580 aa13.23□□□□□ -0.29
UBA3-210ENST00000485424 DOK6Q6PKX4 331 aa13.23□□□□□ -0.29
UBA3-210ENST00000485424 LUZP1Q86V48 1076 aa13.23□□□□□ -0.29
UBA3-210ENST00000485424 PIM3Q86V86 326 aa13.23□□□□□ -0.29
UBA3-210ENST00000485424 MAP7D3Q8IWC1 876 aa13.23□□□□□ -0.29
UBA3-210ENST00000485424 PGBD5Q8N414 524 aa13.23□□□□□ -0.29
UBA3-210ENST00000485424 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.23□□□□□ -0.29
UBA3-210ENST00000485424 KCTD6Q8NC69 237 aa13.23□□□□□ -0.29
UBA3-210ENST00000485424 CCL4L1Q8NHW4 92 aa13.23□□□□□ -0.29
UBA3-210ENST00000485424 ZNF564Q8TBZ8 553 aaPredicted RBP13.23□□□□□ -0.29
UBA3-210ENST00000485424 DTD2Q96FN9 168 aa13.23□□□□□ -0.29
UBA3-210ENST00000485424 SEMA3CQ99985 751 aa13.23□□□□□ -0.29
UBA3-210ENST00000485424 POLR1EQ9GZS1 481 aaKnown RBP13.23□□□□□ -0.29
UBA3-210ENST00000485424 CBX8Q9HC52 389 aa13.23□□□□□ -0.29
UBA3-210ENST00000485424 SEPT10Q9P0V9 454 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms