RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 MAZP56270 477 aaKnown RBP13.01□□□□□ -0.33
HDAC6-227ENST00000485102 DPTQ07507 201 aa13.01□□□□□ -0.33
HDAC6-227ENST00000485102 MAMLD1Q13495 774 aa13.01□□□□□ -0.33
HDAC6-227ENST00000485102 CLCA4Q14CN2 919 aa13.01□□□□□ -0.33
HDAC6-227ENST00000485102 ACOX1Q15067 660 aa13.01□□□□□ -0.33
HDAC6-227ENST00000485102 RALGPS1Q5JS13 557 aa13.01□□□□□ -0.33
HDAC6-227ENST00000485102 PLEKHA7Q6IQ23 1121 aa13.01□□□□□ -0.33
HDAC6-227ENST00000485102 RFX8Q6ZV50 586 aa13.01□□□□□ -0.33
HDAC6-227ENST00000485102 NLRP8Q86W28 1048 aa13.01□□□□□ -0.33
HDAC6-227ENST00000485102 NAGSQ8N159 534 aa13.01□□□□□ -0.33
HDAC6-227ENST00000485102 ARFGAP1Q8N6T3 406 aa13.01□□□□□ -0.33
HDAC6-227ENST00000485102 AGBL5Q8NDL9 886 aa13.01□□□□□ -0.33
HDAC6-227ENST00000485102 NEK11Q8NG66 645 aa13.01□□□□□ -0.33
HDAC6-227ENST00000485102 FNIP1Q8TF40 1166 aa13.01□□□□□ -0.33
HDAC6-227ENST00000485102 ERGIC2Q96RQ1 377 aa13.01□□□□□ -0.33
HDAC6-227ENST00000485102 NUDT22Q9BRQ3 303 aa13.01□□□□□ -0.33
HDAC6-227ENST00000485102 ASPSCR1Q9BZE9 553 aa13.01□□□□□ -0.33
HDAC6-227ENST00000485102 TRIM4Q9C037 500 aa13.01□□□□□ -0.33
HDAC6-227ENST00000485102 DHX35Q9H5Z1 703 aaKnown RBP13.01□□□□□ -0.33
HDAC6-227ENST00000485102 SP110Q9HB58 689 aa13.01□□□□□ -0.33
HDAC6-227ENST00000485102 PPIL1Q9Y3C6 166 aa13.01□□□□□ -0.33
HDAC6-227ENST00000485102 ST14Q9Y5Y6 855 aa13.01□□□□□ -0.33
HDAC6-227ENST00000485102 B4E171 279 aa13□□□□□ -0.33
HDAC6-227ENST00000485102 TEX33O43247 280 aa13□□□□□ -0.33
HDAC6-227ENST00000485102 HEXIM1O94992 359 aaKnown RBP13□□□□□ -0.33
HDAC6-227ENST00000485102 CCDC172P0C7W6 258 aa13□□□□□ -0.33
HDAC6-227ENST00000485102 VIPR1P32241 457 aa13□□□□□ -0.33
HDAC6-227ENST00000485102 UGT1A3P35503 534 aa13□□□□□ -0.33
HDAC6-227ENST00000485102 TSPAN7P41732 249 aa13□□□□□ -0.33
HDAC6-227ENST00000485102 CYP4F2P78329 520 aa13□□□□□ -0.33
HDAC6-227ENST00000485102 GPLD1P80108 840 aa13□□□□□ -0.33
HDAC6-227ENST00000485102 CDK3Q00526 305 aa13□□□□□ -0.33
HDAC6-227ENST00000485102 NFKB2Q00653 900 aa13□□□□□ -0.33
HDAC6-227ENST00000485102 LBRQ14739 615 aaKnown RBP13□□□□□ -0.33
HDAC6-227ENST00000485102 CNGA3Q16281 694 aa13□□□□□ -0.33
HDAC6-227ENST00000485102 CA9Q16790 459 aa13□□□□□ -0.33
HDAC6-227ENST00000485102 AMZ1Q400G9 498 aa13□□□□□ -0.33
HDAC6-227ENST00000485102 COLEC12Q5KU26 742 aa13□□□□□ -0.33
HDAC6-227ENST00000485102 BORAQ6PGQ7 559 aa13□□□□□ -0.33
HDAC6-227ENST00000485102 HEATR4Q86WZ0 1026 aa13□□□□□ -0.33
HDAC6-227ENST00000485102 NPWQ8N729 165 aa13□□□□□ -0.33
HDAC6-227ENST00000485102 CCDC112Q8NEF3 446 aa13□□□□□ -0.33
HDAC6-227ENST00000485102 NUS1Q96E22 293 aa13□□□□□ -0.33
HDAC6-227ENST00000485102 DTD2Q96FN9 168 aa13□□□□□ -0.33
HDAC6-227ENST00000485102 SCRN2Q96FV2 425 aa13□□□□□ -0.33
HDAC6-227ENST00000485102 CCDC74BQ96LY2 380 aa13□□□□□ -0.33
HDAC6-227ENST00000485102 CATSPER2Q96P56 530 aa13□□□□□ -0.33
HDAC6-227ENST00000485102 MCCC1Q96RQ3 725 aaPredicted RBP13□□□□□ -0.33
HDAC6-227ENST00000485102 SYT11Q9BT88 431 aa13□□□□□ -0.33
HDAC6-227ENST00000485102 SPRY4Q9C004 299 aa13□□□□□ -0.33
HDAC6-227ENST00000485102 PARVAQ9NVD7 372 aa13□□□□□ -0.33
HDAC6-227ENST00000485102 GPATCH2LQ9NWQ4 482 aa13□□□□□ -0.33
HDAC6-227ENST00000485102 LIMA1Q9UHB6 759 aaKnown RBP13□□□□□ -0.33
HDAC6-227ENST00000485102 MOSPD1Q9UJG1 213 aa13□□□□□ -0.33
HDAC6-227ENST00000485102 PHTF1Q9UMS5 762 aa13□□□□□ -0.33
HDAC6-227ENST00000485102 ZFC3H1O60293 1989 aaKnown RBP13□□□□□ -0.33
HDAC6-227ENST00000485102 IGHV1OR21-1A0A087WYE8 117 aa12.99□□□□□ -0.33
HDAC6-227ENST00000485102 LGALS16A8MUM7 142 aa12.99□□□□□ -0.33
HDAC6-227ENST00000485102 PPM1DO15297 605 aa12.99□□□□□ -0.33
HDAC6-227ENST00000485102 DAPK3O43293 454 aa12.99□□□□□ -0.33
HDAC6-227ENST00000485102 PEX11BO96011 259 aa12.99□□□□□ -0.33
HDAC6-227ENST00000485102 TPM3P06753 285 aa12.99□□□□□ -0.33
HDAC6-227ENST00000485102 THRAP10827 490 aa12.99□□□□□ -0.33
HDAC6-227ENST00000485102 CYP2A6P11509 494 aaPredicted RBP12.99□□□□□ -0.33
HDAC6-227ENST00000485102 ATP1A3P13637 1013 aa12.99□□□□□ -0.33
HDAC6-227ENST00000485102 CDK11BP21127 795 aaKnown RBP12.99□□□□□ -0.33
HDAC6-227ENST00000485102 FASLGP48023 281 aa12.99□□□□□ -0.33
HDAC6-227ENST00000485102 COPB1P53618 953 aaKnown RBP12.99□□□□□ -0.33
HDAC6-227ENST00000485102 RAB15P59190 212 aa12.99□□□□□ -0.33
HDAC6-227ENST00000485102 CTBSQ01459 385 aa12.99□□□□□ -0.33
HDAC6-227ENST00000485102 TLE1Q04724 770 aa12.99□□□□□ -0.33
HDAC6-227ENST00000485102 SLC10A7Q0GE19 358 aa12.99□□□□□ -0.33
HDAC6-227ENST00000485102 ANO6Q4KMQ2 910 aa12.99□□□□□ -0.33
HDAC6-227ENST00000485102 TMEM71Q6P5X7 295 aa12.99□□□□□ -0.33
HDAC6-227ENST00000485102 ARHGAP36Q6ZRI8 547 aa12.99□□□□□ -0.33
HDAC6-227ENST00000485102 CYP4V2Q6ZWL3 525 aaPredicted RBP12.99□□□□□ -0.33
HDAC6-227ENST00000485102 IRF2BP2Q7Z5L9 587 aa12.99□□□□□ -0.33
HDAC6-227ENST00000485102 RAVER1Q8IY67 606 aaKnown RBP12.99□□□□□ -0.33
HDAC6-227ENST00000485102 RCBTB1Q8NDN9 531 aa12.99□□□□□ -0.33
HDAC6-227ENST00000485102 ZNF564Q8TBZ8 553 aaPredicted RBP12.99□□□□□ -0.33
HDAC6-227ENST00000485102 TEFMQ96QE5 360 aaKnown RBP12.99□□□□□ -0.33
HDAC6-227ENST00000485102 NUDCD1Q96RS6 583 aa12.99□□□□□ -0.33
HDAC6-227ENST00000485102 KCTD15Q96SI1 283 aaPredicted RBP12.99□□□□□ -0.33
HDAC6-227ENST00000485102 SNRNP25Q9BV90 132 aaKnown RBP12.99□□□□□ -0.33
HDAC6-227ENST00000485102 TSPY26PQ9H489 355 aa12.99□□□□□ -0.33
HDAC6-227ENST00000485102 SUFUQ9UMX1 484 aa12.99□□□□□ -0.33
HDAC6-227ENST00000485102 B3GALT1Q9Y5Z6 326 aa12.99□□□□□ -0.33
HDAC6-227ENST00000485102 RP1L1Q8IWN7 2480 aaPredicted RBP12.98□□□□□ -0.33
HDAC6-227ENST00000485102 TMEM191CA6NGB0 347 aa12.98□□□□□ -0.33
HDAC6-227ENST00000485102 A8MX80 341 aa12.98□□□□□ -0.33
HDAC6-227ENST00000485102 DFFAO00273 331 aa12.98□□□□□ -0.33
HDAC6-227ENST00000485102 RNF8O76064 485 aa12.98□□□□□ -0.33
HDAC6-227ENST00000485102 FERP16591 822 aa12.98□□□□□ -0.33
HDAC6-227ENST00000485102 PSMA2P25787 234 aa12.98□□□□□ -0.33
HDAC6-227ENST00000485102 AK4P27144 223 aaPredicted RBP12.98□□□□□ -0.33
HDAC6-227ENST00000485102 CSTF2P33240 577 aaKnown RBP eCLIP12.98□□□□□ -0.33
HDAC6-227ENST00000485102 ADCY8P40145 1251 aa12.98□□□□□ -0.33
HDAC6-227ENST00000485102 DPYSQ14117 519 aa12.98□□□□□ -0.33
HDAC6-227ENST00000485102 FILIP1LQ4L180 1135 aa12.98□□□□□ -0.33
HDAC6-227ENST00000485102 TECPR1Q7Z6L1 1165 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms