RNA–Protein interactions for RNA: ENST00000484388.1

ABCA4-206, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 2

Gene ABCA4, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-206ENST00000484388 GPC4O75487 556 aa2.25□□□□□ -2.05
ABCA4-206ENST00000484388 TPPPO94811 219 aa2.25□□□□□ -2.05
ABCA4-206ENST00000484388 SOX30O94993 753 aa2.25□□□□□ -2.05
ABCA4-206ENST00000484388 NDUFB8O95169 186 aa2.25□□□□□ -2.05
ABCA4-206ENST00000484388 TUBBP07437 444 aa2.25□□□□□ -2.05
ABCA4-206ENST00000484388 PRF1P14222 555 aa2.25□□□□□ -2.05
ABCA4-206ENST00000484388 RRM1P23921 792 aa2.25□□□□□ -2.05
ABCA4-206ENST00000484388 PRCPP42785 496 aa2.25□□□□□ -2.05
ABCA4-206ENST00000484388 ME1P48163 572 aa2.25□□□□□ -2.05
ABCA4-206ENST00000484388 NRIP1P48552 1158 aa2.25□□□□□ -2.05
ABCA4-206ENST00000484388 LMAN1P49257 510 aa2.25□□□□□ -2.05
ABCA4-206ENST00000484388 METAP2P50579 478 aaKnown RBP eCLIP2.25□□□□□ -2.05
ABCA4-206ENST00000484388 HMGA2P52926 109 aa2.25□□□□□ -2.05
ABCA4-206ENST00000484388 PNLIPRP2P54317 469 aa2.25□□□□□ -2.05
ABCA4-206ENST00000484388 RRP1P56182 461 aaKnown RBP2.25□□□□□ -2.05
ABCA4-206ENST00000484388 P2RX3P56373 397 aa2.25□□□□□ -2.05
ABCA4-206ENST00000484388 PSMC6P62333 389 aa2.25□□□□□ -2.05
ABCA4-206ENST00000484388 SRSF4Q08170 494 aaKnown RBP2.25□□□□□ -2.05
ABCA4-206ENST00000484388 LRMPQ12912 555 aa2.25□□□□□ -2.05
ABCA4-206ENST00000484388 TNFAIP1Q13829 316 aa2.25□□□□□ -2.05
ABCA4-206ENST00000484388 RASA2Q15283 850 aa2.25□□□□□ -2.05
ABCA4-206ENST00000484388 RBMS2Q15434 407 aaKnown RBP2.25□□□□□ -2.05
ABCA4-206ENST00000484388 TWIST1Q15672 202 aa2.25□□□□□ -2.05
ABCA4-206ENST00000484388 EZH2Q15910 746 aaKnown RBP2.25□□□□□ -2.05
ABCA4-206ENST00000484388 PPP6R3Q5H9R7 873 aaPredicted RBP2.25□□□□□ -2.05
ABCA4-206ENST00000484388 LRIF1Q5T3J3 769 aa2.25□□□□□ -2.05
ABCA4-206ENST00000484388 GGNBP1Q5YKI7 109 aa2.25□□□□□ -2.05
ABCA4-206ENST00000484388 ZNF626Q68DY1 528 aa2.25□□□□□ -2.05
ABCA4-206ENST00000484388 SYCE2Q6PIF2 218 aa2.25□□□□□ -2.05
ABCA4-206ENST00000484388 SHC4Q6S5L8 630 aa2.25□□□□□ -2.05
ABCA4-206ENST00000484388 DPPA4Q7L190 304 aa2.25□□□□□ -2.05
ABCA4-206ENST00000484388 CACNA2D4Q7Z3S7 1137 aa2.25□□□□□ -2.05
ABCA4-206ENST00000484388 MRPL10Q7Z7H8 261 aaKnown RBP2.25□□□□□ -2.05
ABCA4-206ENST00000484388 DNAAF5Q86Y56 855 aa2.25□□□□□ -2.05
ABCA4-206ENST00000484388 PALB2Q86YC2 1186 aa2.25□□□□□ -2.05
ABCA4-206ENST00000484388 SPATA6LQ8N4H0 392 aa2.25□□□□□ -2.05
ABCA4-206ENST00000484388 SYT2Q8N9I0 419 aaPredicted RBP2.25□□□□□ -2.05
ABCA4-206ENST00000484388 IL17RCQ8NAC3 791 aa2.25□□□□□ -2.05
ABCA4-206ENST00000484388 AVL9Q8NBF6 648 aa2.25□□□□□ -2.05
ABCA4-206ENST00000484388 OR14L1PQ8NHC6 308 aa2.25□□□□□ -2.05
ABCA4-206ENST00000484388 GPT2Q8TD30 523 aa2.25□□□□□ -2.05
ABCA4-206ENST00000484388 NTN5Q8WTR8 489 aaPredicted RBP2.25□□□□□ -2.05
ABCA4-206ENST00000484388 TRIB2Q92519 343 aa2.25□□□□□ -2.05
ABCA4-206ENST00000484388 LPAR1Q92633 364 aa2.25□□□□□ -2.05
ABCA4-206ENST00000484388 ZKSCAN4Q969J2 545 aaPredicted RBP2.25□□□□□ -2.05
ABCA4-206ENST00000484388 MOAP1Q96BY2 351 aa2.25□□□□□ -2.05
ABCA4-206ENST00000484388 ACOX2Q99424 681 aa2.25□□□□□ -2.05
ABCA4-206ENST00000484388 BAG1Q99933 345 aaPredicted RBP2.25□□□□□ -2.05
ABCA4-206ENST00000484388 SRSF8Q9BRL6 282 aaKnown RBP2.25□□□□□ -2.05
ABCA4-206ENST00000484388 POLDIP3Q9BY77 421 aaKnown RBP2.25□□□□□ -2.05
ABCA4-206ENST00000484388 KRTAP4-9Q9BYQ8 210 aa2.25□□□□□ -2.05
ABCA4-206ENST00000484388 ISCUQ9H1K1 167 aa2.25□□□□□ -2.05
ABCA4-206ENST00000484388 HRH4Q9H3N8 390 aa2.25□□□□□ -2.05
ABCA4-206ENST00000484388 OSGEPL1Q9H4B0 414 aa2.25□□□□□ -2.05
ABCA4-206ENST00000484388 CATSPERBQ9H7T0 1116 aa2.25□□□□□ -2.05
ABCA4-206ENST00000484388 CLK4Q9HAZ1 481 aaKnown RBP2.25□□□□□ -2.05
ABCA4-206ENST00000484388 HINT3Q9NQE9 182 aaKnown RBP2.25□□□□□ -2.05
ABCA4-206ENST00000484388 SLC35C2Q9NQQ7 365 aa2.25□□□□□ -2.05
ABCA4-206ENST00000484388 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.25□□□□□ -2.05
ABCA4-206ENST00000484388 MTMR10Q9NXD2 777 aa2.25□□□□□ -2.05
ABCA4-206ENST00000484388 PSD3Q9NYI0 1048 aa2.25□□□□□ -2.05
ABCA4-206ENST00000484388 CWC15Q9P013 229 aaKnown RBP2.25□□□□□ -2.05
ABCA4-206ENST00000484388 COPG2Q9UBF2 871 aa2.25□□□□□ -2.05
ABCA4-206ENST00000484388 CFDP1Q9UEE9 299 aaPredicted RBP2.25□□□□□ -2.05
ABCA4-206ENST00000484388 FBXW11Q9UKB1 542 aa2.25□□□□□ -2.05
ABCA4-206ENST00000484388 FRMD4BQ9Y2L6 1034 aa2.25□□□□□ -2.05
ABCA4-206ENST00000484388 LY6G6EA0A0G2JKS1 128 aa2.24□□□□□ -2.05
ABCA4-206ENST00000484388 IGLV5-39A0A0G2JS06 123 aa2.24□□□□□ -2.05
ABCA4-206ENST00000484388 TMEM272A0A1B0GTI8 110 aa2.24□□□□□ -2.05
ABCA4-206ENST00000484388 A0A1B0GVM2 712 aa2.24□□□□□ -2.05
ABCA4-206ENST00000484388 A0A1W2PR77 199 aa2.24□□□□□ -2.05
ABCA4-206ENST00000484388 LRRC72A6NJI9 287 aa2.24□□□□□ -2.05
ABCA4-206ENST00000484388 H7C0S8 307 aa2.24□□□□□ -2.05
ABCA4-206ENST00000484388 VCYO14598 125 aa2.24□□□□□ -2.05
ABCA4-206ENST00000484388 ADAMDEC1O15204 470 aa2.24□□□□□ -2.05
ABCA4-206ENST00000484388 OGG1O15527 345 aa2.24□□□□□ -2.05
ABCA4-206ENST00000484388 TPOP07202 933 aa2.24□□□□□ -2.05
ABCA4-206ENST00000484388 CYC1P08574 325 aa2.24□□□□□ -2.05
ABCA4-206ENST00000484388 TMEM191BP0C7N4 346 aa2.24□□□□□ -2.05
ABCA4-206ENST00000484388 CYP19A1P11511 503 aaPredicted RBP2.24□□□□□ -2.05
ABCA4-206ENST00000484388 NAGAP17050 411 aa2.24□□□□□ -2.05
ABCA4-206ENST00000484388 TRIM21P19474 475 aaKnown RBP2.24□□□□□ -2.05
ABCA4-206ENST00000484388 TNFRSF1BP20333 461 aa2.24□□□□□ -2.05
ABCA4-206ENST00000484388 FBLP22087 321 aaKnown RBP2.24□□□□□ -2.05
ABCA4-206ENST00000484388 UBA1P22314 1058 aaKnown RBP2.24□□□□□ -2.05
ABCA4-206ENST00000484388 HNRNPH1P31943 449 aaKnown RBP2.24□□□□□ -2.05
ABCA4-206ENST00000484388 THPOP40225 353 aa2.24□□□□□ -2.05
ABCA4-206ENST00000484388 MMP13P45452 471 aa2.24□□□□□ -2.05
ABCA4-206ENST00000484388 FASLGP48023 281 aa2.24□□□□□ -2.05
ABCA4-206ENST00000484388 COMPP49747 757 aaPredicted RBP2.24□□□□□ -2.05
ABCA4-206ENST00000484388 GPR143P51810 404 aa2.24□□□□□ -2.05
ABCA4-206ENST00000484388 STAT2P52630 851 aa2.24□□□□□ -2.05
ABCA4-206ENST00000484388 POU5F1Q01860 360 aaKnown RBP2.24□□□□□ -2.05
ABCA4-206ENST00000484388 CXCL9Q07325 125 aa2.24□□□□□ -2.05
ABCA4-206ENST00000484388 GRIK2Q13002 908 aa2.24□□□□□ -2.05
ABCA4-206ENST00000484388 CDC16Q13042 620 aa2.24□□□□□ -2.05
ABCA4-206ENST00000484388 PTGR1Q14914 329 aa2.24□□□□□ -2.05
ABCA4-206ENST00000484388 SRSF7Q16629 238 aaKnown RBP eCLIP2.24□□□□□ -2.05
ABCA4-206ENST00000484388 SMN1Q16637 294 aaKnown RBP2.24□□□□□ -2.05
ABCA4-206ENST00000484388 KYNUQ16719 465 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms