RNA–Protein interactions for RNA: ENST00000484098.5

STRADB-208, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 3

Gene STRADB, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-208ENST00000484098 ARHGEF38Q9NXL2 777 aa2.84□□□□□ -1.95
STRADB-208ENST00000484098 PSD3Q9NYI0 1048 aa2.84□□□□□ -1.95
STRADB-208ENST00000484098 OGFRQ9NZT2 677 aa2.84□□□□□ -1.95
STRADB-208ENST00000484098 TUBE1Q9UJT0 475 aa2.84□□□□□ -1.95
STRADB-208ENST00000484098 VPS4AQ9UN37 437 aa2.84□□□□□ -1.95
STRADB-208ENST00000484098 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.84□□□□□ -1.95
STRADB-208ENST00000484098 NOTCH2Q04721 2471 aa2.83□□□□□ -1.96
STRADB-208ENST00000484098 TRAV34A0A0B4J273 112 aa2.83□□□□□ -1.96
STRADB-208ENST00000484098 IGLV5-39A0A0G2JS06 123 aa2.83□□□□□ -1.96
STRADB-208ENST00000484098 OR6C68A6NDL8 312 aa2.83□□□□□ -1.96
STRADB-208ENST00000484098 TMEM247A6NEH6 219 aa2.83□□□□□ -1.96
STRADB-208ENST00000484098 URADA6NGE7 173 aa2.83□□□□□ -1.96
STRADB-208ENST00000484098 LRRC72A6NJI9 287 aa2.83□□□□□ -1.96
STRADB-208ENST00000484098 A6NL46 340 aa2.83□□□□□ -1.96
STRADB-208ENST00000484098 H0YAE9 185 aa2.83□□□□□ -1.96
STRADB-208ENST00000484098 DDX39AO00148 427 aaKnown RBP2.83□□□□□ -1.96
STRADB-208ENST00000484098 CES2O00748 559 aa2.83□□□□□ -1.96
STRADB-208ENST00000484098 CPLX1O14810 134 aa2.83□□□□□ -1.96
STRADB-208ENST00000484098 IPO8O15397 1037 aaKnown RBP2.83□□□□□ -1.96
STRADB-208ENST00000484098 PRPF4O43172 522 aaKnown RBP eCLIP2.83□□□□□ -1.96
STRADB-208ENST00000484098 SLC25A12O75746 678 aa2.83□□□□□ -1.96
STRADB-208ENST00000484098 SLC22A3O75751 556 aa2.83□□□□□ -1.96
STRADB-208ENST00000484098 PSMD10O75832 226 aa2.83□□□□□ -1.96
STRADB-208ENST00000484098 RECQL5O94762 991 aaPredicted RBP2.83□□□□□ -1.96
STRADB-208ENST00000484098 SEC31AO94979 1220 aaKnown RBP2.83□□□□□ -1.96
STRADB-208ENST00000484098 KAT7O95251 611 aa2.83□□□□□ -1.96
STRADB-208ENST00000484098 TUBBP07437 444 aa2.83□□□□□ -1.96
STRADB-208ENST00000484098 HOXB5P09067 269 aa2.83□□□□□ -1.96
STRADB-208ENST00000484098 ATF7P17544 494 aaPredicted RBP2.83□□□□□ -1.96
STRADB-208ENST00000484098 DESP17661 470 aa2.83□□□□□ -1.96
STRADB-208ENST00000484098 ERCC2P18074 760 aa2.83□□□□□ -1.96
STRADB-208ENST00000484098 CDAP32320 146 aa2.83□□□□□ -1.96
STRADB-208ENST00000484098 SLC8A1P32418 973 aa2.83□□□□□ -1.96
STRADB-208ENST00000484098 PIP4K2AP48426 406 aaPredicted RBP2.83□□□□□ -1.96
STRADB-208ENST00000484098 CAMPP49913 170 aa2.83□□□□□ -1.96
STRADB-208ENST00000484098 JAK3P52333 1124 aa2.83□□□□□ -1.96
STRADB-208ENST00000484098 PNLIPRP2P54317 469 aa2.83□□□□□ -1.96
STRADB-208ENST00000484098 ADPRHP54922 357 aa2.83□□□□□ -1.96
STRADB-208ENST00000484098 RPS13P62277 151 aaKnown RBP2.83□□□□□ -1.96
STRADB-208ENST00000484098 YWHAZP63104 245 aaKnown RBP2.83□□□□□ -1.96
STRADB-208ENST00000484098 B4GALNT1Q00973 533 aa2.83□□□□□ -1.96
STRADB-208ENST00000484098 IKQ13123 557 aaPredicted RBP2.83□□□□□ -1.96
STRADB-208ENST00000484098 SMU1Q2TAY7 513 aa2.83□□□□□ -1.96
STRADB-208ENST00000484098 ASTE1Q2TB18 679 aaPredicted RBP2.83□□□□□ -1.96
STRADB-208ENST00000484098 CC2D1BQ5T0F9 858 aaKnown RBP2.83□□□□□ -1.96
STRADB-208ENST00000484098 SERTAD4-AS1Q5TG53 156 aa2.83□□□□□ -1.96
STRADB-208ENST00000484098 KRT79Q5XKE5 535 aa2.83□□□□□ -1.96
STRADB-208ENST00000484098 CAVIN1Q6NZI2 390 aaKnown RBP2.83□□□□□ -1.96
STRADB-208ENST00000484098 TRAT1Q6PIZ9 186 aa2.83□□□□□ -1.96
STRADB-208ENST00000484098 CPLX2Q6PUV4 134 aaKnown RBP2.83□□□□□ -1.96
STRADB-208ENST00000484098 MSANTD1Q6ZTZ1 278 aa2.83□□□□□ -1.96
STRADB-208ENST00000484098 ERN2Q76MJ5 926 aaKnown RBP2.83□□□□□ -1.96
STRADB-208ENST00000484098 PRSS45Q7RTY3 260 aa2.83□□□□□ -1.96
STRADB-208ENST00000484098 UBE2Q1Q7Z7E8 422 aa2.83□□□□□ -1.96
STRADB-208ENST00000484098 FAM160B2Q86V87 743 aa2.83□□□□□ -1.96
STRADB-208ENST00000484098 TMEM200AQ86VY9 491 aa2.83□□□□□ -1.96
STRADB-208ENST00000484098 LAS2Q8IYD9 372 aa2.83□□□□□ -1.96
STRADB-208ENST00000484098 C12orf76Q8N812 135 aaPredicted RBP2.83□□□□□ -1.96
STRADB-208ENST00000484098 ZNF398Q8TD17 642 aa2.83□□□□□ -1.96
STRADB-208ENST00000484098 GRK7Q8WTQ7 553 aa2.83□□□□□ -1.96
STRADB-208ENST00000484098 ASB5Q8WWX0 329 aa2.83□□□□□ -1.96
STRADB-208ENST00000484098 ATP6V0A1Q93050 837 aa2.83□□□□□ -1.96
STRADB-208ENST00000484098 EXOC4Q96A65 974 aa2.83□□□□□ -1.96
STRADB-208ENST00000484098 PRR11Q96HE9 360 aaPredicted RBP2.83□□□□□ -1.96
STRADB-208ENST00000484098 CABS1Q96KC9 395 aa2.83□□□□□ -1.96
STRADB-208ENST00000484098 CCDC114Q96M63 670 aa2.83□□□□□ -1.96
STRADB-208ENST00000484098 HS6ST2Q96MM7 605 aa2.83□□□□□ -1.96
STRADB-208ENST00000484098 MYCBPQ99417 103 aaPredicted RBP2.83□□□□□ -1.96
STRADB-208ENST00000484098 SRSF8Q9BRL6 282 aaKnown RBP2.83□□□□□ -1.96
STRADB-208ENST00000484098 SLC25A23Q9BV35 468 aa2.83□□□□□ -1.96
STRADB-208ENST00000484098 ACAT2Q9BWD1 397 aa2.83□□□□□ -1.96
STRADB-208ENST00000484098 C1QTNF1Q9BXJ1 281 aa2.83□□□□□ -1.96
STRADB-208ENST00000484098 RNF26Q9BY78 433 aaPredicted RBP2.83□□□□□ -1.96
STRADB-208ENST00000484098 FUT8Q9BYC5 575 aa2.83□□□□□ -1.96
STRADB-208ENST00000484098 ANKRD2Q9GZV1 360 aa2.83□□□□□ -1.96
STRADB-208ENST00000484098 MMADHCQ9H3L0 296 aaPredicted RBP2.83□□□□□ -1.96
STRADB-208ENST00000484098 USP29Q9HBJ7 922 aa2.83□□□□□ -1.96
STRADB-208ENST00000484098 MBNL1Q9NR56 388 aaKnown RBP2.83□□□□□ -1.96
STRADB-208ENST00000484098 SNTG1Q9NSN8 517 aa2.83□□□□□ -1.96
STRADB-208ENST00000484098 PDRG1Q9NUG6 133 aa2.83□□□□□ -1.96
STRADB-208ENST00000484098 WSB2Q9NYS7 404 aaPredicted RBP2.83□□□□□ -1.96
STRADB-208ENST00000484098 UBA2Q9UBT2 640 aaPredicted RBP2.83□□□□□ -1.96
STRADB-208ENST00000484098 DHDHQ9UQ10 334 aa2.83□□□□□ -1.96
STRADB-208ENST00000484098 KLHL20Q9Y2M5 609 aa2.83□□□□□ -1.96
STRADB-208ENST00000484098 POMT1Q9Y6A1 747 aa2.83□□□□□ -1.96
STRADB-208ENST00000484098 CCDC180Q9P1Z9 1646 aa2.82□□□□□ -1.96
STRADB-208ENST00000484098 ARHGEF37A1IGU5 675 aa2.82□□□□□ -1.96
STRADB-208ENST00000484098 CCDC69A6NI79 296 aa2.82□□□□□ -1.96
STRADB-208ENST00000484098 BTBD19C9JJ37 291 aa2.82□□□□□ -1.96
STRADB-208ENST00000484098 MCIDASD6RGH6 385 aa2.82□□□□□ -1.96
STRADB-208ENST00000484098 ADAMDEC1O15204 470 aa2.82□□□□□ -1.96
STRADB-208ENST00000484098 PAPSS1O43252 624 aaPredicted RBP2.82□□□□□ -1.96
STRADB-208ENST00000484098 HCRTR2O43614 444 aa2.82□□□□□ -1.96
STRADB-208ENST00000484098 MITFO75030 526 aaPredicted RBP2.82□□□□□ -1.96
STRADB-208ENST00000484098 AVILO75366 819 aa2.82□□□□□ -1.96
STRADB-208ENST00000484098 FTCDO95954 541 aa2.82□□□□□ -1.96
STRADB-208ENST00000484098 ADAP00813 363 aa2.82□□□□□ -1.96
STRADB-208ENST00000484098 SERPINC1P01008 464 aa2.82□□□□□ -1.96
STRADB-208ENST00000484098 HLA-DQA2P01906 255 aa2.82□□□□□ -1.96
STRADB-208ENST00000484098 HEXAP06865 529 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms