RNA–Protein interactions for RNA: ENST00000483888.6

COL12A1-207, Transcript of collagen type XII alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL12A1, Length 9,637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-207ENST00000483888 CBLBQ13191 982 aa10.25□□□□□ -0.77
COL12A1-207ENST00000483888 DLG2Q15700 870 aa10.25□□□□□ -0.77
COL12A1-207ENST00000483888 DOK7Q18PE1 504 aa10.25□□□□□ -0.77
COL12A1-207ENST00000483888 GALNTL5Q7Z4T8 443 aa10.25□□□□□ -0.77
COL12A1-207ENST00000483888 SVOPLQ8N434 492 aa10.25□□□□□ -0.77
COL12A1-207ENST00000483888 DEDD2Q8WXF8 326 aa10.25□□□□□ -0.77
COL12A1-207ENST00000483888 NELL1Q92832 810 aa10.25□□□□□ -0.77
COL12A1-207ENST00000483888 MKRN2Q9H000 416 aaKnown RBP10.25□□□□□ -0.77
COL12A1-207ENST00000483888 FAM47E-STBD1D6RA91 191 aa10.25□□□□□ -0.77
COL12A1-207ENST00000483888 ITGAVP06756 1048 aa10.25□□□□□ -0.77
COL12A1-207ENST00000483888 PTX3P26022 381 aaPredicted RBP10.25□□□□□ -0.77
COL12A1-207ENST00000483888 S100GP29377 79 aa10.25□□□□□ -0.77
COL12A1-207ENST00000483888 SSTP61278 116 aa10.25□□□□□ -0.77
COL12A1-207ENST00000483888 GLYATQ6IB77 296 aa10.25□□□□□ -0.77
COL12A1-207ENST00000483888 GPSM1Q86YR5 675 aa10.25□□□□□ -0.77
COL12A1-207ENST00000483888 METTL4Q8N3J2 472 aa10.25□□□□□ -0.77
COL12A1-207ENST00000483888 TCEAL7Q9BRU2 100 aa10.25□□□□□ -0.77
COL12A1-207ENST00000483888 ZNF471Q9BX82 626 aaPredicted RBP10.25□□□□□ -0.77
COL12A1-207ENST00000483888 CACNA1FO60840 1977 aa10.25□□□□□ -0.77
COL12A1-207ENST00000483888 ATP6V1G2-DDX39BF2Z307 99 aa10.25□□□□□ -0.77
COL12A1-207ENST00000483888 ENDOUP21128 410 aaKnown RBP10.25□□□□□ -0.77
COL12A1-207ENST00000483888 LIPEQ05469 1076 aa10.25□□□□□ -0.77
COL12A1-207ENST00000483888 ZNF433Q8N7K0 673 aaPredicted RBP10.25□□□□□ -0.77
COL12A1-207ENST00000483888 C10orf82Q8WW14 230 aa10.25□□□□□ -0.77
COL12A1-207ENST00000483888 RGCCQ9H4X1 137 aa10.25□□□□□ -0.77
COL12A1-207ENST00000483888 ELAC1Q9H777 363 aaKnown RBP10.25□□□□□ -0.77
COL12A1-207ENST00000483888 KCNH4Q9UQ05 1017 aa10.25□□□□□ -0.77
COL12A1-207ENST00000483888 HIF3AQ9Y2N7 669 aa10.25□□□□□ -0.77
COL12A1-207ENST00000483888 A0A1W2PPW3 197 aa10.24□□□□□ -0.77
COL12A1-207ENST00000483888 SSX4O60224 188 aa10.24□□□□□ -0.77
COL12A1-207ENST00000483888 TSPAN8P19075 237 aa10.24□□□□□ -0.77
COL12A1-207ENST00000483888 CBX5P45973 191 aa10.24□□□□□ -0.77
COL12A1-207ENST00000483888 HYIQ5T013 277 aa10.24□□□□□ -0.77
COL12A1-207ENST00000483888 CIAPIN1Q6FI81 312 aa10.24□□□□□ -0.77
COL12A1-207ENST00000483888 KATNAL2Q8IYT4 538 aa10.24□□□□□ -0.77
COL12A1-207ENST00000483888 CNTD1Q8N815 330 aa10.24□□□□□ -0.77
COL12A1-207ENST00000483888 ARMC5Q96C12 935 aa10.24□□□□□ -0.77
COL12A1-207ENST00000483888 PWWP2AQ96N64 755 aa10.24□□□□□ -0.77
COL12A1-207ENST00000483888 MRPL57Q9BQC6 102 aaKnown RBP10.24□□□□□ -0.77
COL12A1-207ENST00000483888 KCNN2Q9H2S1 579 aa10.24□□□□□ -0.77
COL12A1-207ENST00000483888 ALG2Q9H553 416 aa10.24□□□□□ -0.77
COL12A1-207ENST00000483888 ADAM28Q9UKQ2 775 aa10.24□□□□□ -0.77
COL12A1-207ENST00000483888 PCDHGB3Q9Y5G1 929 aa10.24□□□□□ -0.77
COL12A1-207ENST00000483888 N6AMT1Q9Y5N5 214 aa10.24□□□□□ -0.77
COL12A1-207ENST00000483888 SMIM11AP58511 58 aa10.24□□□□□ -0.77
COL12A1-207ENST00000483888 CRADDP78560 199 aa10.24□□□□□ -0.77
COL12A1-207ENST00000483888 EPHA7Q15375 998 aa10.24□□□□□ -0.77
COL12A1-207ENST00000483888 EIF5AL1Q6IS14 154 aaKnown RBP10.24□□□□□ -0.77
COL12A1-207ENST00000483888 ZNF567Q8N184 647 aa10.24□□□□□ -0.77
COL12A1-207ENST00000483888 PRELID2Q8N945 189 aa10.24□□□□□ -0.77
COL12A1-207ENST00000483888 ISM1B1AKI9 464 aa10.24□□□□□ -0.77
COL12A1-207ENST00000483888 M0QYT0 321 aa10.24□□□□□ -0.77
COL12A1-207ENST00000483888 CRHR1P34998 444 aa10.24□□□□□ -0.77
COL12A1-207ENST00000483888 STARD3Q14849 445 aa10.24□□□□□ -0.77
COL12A1-207ENST00000483888 ESRP1Q6NXG1 681 aaKnown RBP10.24□□□□□ -0.77
COL12A1-207ENST00000483888 LAPTM4BQ86VI4 370 aa10.24□□□□□ -0.77
COL12A1-207ENST00000483888 ZC3HC1Q86WB0 502 aaKnown RBP10.24□□□□□ -0.77
COL12A1-207ENST00000483888 RALGPS2Q86X27 583 aaPredicted RBP10.24□□□□□ -0.77
COL12A1-207ENST00000483888 KIAA0895Q8NCT3 520 aa10.24□□□□□ -0.77
COL12A1-207ENST00000483888 LILRB4Q8NHJ6 448 aa10.24□□□□□ -0.77
COL12A1-207ENST00000483888 SNX27Q96L92 541 aa10.24□□□□□ -0.77
COL12A1-207ENST00000483888 SPATA9Q9BWV2 254 aa10.24□□□□□ -0.77
COL12A1-207ENST00000483888 MTMR12Q9C0I1 747 aa10.24□□□□□ -0.77
COL12A1-207ENST00000483888 GPATCH2LQ9NWQ4 482 aa10.24□□□□□ -0.77
COL12A1-207ENST00000483888 HCN3Q9P1Z3 774 aa10.24□□□□□ -0.77
COL12A1-207ENST00000483888 BTNL10A8MVZ5 291 aa10.24□□□□□ -0.77
COL12A1-207ENST00000483888 SUV39H1O43463 412 aa10.24□□□□□ -0.77
COL12A1-207ENST00000483888 ATP6AP2O75787 350 aa10.24□□□□□ -0.77
COL12A1-207ENST00000483888 FARS2O95363 451 aaKnown RBP10.24□□□□□ -0.77
COL12A1-207ENST00000483888 TNFAIP1Q13829 316 aa10.24□□□□□ -0.77
COL12A1-207ENST00000483888 ANGEL2Q5VTE6 544 aaKnown RBP10.24□□□□□ -0.77
COL12A1-207ENST00000483888 SYT12Q8IV01 421 aa10.24□□□□□ -0.77
COL12A1-207ENST00000483888 TRIM48Q8IWZ4 208 aa10.24□□□□□ -0.77
COL12A1-207ENST00000483888 SLC44A5Q8NCS7 719 aa10.24□□□□□ -0.77
COL12A1-207ENST00000483888 FAM156AQ8NDB6 213 aa10.24□□□□□ -0.77
COL12A1-207ENST00000483888 ARL5BQ96KC2 179 aa10.24□□□□□ -0.77
COL12A1-207ENST00000483888 AIF1LQ9BQI0 150 aa10.24□□□□□ -0.77
COL12A1-207ENST00000483888 BTRCQ9Y297 605 aa10.24□□□□□ -0.77
COL12A1-207ENST00000483888 FRMPD4Q14CM0 1322 aa10.24□□□□□ -0.77
COL12A1-207ENST00000483888 PPEF1O14829 653 aaPredicted RBP10.24□□□□□ -0.77
COL12A1-207ENST00000483888 HNRNPFP52597 415 aaKnown RBP10.24□□□□□ -0.77
COL12A1-207ENST00000483888 PCDH1Q08174 1060 aa10.24□□□□□ -0.77
COL12A1-207ENST00000483888 NFIAQ12857 509 aa10.24□□□□□ -0.77
COL12A1-207ENST00000483888 PRKG2Q13237 762 aa10.24□□□□□ -0.77
COL12A1-207ENST00000483888 CAMK2GQ13555 558 aaPredicted RBP10.24□□□□□ -0.77
COL12A1-207ENST00000483888 GALEQ14376 348 aa10.24□□□□□ -0.77
COL12A1-207ENST00000483888 PAQR7Q86WK9 346 aa10.24□□□□□ -0.77
COL12A1-207ENST00000483888 DPCDQ9BVM2 203 aaPredicted RBP10.24□□□□□ -0.77
COL12A1-207ENST00000483888 PPIL3Q9H2H8 161 aaKnown RBP10.24□□□□□ -0.77
COL12A1-207ENST00000483888 PPA2Q9H2U2 334 aa10.24□□□□□ -0.77
COL12A1-207ENST00000483888 ACSS3Q9H6R3 686 aa10.24□□□□□ -0.77
COL12A1-207ENST00000483888 ZFP14Q9HCL3 533 aa10.24□□□□□ -0.77
COL12A1-207ENST00000483888 TRAV6A0A075B6T7 132 aa10.24□□□□□ -0.77
COL12A1-207ENST00000483888 BTN3A1O00481 513 aa10.24□□□□□ -0.77
COL12A1-207ENST00000483888 FOXD2O60548 495 aaPredicted RBP10.24□□□□□ -0.77
COL12A1-207ENST00000483888 SLC22A3O75751 556 aa10.24□□□□□ -0.77
COL12A1-207ENST00000483888 ANXA5P08758 320 aa10.24□□□□□ -0.77
COL12A1-207ENST00000483888 HNRNPLP14866 589 aaKnown RBP eCLIP10.24□□□□□ -0.77
COL12A1-207ENST00000483888 ETV1P50549 477 aa10.24□□□□□ -0.77
COL12A1-207ENST00000483888 EFNA5P52803 228 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms