RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 PAF1Q8N7H5 531 aa26.21■■□□□ 1.79
SHOX2-204ENST00000483851 TTC8Q8TAM2 541 aa26.21■■□□□ 1.79
SHOX2-204ENST00000483851 MRGPRX3Q96LB0 322 aa26.21■■□□□ 1.79
SHOX2-204ENST00000483851 ZFYVE1Q9HBF4 777 aa26.21■■□□□ 1.79
SHOX2-204ENST00000483851 LMCD1Q9NZU5 365 aa26.21■■□□□ 1.79
SHOX2-204ENST00000483851 KLHL2O95198 593 aa26.21■■□□□ 1.79
SHOX2-204ENST00000483851 DLDP09622 509 aaKnown RBP26.21■■□□□ 1.79
SHOX2-204ENST00000483851 CPA3P15088 417 aa26.21■■□□□ 1.79
SHOX2-204ENST00000483851 FCARP24071 287 aa26.21■■□□□ 1.79
SHOX2-204ENST00000483851 GRK2P25098 689 aa26.21■■□□□ 1.79
SHOX2-204ENST00000483851 SKIV2L2P42285 1042 aaKnown RBP26.21■■□□□ 1.79
SHOX2-204ENST00000483851 TTPAP49638 278 aa26.21■■□□□ 1.79
SHOX2-204ENST00000483851 PTPN5P54829 565 aa26.21■■□□□ 1.79
SHOX2-204ENST00000483851 IRF9Q00978 393 aa26.21■■□□□ 1.79
SHOX2-204ENST00000483851 ATAT1Q5SQI0 421 aa26.21■■□□□ 1.79
SHOX2-204ENST00000483851 DPY19L3Q6ZPD9 716 aa26.21■■□□□ 1.79
SHOX2-204ENST00000483851 SREK1Q8WXA9 508 aaKnown RBP26.21■■□□□ 1.79
SHOX2-204ENST00000483851 ASIC4Q96FT7 647 aa26.21■■□□□ 1.79
SHOX2-204ENST00000483851 MECRQ9BV79 373 aa26.21■■□□□ 1.79
SHOX2-204ENST00000483851 MGRN1O60291 552 aa26.2■■□□□ 1.78
SHOX2-204ENST00000483851 TULP3O75386 442 aa26.2■■□□□ 1.78
SHOX2-204ENST00000483851 TROVE2P10155 538 aaKnown RBP eCLIP26.2■■□□□ 1.78
SHOX2-204ENST00000483851 POLR2LP62875 67 aaKnown RBP26.2■■□□□ 1.78
SHOX2-204ENST00000483851 ADAM15Q13444 863 aa26.2■■□□□ 1.78
SHOX2-204ENST00000483851 PCLAFQ15004 111 aa26.2■■□□□ 1.78
SHOX2-204ENST00000483851 CHI3L2Q15782 390 aa26.2■■□□□ 1.78
SHOX2-204ENST00000483851 RBM20Q5T481 1227 aaKnown RBP26.2■■□□□ 1.78
SHOX2-204ENST00000483851 TRIM68Q6AZZ1 485 aa26.2■■□□□ 1.78
SHOX2-204ENST00000483851 LYSMD3Q7Z3D4 306 aa26.2■■□□□ 1.78
SHOX2-204ENST00000483851 TBC1D1Q86TI0 1168 aaPredicted RBP26.2■■□□□ 1.78
SHOX2-204ENST00000483851 CENPLQ8N0S6 344 aaPredicted RBP26.2■■□□□ 1.78
SHOX2-204ENST00000483851 KDM1BQ8NB78 822 aa26.2■■□□□ 1.78
SHOX2-204ENST00000483851 OR2A12Q8NGT7 310 aa26.2■■□□□ 1.78
SHOX2-204ENST00000483851 FRS2Q8WU20 508 aa26.2■■□□□ 1.78
SHOX2-204ENST00000483851 SCRN2Q96FV2 425 aa26.2■■□□□ 1.78
SHOX2-204ENST00000483851 LRIG1Q96JA1 1093 aa26.2■■□□□ 1.78
SHOX2-204ENST00000483851 SMIM14Q96QK8 99 aa26.2■■□□□ 1.78
SHOX2-204ENST00000483851 ALDH3A1P30838 453 aa26.19■■□□□ 1.78
SHOX2-204ENST00000483851 MC4RP32245 332 aa26.19■■□□□ 1.78
SHOX2-204ENST00000483851 PRKAA2P54646 552 aa26.19■■□□□ 1.78
SHOX2-204ENST00000483851 ELF3P78545 371 aaPredicted RBP26.19■■□□□ 1.78
SHOX2-204ENST00000483851 FCHO2Q0JRZ9 810 aa26.19■■□□□ 1.78
SHOX2-204ENST00000483851 SEMA3AQ14563 771 aa26.19■■□□□ 1.78
SHOX2-204ENST00000483851 CDKN3Q16667 212 aa26.19■■□□□ 1.78
SHOX2-204ENST00000483851 USP45Q70EL2 814 aa26.19■■□□□ 1.78
SHOX2-204ENST00000483851 ASRGL1Q7L266 308 aa26.19■■□□□ 1.78
SHOX2-204ENST00000483851 CBARPQ8N350 705 aaPredicted RBP26.19■■□□□ 1.78
SHOX2-204ENST00000483851 MCCC1Q96RQ3 725 aaPredicted RBP26.19■■□□□ 1.78
SHOX2-204ENST00000483851 ZNF358Q9NW07 568 aa26.19■■□□□ 1.78
SHOX2-204ENST00000483851 FKBPLQ9UIM3 349 aa26.19■■□□□ 1.78
SHOX2-204ENST00000483851 SNNO75324 88 aaPredicted RBP26.19■■□□□ 1.78
SHOX2-204ENST00000483851 CTPS1P17812 591 aa26.19■■□□□ 1.78
SHOX2-204ENST00000483851 GKP32189 559 aa26.19■■□□□ 1.78
SHOX2-204ENST00000483851 HNF1BP35680 557 aa26.19■■□□□ 1.78
SHOX2-204ENST00000483851 BST1Q10588 318 aa26.19■■□□□ 1.78
SHOX2-204ENST00000483851 EIF4HQ15056 248 aaKnown RBP26.19■■□□□ 1.78
SHOX2-204ENST00000483851 CES5AQ6NT32 575 aa26.19■■□□□ 1.78
SHOX2-204ENST00000483851 LDB1Q86U70 411 aaPredicted RBP26.19■■□□□ 1.78
SHOX2-204ENST00000483851 HEPHQ9BQS7 1158 aa26.19■■□□□ 1.78
SHOX2-204ENST00000483851 THAP1Q9NVV9 213 aa26.19■■□□□ 1.78
SHOX2-204ENST00000483851 RUVBL2Q9Y230 463 aaKnown RBP26.19■■□□□ 1.78
SHOX2-204ENST00000483851 LINC01565O15544 149 aa26.18■■□□□ 1.78
SHOX2-204ENST00000483851 H2AFYO75367 372 aaKnown RBP26.18■■□□□ 1.78
SHOX2-204ENST00000483851 NDUFS3O75489 264 aa26.18■■□□□ 1.78
SHOX2-204ENST00000483851 ALPIP09923 528 aa26.18■■□□□ 1.78
SHOX2-204ENST00000483851 ARSAP15289 507 aa26.18■■□□□ 1.78
SHOX2-204ENST00000483851 SUOXP51687 545 aa26.18■■□□□ 1.78
SHOX2-204ENST00000483851 XIAPP98170 497 aa26.18■■□□□ 1.78
SHOX2-204ENST00000483851 CACNG1Q06432 222 aa26.18■■□□□ 1.78
SHOX2-204ENST00000483851 STX3Q13277 289 aa26.18■■□□□ 1.78
SHOX2-204ENST00000483851 PEX6Q13608 980 aa26.18■■□□□ 1.78
SHOX2-204ENST00000483851 FAM83EQ2M2I3 478 aa26.18■■□□□ 1.78
SHOX2-204ENST00000483851 BRAT1Q6PJG6 821 aa26.18■■□□□ 1.78
SHOX2-204ENST00000483851 CERS6Q6ZMG9 384 aa26.18■■□□□ 1.78
SHOX2-204ENST00000483851 TPRG1Q6ZUI0 275 aa26.18■■□□□ 1.78
SHOX2-204ENST00000483851 Q6ZVU0 165 aa26.18■■□□□ 1.78
SHOX2-204ENST00000483851 PPP1R14CQ8TAE6 165 aa26.18■■□□□ 1.78
SHOX2-204ENST00000483851 HCAR2Q8TDS4 363 aa26.18■■□□□ 1.78
SHOX2-204ENST00000483851 TBRG4Q969Z0 631 aaKnown RBP eCLIP26.18■■□□□ 1.78
SHOX2-204ENST00000483851 NDNQ99608 321 aa26.18■■□□□ 1.78
SHOX2-204ENST00000483851 OLFM1Q99784 485 aa26.18■■□□□ 1.78
SHOX2-204ENST00000483851 EBF3Q9H4W6 596 aa26.18■■□□□ 1.78
SHOX2-204ENST00000483851 ZDHHC6Q9H6R6 413 aa26.18■■□□□ 1.78
SHOX2-204ENST00000483851 DEC1Q9P2X7 70 aa26.18■■□□□ 1.78
SHOX2-204ENST00000483851 APPL1Q9UKG1 709 aa26.18■■□□□ 1.78
SHOX2-204ENST00000483851 COMMD10Q9Y6G5 202 aa26.18■■□□□ 1.78
SHOX2-204ENST00000483851 C1orf232A0A0U1RR37 186 aa26.17■■□□□ 1.78
SHOX2-204ENST00000483851 TRIM24O15164 1050 aa26.17■■□□□ 1.78
SHOX2-204ENST00000483851 WISP3O95389 354 aaPredicted RBP26.17■■□□□ 1.78
SHOX2-204ENST00000483851 SERPINE1P05121 402 aa26.17■■□□□ 1.78
SHOX2-204ENST00000483851 CD9P21926 228 aa26.17■■□□□ 1.78
SHOX2-204ENST00000483851 FDXRP22570 491 aa26.17■■□□□ 1.78
SHOX2-204ENST00000483851 ADARP55265 1226 aaKnown RBP26.17■■□□□ 1.78
SHOX2-204ENST00000483851 IRX4P78413 519 aa26.17■■□□□ 1.78
SHOX2-204ENST00000483851 SPDYAQ5MJ70 313 aa26.17■■□□□ 1.78
SHOX2-204ENST00000483851 COL13A1Q5TAT6 717 aaPredicted RBP26.17■■□□□ 1.78
SHOX2-204ENST00000483851 AGAP9Q5VTM2 703 aa26.17■■□□□ 1.78
SHOX2-204ENST00000483851 GDPD4Q6W3E5 623 aa26.17■■□□□ 1.78
SHOX2-204ENST00000483851 KCTD4Q8WVF5 259 aa26.17■■□□□ 1.78
SHOX2-204ENST00000483851 LPGAT1Q92604 370 aa26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms