RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 UBE2UQ5VVX9 321 aa11.81□□□□□ -0.52
VTI1A-205ENST00000483122 LCLAT1Q6UWP7 414 aa11.81□□□□□ -0.52
VTI1A-205ENST00000483122 LARP4Q71RC2 724 aaKnown RBP eCLIP11.81□□□□□ -0.52
VTI1A-205ENST00000483122 SLC26A9Q7LBE3 791 aa11.81□□□□□ -0.52
VTI1A-205ENST00000483122 DENND6AQ8IWF6 608 aa11.81□□□□□ -0.52
VTI1A-205ENST00000483122 GOLM1Q8NBJ4 401 aa11.81□□□□□ -0.52
VTI1A-205ENST00000483122 OR7A2PQ8NGA2 310 aa11.81□□□□□ -0.52
VTI1A-205ENST00000483122 PSMA8Q8TAA3 256 aa11.81□□□□□ -0.52
VTI1A-205ENST00000483122 ZNF668Q96K58 619 aaPredicted RBP11.81□□□□□ -0.52
VTI1A-205ENST00000483122 BTBD2Q9BX70 525 aa11.81□□□□□ -0.52
VTI1A-205ENST00000483122 MARCH7Q9H992 704 aa11.81□□□□□ -0.52
VTI1A-205ENST00000483122 MAGEE1Q9HCI5 957 aa11.81□□□□□ -0.52
VTI1A-205ENST00000483122 ABCB10Q9NRK6 738 aa11.81□□□□□ -0.52
VTI1A-205ENST00000483122 KLHL8Q9P2G9 620 aaPredicted RBP11.81□□□□□ -0.52
VTI1A-205ENST00000483122 B4GALT4O60513 344 aa11.81□□□□□ -0.52
VTI1A-205ENST00000483122 NDUFS2O75306 463 aa11.81□□□□□ -0.52
VTI1A-205ENST00000483122 AGXTP21549 392 aa11.81□□□□□ -0.52
VTI1A-205ENST00000483122 HADHAP40939 763 aa11.81□□□□□ -0.52
VTI1A-205ENST00000483122 GSK3BP49841 420 aa11.81□□□□□ -0.52
VTI1A-205ENST00000483122 ZNF280AP59817 542 aaPredicted RBP11.81□□□□□ -0.52
VTI1A-205ENST00000483122 VBP1P61758 197 aa11.81□□□□□ -0.52
VTI1A-205ENST00000483122 POU5F1BQ06416 359 aa11.81□□□□□ -0.52
VTI1A-205ENST00000483122 ILF2Q12905 390 aaKnown RBP11.81□□□□□ -0.52
VTI1A-205ENST00000483122 PSMD5Q16401 504 aa11.81□□□□□ -0.52
VTI1A-205ENST00000483122 HIST2H2ACQ16777 129 aaPredicted RBP11.81□□□□□ -0.52
VTI1A-205ENST00000483122 RABL3Q5HYI8 236 aa11.81□□□□□ -0.52
VTI1A-205ENST00000483122 ADCK1Q86TW2 530 aa11.81□□□□□ -0.52
VTI1A-205ENST00000483122 TBC1D21Q8IYX1 336 aa11.81□□□□□ -0.52
VTI1A-205ENST00000483122 MINDY1Q8N5J2 469 aa11.81□□□□□ -0.52
VTI1A-205ENST00000483122 GLMNQ92990 594 aa11.81□□□□□ -0.52
VTI1A-205ENST00000483122 EMILIN2Q9BXX0 1053 aa11.81□□□□□ -0.52
VTI1A-205ENST00000483122 PCDHB3Q9Y5E6 796 aa11.81□□□□□ -0.52
VTI1A-205ENST00000483122 PCDHGA8Q9Y5G5 932 aa11.81□□□□□ -0.52
VTI1A-205ENST00000483122 MAGEB16A2A368 324 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 TTC34A8MYJ7 566 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 M0R3G1 203 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 RFPL2O75678 378 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 PRKCBP05771 671 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 CDH1P12830 882 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 PCMT1P22061 227 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 ATP5F1P24539 256 aaPredicted RBP11.8□□□□□ -0.52
VTI1A-205ENST00000483122 CASP3P42574 277 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 ARSFP54793 590 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 DNAJB13P59910 316 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 RAB10P61026 200 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 STX1BP61266 288 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 SP2Q02086 613 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 CTBP1Q13363 440 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 CTU2Q2VPK5 515 aaKnown RBP11.8□□□□□ -0.52
VTI1A-205ENST00000483122 C6orf141Q5SZD1 244 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 PPP1R26Q5T8A7 1209 aaPredicted RBP11.8□□□□□ -0.52
VTI1A-205ENST00000483122 EEF1DP3Q658K8 133 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 IL31Q6EBC2 164 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 HEATR4Q86WZ0 1026 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 PAPD5Q8NDF8 572 aaKnown RBP11.8□□□□□ -0.52
VTI1A-205ENST00000483122 CHDHQ8NE62 594 aaPredicted RBP11.8□□□□□ -0.52
VTI1A-205ENST00000483122 PIK3C3Q8NEB9 887 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 HDAC2Q92769 488 aaKnown RBP11.8□□□□□ -0.52
VTI1A-205ENST00000483122 C17orf80Q9BSJ5 609 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 NTN4Q9HB63 628 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 SLC38A10Q9HBR0 1119 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 CPNE5Q9HCH3 593 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 HPS4Q9NQG7 708 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 ZNF302Q9NR11 478 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 MRGBPQ9NV56 204 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 GTF2IRD1Q9UHL9 959 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 CARD8Q9Y2G2 431 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 PCDHA9Q9Y5H5 950 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 FAM95CA0A1B0GW59 222 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 ZBBXA8MT70 800 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 UBFD1O14562 309 aaKnown RBP11.8□□□□□ -0.52
VTI1A-205ENST00000483122 DYRK3O43781 588 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 MGEA5O60502 916 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 KPNA6O60684 536 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 THRBP10828 461 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 MAGP20916 626 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 ARL4AP40617 200 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 ALDH7A1P49419 539 aaKnown RBP11.8□□□□□ -0.52
VTI1A-205ENST00000483122 PHC1P78364 1004 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 DGUOKQ16854 277 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 AASDHQ4L235 1098 aaPredicted RBP11.8□□□□□ -0.52
VTI1A-205ENST00000483122 LAIR2Q6ISS4 152 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 PRMT9Q6P2P2 845 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 FAM131BQ86XD5 332 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 RNF135Q8IUD6 432 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 LRRC49Q8IUZ0 686 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 MICALL2Q8IY33 904 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 C8orf59Q8N0T1 100 aaPredicted RBP11.8□□□□□ -0.52
VTI1A-205ENST00000483122 AFAP1L2Q8N4X5 818 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 DNAJB14Q8TBM8 379 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 VPS33AQ96AX1 596 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 SDCCAG3Q96C92 435 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 LRRC58Q96CX6 371 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 PHF21BQ96EK2 531 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 C11orf84Q9BUA3 381 aaPredicted RBP11.8□□□□□ -0.52
VTI1A-205ENST00000483122 MLPHQ9BV36 600 aaPredicted RBP11.8□□□□□ -0.52
VTI1A-205ENST00000483122 CHID1Q9BWS9 393 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 PIF1Q9H611 641 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 EPS8L2Q9H6S3 715 aa11.8□□□□□ -0.52
VTI1A-205ENST00000483122 SP140LQ9H930 580 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms