RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 CDH19Q9H159 772 aa16.57■□□□□ 0.24
HMGN1-214ENST00000482733 WDR26Q9H7D7 661 aa16.57■□□□□ 0.24
HMGN1-214ENST00000482733 DNAJC28Q9NX36 388 aa16.57■□□□□ 0.24
HMGN1-214ENST00000482733 HACD3Q9P035 362 aa16.57■□□□□ 0.24
HMGN1-214ENST00000482733 ZNF148Q9UQR1 794 aa16.57■□□□□ 0.24
HMGN1-214ENST00000482733 OR1A2Q9Y585 309 aa16.57■□□□□ 0.24
HMGN1-214ENST00000482733 ANKRD36A6QL64 1941 aa16.57■□□□□ 0.24
HMGN1-214ENST00000482733 GOLGA8CPA6NN73 597 aa16.56■□□□□ 0.24
HMGN1-214ENST00000482733 F5H423 210 aaPredicted RBP16.56■□□□□ 0.24
HMGN1-214ENST00000482733 FGF1P05230 155 aa16.56■□□□□ 0.24
HMGN1-214ENST00000482733 ATXN1LP0C7T5 689 aaKnown RBP16.56■□□□□ 0.24
HMGN1-214ENST00000482733 CXCR5P32302 372 aa16.56■□□□□ 0.24
HMGN1-214ENST00000482733 ACTN2P35609 894 aa16.56■□□□□ 0.24
HMGN1-214ENST00000482733 BLKP51451 505 aa16.56■□□□□ 0.24
HMGN1-214ENST00000482733 SIX1Q15475 284 aaPredicted RBP16.56■□□□□ 0.24
HMGN1-214ENST00000482733 SLC1A5Q15758 541 aa16.56■□□□□ 0.24
HMGN1-214ENST00000482733 SIRPB2Q5JXA9 342 aa16.56■□□□□ 0.24
HMGN1-214ENST00000482733 ERMP1Q7Z2K6 904 aa16.56■□□□□ 0.24
HMGN1-214ENST00000482733 KLHDC8BQ8IXV7 354 aa16.56■□□□□ 0.24
HMGN1-214ENST00000482733 RASGEF1CQ8N431 466 aa16.56■□□□□ 0.24
HMGN1-214ENST00000482733 RHBDD1Q8TEB9 315 aa16.56■□□□□ 0.24
HMGN1-214ENST00000482733 TBATAQ96M53 351 aa16.56■□□□□ 0.24
HMGN1-214ENST00000482733 WDR92Q96MX6 357 aa16.56■□□□□ 0.24
HMGN1-214ENST00000482733 CDC6Q99741 560 aa16.56■□□□□ 0.24
HMGN1-214ENST00000482733 GPR63Q9BZJ6 419 aa16.56■□□□□ 0.24
HMGN1-214ENST00000482733 ABCG8Q9H221 673 aa16.56■□□□□ 0.24
HMGN1-214ENST00000482733 PHPT1Q9NRX4 125 aaPredicted RBP16.56■□□□□ 0.24
HMGN1-214ENST00000482733 PCOLCE2Q9UKZ9 415 aa16.56■□□□□ 0.24
HMGN1-214ENST00000482733 TTC7AQ9ULT0 858 aaPredicted RBP16.56■□□□□ 0.24
HMGN1-214ENST00000482733 PYCARDQ9ULZ3 195 aa16.56■□□□□ 0.24
HMGN1-214ENST00000482733 DRG1Q9Y295 367 aaKnown RBP16.56■□□□□ 0.24
HMGN1-214ENST00000482733 ZNF711Q9Y462 761 aa16.56■□□□□ 0.24
HMGN1-214ENST00000482733 ADAMTS9Q9P2N4 1935 aa16.55■□□□□ 0.24
HMGN1-214ENST00000482733 PSMD3O43242 534 aa16.55■□□□□ 0.24
HMGN1-214ENST00000482733 PIAS2O75928 621 aa16.55■□□□□ 0.24
HMGN1-214ENST00000482733 ATP1A1P05023 1023 aaKnown RBP16.55■□□□□ 0.24
HMGN1-214ENST00000482733 JUNDP17535 347 aa16.55■□□□□ 0.24
HMGN1-214ENST00000482733 GPR1P46091 355 aa16.55■□□□□ 0.24
HMGN1-214ENST00000482733 SPINT3P49223 89 aa16.55■□□□□ 0.24
HMGN1-214ENST00000482733 GDF10P55107 478 aa16.55■□□□□ 0.24
HMGN1-214ENST00000482733 PPARDQ03181 441 aa16.55■□□□□ 0.24
HMGN1-214ENST00000482733 BNIP3Q12983 259 aa16.55■□□□□ 0.24
HMGN1-214ENST00000482733 EIF2B5Q13144 721 aaKnown RBP16.55■□□□□ 0.24
HMGN1-214ENST00000482733 PPM1JQ5JR12 505 aa16.55■□□□□ 0.24
HMGN1-214ENST00000482733 TPRG1LQ5T0D9 272 aa16.55■□□□□ 0.24
HMGN1-214ENST00000482733 RAET1GQ6H3X3 334 aa16.55■□□□□ 0.24
HMGN1-214ENST00000482733 PSAPL1Q6NUJ1 521 aa16.55■□□□□ 0.24
HMGN1-214ENST00000482733 ENPP7Q6UWV6 458 aa16.55■□□□□ 0.24
HMGN1-214ENST00000482733 KDM7AQ6ZMT4 941 aa16.55■□□□□ 0.24
HMGN1-214ENST00000482733 LYSMD3Q7Z3D4 306 aa16.55■□□□□ 0.24
HMGN1-214ENST00000482733 TMC3Q7Z5M5 1100 aa16.55■□□□□ 0.24
HMGN1-214ENST00000482733 GATAD2AQ86YP4 633 aa16.55■□□□□ 0.24
HMGN1-214ENST00000482733 SLC25A41Q8N5S1 370 aa16.55■□□□□ 0.24
HMGN1-214ENST00000482733 FUBP1Q96AE4 644 aaKnown RBP16.55■□□□□ 0.24
HMGN1-214ENST00000482733 GORASP1Q9BQQ3 440 aa16.55■□□□□ 0.24
HMGN1-214ENST00000482733 FICDQ9BVA6 458 aa16.55■□□□□ 0.24
HMGN1-214ENST00000482733 TEX101Q9BY14 249 aa16.55■□□□□ 0.24
HMGN1-214ENST00000482733 FAM83DQ9H4H8 585 aa16.55■□□□□ 0.24
HMGN1-214ENST00000482733 FEZ2Q9UHY8 353 aaPredicted RBP16.55■□□□□ 0.24
HMGN1-214ENST00000482733 SHOC2Q9UQ13 582 aa16.55■□□□□ 0.24
HMGN1-214ENST00000482733 DNAH14Q0VDD8 3507 aa16.54■□□□□ 0.24
HMGN1-214ENST00000482733 A0A0U1RQS6 177 aa16.54■□□□□ 0.24
HMGN1-214ENST00000482733 NEMP2A6NFY4 417 aa16.54■□□□□ 0.24
HMGN1-214ENST00000482733 USP27XA6NNY8 438 aa16.54■□□□□ 0.24
HMGN1-214ENST00000482733 K7ESM1 405 aa16.54■□□□□ 0.24
HMGN1-214ENST00000482733 CES2O00748 559 aa16.54■□□□□ 0.24
HMGN1-214ENST00000482733 TNFRSF10CO14798 259 aa16.54■□□□□ 0.24
HMGN1-214ENST00000482733 CBFA2T3O75081 653 aa16.54■□□□□ 0.24
HMGN1-214ENST00000482733 PIRTP0C851 137 aa16.54■□□□□ 0.24
HMGN1-214ENST00000482733 MYCLP1P12525 358 aaPredicted RBP16.54■□□□□ 0.24
HMGN1-214ENST00000482733 DGKAP23743 735 aa16.54■□□□□ 0.24
HMGN1-214ENST00000482733 ADRA1AP35348 466 aa16.54■□□□□ 0.24
HMGN1-214ENST00000482733 SNX1Q13596 522 aa16.54■□□□□ 0.24
HMGN1-214ENST00000482733 TRIP6Q15654 476 aaKnown RBP16.54■□□□□ 0.24
HMGN1-214ENST00000482733 HS1BP3Q53T59 392 aa16.54■□□□□ 0.24
HMGN1-214ENST00000482733 ZNF542PQ5EBM4 170 aa16.54■□□□□ 0.24
HMGN1-214ENST00000482733 ADAMTSL4Q6UY14 1074 aa16.54■□□□□ 0.24
HMGN1-214ENST00000482733 RANBP10Q6VN20 620 aa16.54■□□□□ 0.24
HMGN1-214ENST00000482733 KANSL1Q7Z3B3 1105 aa16.54■□□□□ 0.24
HMGN1-214ENST00000482733 HEATR4Q86WZ0 1026 aa16.54■□□□□ 0.24
HMGN1-214ENST00000482733 PHACTR4Q8IZ21 702 aa16.54■□□□□ 0.24
HMGN1-214ENST00000482733 CCDC89Q8N998 374 aa16.54■□□□□ 0.24
HMGN1-214ENST00000482733 BAHD1Q8TBE0 780 aaPredicted RBP16.54■□□□□ 0.24
HMGN1-214ENST00000482733 OSBPL9Q96SU4 736 aa16.54■□□□□ 0.24
HMGN1-214ENST00000482733 SLC13A1Q9BZW2 595 aa16.54■□□□□ 0.24
HMGN1-214ENST00000482733 NFKBIL1Q9UBC1 381 aaPredicted RBP16.54■□□□□ 0.24
HMGN1-214ENST00000482733 SPASTQ9UBP0 616 aa16.54■□□□□ 0.24
HMGN1-214ENST00000482733 KLQ9UEF7 1012 aa16.54■□□□□ 0.24
HMGN1-214ENST00000482733 CD84Q9UIB8 345 aa16.54■□□□□ 0.24
HMGN1-214ENST00000482733 CSNK1G3Q9Y6M4 447 aa16.54■□□□□ 0.24
HMGN1-214ENST00000482733 SPTBN4Q9H254 2564 aa16.54■□□□□ 0.24
HMGN1-214ENST00000482733 DCHS1Q96JQ0 3298 aa16.53■□□□□ 0.24
HMGN1-214ENST00000482733 SDC3O75056 442 aa16.53■□□□□ 0.24
HMGN1-214ENST00000482733 RASGRP1O95267 797 aa16.53■□□□□ 0.24
HMGN1-214ENST00000482733 METTL18O95568 372 aa16.53■□□□□ 0.24
HMGN1-214ENST00000482733 AGTP01019 485 aa16.53■□□□□ 0.24
HMGN1-214ENST00000482733 IFNB1P01574 187 aa16.53■□□□□ 0.24
HMGN1-214ENST00000482733 ALPPL2P10696 532 aa16.53■□□□□ 0.24
HMGN1-214ENST00000482733 HMGCLP35914 325 aa16.53■□□□□ 0.24
HMGN1-214ENST00000482733 FDFT1P37268 417 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms