RNA–Protein interactions for RNA: ENST00000480227.5

PKD1-213, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 1 (best)

Gene PKD1, Length 2,353 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-213ENST00000480227 ARPINQ7Z6K5 226 aa17.11■□□□□ 0.33
PKD1-213ENST00000480227 OR4L1Q8NH43 312 aa17.11■□□□□ 0.33
PKD1-213ENST00000480227 BRSK1Q8TDC3 778 aa17.11■□□□□ 0.33
PKD1-213ENST00000480227 ATP6V1E2Q96A05 226 aa17.11■□□□□ 0.33
PKD1-213ENST00000480227 CATSPERZQ9NTU4 200 aa17.11■□□□□ 0.33
PKD1-213ENST00000480227 PCDHGB4Q9UN71 923 aa17.11■□□□□ 0.33
PKD1-213ENST00000480227 PCDHGB5Q9Y5G0 923 aa17.11■□□□□ 0.33
PKD1-213ENST00000480227 SPO11Q9Y5K1 396 aa17.11■□□□□ 0.33
PKD1-213ENST00000480227 UBXN8O00124 270 aa17.1■□□□□ 0.33
PKD1-213ENST00000480227 DNAJA2O60884 412 aa17.1■□□□□ 0.33
PKD1-213ENST00000480227 RPP40O75818 363 aaKnown RBP17.1■□□□□ 0.33
PKD1-213ENST00000480227 GJB5O95377 273 aa17.1■□□□□ 0.33
PKD1-213ENST00000480227 ZDHHC11BP0C7U3 371 aa17.1■□□□□ 0.33
PKD1-213ENST00000480227 ZNF37AP17032 561 aaPredicted RBP17.1■□□□□ 0.33
PKD1-213ENST00000480227 RPL17P18621 184 aaKnown RBP17.1■□□□□ 0.33
PKD1-213ENST00000480227 PMLP29590 882 aa17.1■□□□□ 0.33
PKD1-213ENST00000480227 HERVK_113P63132 956 aa17.1■□□□□ 0.33
PKD1-213ENST00000480227 SH3BP2P78314 561 aa17.1■□□□□ 0.33
PKD1-213ENST00000480227 MAPRE2Q15555 327 aa17.1■□□□□ 0.33
PKD1-213ENST00000480227 PFKFB4Q16877 469 aa17.1■□□□□ 0.33
PKD1-213ENST00000480227 LIN52Q52LA3 116 aa17.1■□□□□ 0.33
PKD1-213ENST00000480227 FBXO48Q5FWF7 155 aa17.1■□□□□ 0.33
PKD1-213ENST00000480227 IL23RQ5VWK5 629 aa17.1■□□□□ 0.33
PKD1-213ENST00000480227 MRNIPQ6NTE8 343 aa17.1■□□□□ 0.33
PKD1-213ENST00000480227 PTGR2Q8N8N7 351 aaPredicted RBP17.1■□□□□ 0.33
PKD1-213ENST00000480227 BCL7CQ8WUZ0 217 aaPredicted RBP17.1■□□□□ 0.33
PKD1-213ENST00000480227 DLG3Q92796 817 aa17.1■□□□□ 0.33
PKD1-213ENST00000480227 ASB9Q96DX5 294 aa17.1■□□□□ 0.33
PKD1-213ENST00000480227 L3HYPDHQ96EM0 354 aa17.1■□□□□ 0.33
PKD1-213ENST00000480227 C19orf60Q96EN9 201 aa17.1■□□□□ 0.33
PKD1-213ENST00000480227 SPATA17Q96L03 361 aa17.1■□□□□ 0.33
PKD1-213ENST00000480227 SLC39A3Q9BRY0 314 aa17.1■□□□□ 0.33
PKD1-213ENST00000480227 ERVK-6Q9BXR3 956 aa17.1■□□□□ 0.33
PKD1-213ENST00000480227 EPS15L1Q9UBC2 864 aa17.1■□□□□ 0.33
PKD1-213ENST00000480227 GIMAP2Q9UG22 337 aa17.1■□□□□ 0.33
PKD1-213ENST00000480227 UBA6A0AVT1 1052 aaPredicted RBP17.1■□□□□ 0.33
PKD1-213ENST00000480227 SLC38A8A6NNN8 435 aa17.1■□□□□ 0.33
PKD1-213ENST00000480227 RNASEH2AO75792 299 aaKnown RBP17.1■□□□□ 0.33
PKD1-213ENST00000480227 CRTAMO95727 393 aa17.1■□□□□ 0.33
PKD1-213ENST00000480227 SCNN1BP51168 640 aa17.1■□□□□ 0.33
PKD1-213ENST00000480227 INHBCP55103 352 aa17.1■□□□□ 0.33
PKD1-213ENST00000480227 GNA12Q03113 381 aa17.1■□□□□ 0.33
PKD1-213ENST00000480227 GALNT1Q10472 559 aaPredicted RBP17.1■□□□□ 0.33
PKD1-213ENST00000480227 TRIM25Q14258 630 aaKnown RBP17.1■□□□□ 0.33
PKD1-213ENST00000480227 GRM2Q14416 872 aa17.1■□□□□ 0.33
PKD1-213ENST00000480227 TCTN1Q2MV58 587 aa17.1■□□□□ 0.33
PKD1-213ENST00000480227 NSUN5Q96P11 429 aaKnown RBP17.1■□□□□ 0.33
PKD1-213ENST00000480227 CENPKQ9BS16 269 aa17.1■□□□□ 0.33
PKD1-213ENST00000480227 UNC93B1Q9H1C4 597 aa17.1■□□□□ 0.33
PKD1-213ENST00000480227 UBAP1Q9NZ09 502 aa17.1■□□□□ 0.33
PKD1-213ENST00000480227 SCN5AQ14524 2016 aa17.09■□□□□ 0.33
PKD1-213ENST00000480227 PRSS51A0A1B0GVH4 220 aa17.09■□□□□ 0.33
PKD1-213ENST00000480227 PRORSD1PA6NEY8 169 aa17.09■□□□□ 0.33
PKD1-213ENST00000480227 MOXD2PA6NHM9 499 aa17.09■□□□□ 0.33
PKD1-213ENST00000480227 MRASO14807 208 aa17.09■□□□□ 0.33
PKD1-213ENST00000480227 TBC1D4O60343 1298 aa17.09■□□□□ 0.33
PKD1-213ENST00000480227 SLC26A3P40879 764 aa17.09■□□□□ 0.33
PKD1-213ENST00000480227 SGSHP51688 502 aa17.09■□□□□ 0.33
PKD1-213ENST00000480227 GK3PQ14409 553 aa17.09■□□□□ 0.33
PKD1-213ENST00000480227 LARP4Q71RC2 724 aaKnown RBP eCLIP17.09■□□□□ 0.33
PKD1-213ENST00000480227 DENND1CQ8IV53 801 aa17.09■□□□□ 0.33
PKD1-213ENST00000480227 CDKN2AIPNLQ96HQ2 116 aa17.09■□□□□ 0.33
PKD1-213ENST00000480227 CNBD2Q96M20 576 aa17.09■□□□□ 0.33
PKD1-213ENST00000480227 TRIB3Q96RU7 358 aa17.09■□□□□ 0.33
PKD1-213ENST00000480227 TRMOQ9BU70 441 aa17.09■□□□□ 0.33
PKD1-213ENST00000480227 NACA2Q9H009 215 aa17.09■□□□□ 0.33
PKD1-213ENST00000480227 SEMA6AQ9H2E6 1030 aa17.09■□□□□ 0.33
PKD1-213ENST00000480227 MID1IP1Q9NPA3 183 aa17.09■□□□□ 0.33
PKD1-213ENST00000480227 FAM50BQ9Y247 325 aa17.09■□□□□ 0.33
PKD1-213ENST00000480227 DNAJC15Q9Y5T4 150 aa17.09■□□□□ 0.33
PKD1-213ENST00000480227 ACSL4O60488 711 aa17.09■□□□□ 0.33
PKD1-213ENST00000480227 AOC2O75106 756 aa17.09■□□□□ 0.33
PKD1-213ENST00000480227 ALDOCP09972 364 aaKnown RBP17.09■□□□□ 0.33
PKD1-213ENST00000480227 STC1P52823 247 aa17.09■□□□□ 0.33
PKD1-213ENST00000480227 FOXA1P55317 472 aa17.09■□□□□ 0.33
PKD1-213ENST00000480227 CYP2R1Q6VVX0 501 aa17.09■□□□□ 0.33
PKD1-213ENST00000480227 RMDN1Q96DB5 314 aa17.09■□□□□ 0.33
PKD1-213ENST00000480227 PRICKLE1Q96MT3 831 aaPredicted RBP17.09■□□□□ 0.33
PKD1-213ENST00000480227 ZBED2Q9BTP6 218 aa17.09■□□□□ 0.33
PKD1-213ENST00000480227 SPAG4Q9NPE6 437 aa17.09■□□□□ 0.33
PKD1-213ENST00000480227 AP4B1Q9Y6B7 739 aa17.09■□□□□ 0.33
PKD1-213ENST00000480227 DENRO43583 198 aaKnown RBP17.08■□□□□ 0.33
PKD1-213ENST00000480227 NRP2O60462 931 aa17.08■□□□□ 0.33
PKD1-213ENST00000480227 CSPG5O95196 566 aa17.08■□□□□ 0.33
PKD1-213ENST00000480227 PGM3O95394 542 aa17.08■□□□□ 0.33
PKD1-213ENST00000480227 NDST3O95803 873 aa17.08■□□□□ 0.33
PKD1-213ENST00000480227 EPOP01588 193 aa17.08■□□□□ 0.33
PKD1-213ENST00000480227 MTHFD2P13995 350 aa17.08■□□□□ 0.33
PKD1-213ENST00000480227 CDKN1CP49918 316 aaPredicted RBP17.08■□□□□ 0.33
PKD1-213ENST00000480227 PTPRRQ15256 657 aa17.08■□□□□ 0.33
PKD1-213ENST00000480227 KIF19Q2TAC6 998 aa17.08■□□□□ 0.33
PKD1-213ENST00000480227 UGT3A2Q3SY77 523 aa17.08■□□□□ 0.33
PKD1-213ENST00000480227 PITRM1Q5JRX3 1037 aa17.08■□□□□ 0.33
PKD1-213ENST00000480227 C6orf52Q5T4I8 152 aa17.08■□□□□ 0.33
PKD1-213ENST00000480227 CLYBLQ8N0X4 340 aa17.08■□□□□ 0.33
PKD1-213ENST00000480227 ADCY4Q8NFM4 1077 aa17.08■□□□□ 0.33
PKD1-213ENST00000480227 OR4K2Q8NGD2 314 aa17.08■□□□□ 0.33
PKD1-213ENST00000480227 GPR150Q8NGU9 434 aa17.08■□□□□ 0.33
PKD1-213ENST00000480227 ZNF512Q96ME7 567 aaPredicted RBP17.08■□□□□ 0.33
PKD1-213ENST00000480227 KCNA7Q96RP8 456 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms