RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 PAFAH1B3Q15102 231 aaKnown RBP6.27□□□□□ -1.41
SF3B1-209ENST00000479532 GEN1Q17RS7 908 aa6.27□□□□□ -1.41
SF3B1-209ENST00000479532 GAB4Q2WGN9 574 aa6.27□□□□□ -1.41
SF3B1-209ENST00000479532 FUT11Q495W5 492 aa6.27□□□□□ -1.41
SF3B1-209ENST00000479532 ATP13A4Q4VNC1 1196 aa6.27□□□□□ -1.41
SF3B1-209ENST00000479532 FSCBQ5H9T9 825 aa6.27□□□□□ -1.41
SF3B1-209ENST00000479532 KAZNQ674X7 775 aa6.27□□□□□ -1.41
SF3B1-209ENST00000479532 FSTL4Q6MZW2 842 aa6.27□□□□□ -1.41
SF3B1-209ENST00000479532 CXorf57Q6NSI4 855 aaKnown RBP6.27□□□□□ -1.41
SF3B1-209ENST00000479532 TIGD7Q6NT04 549 aaPredicted RBP6.27□□□□□ -1.41
SF3B1-209ENST00000479532 CRTC3Q6UUV7 619 aa6.27□□□□□ -1.41
SF3B1-209ENST00000479532 SERPINA13PQ6UXR4 307 aa6.27□□□□□ -1.41
SF3B1-209ENST00000479532 DBX2Q6ZNG2 339 aa6.27□□□□□ -1.41
SF3B1-209ENST00000479532 SYDE1Q6ZW31 735 aaPredicted RBP6.27□□□□□ -1.41
SF3B1-209ENST00000479532 BMP8AQ7Z5Y6 402 aa6.27□□□□□ -1.41
SF3B1-209ENST00000479532 NLRP14Q86W24 1093 aa6.27□□□□□ -1.41
SF3B1-209ENST00000479532 ZSWIM9Q86XI8 627 aa6.27□□□□□ -1.41
SF3B1-209ENST00000479532 CPNE8Q86YQ8 564 aa6.27□□□□□ -1.41
SF3B1-209ENST00000479532 CHPFQ8IZ52 775 aa6.27□□□□□ -1.41
SF3B1-209ENST00000479532 UMODL1-AS1Q8N2C9 162 aa6.27□□□□□ -1.41
SF3B1-209ENST00000479532 ATPAF2Q8N5M1 289 aa6.27□□□□□ -1.41
SF3B1-209ENST00000479532 FAM181AQ8N9Y4 354 aa6.27□□□□□ -1.41
SF3B1-209ENST00000479532 KDM1BQ8NB78 822 aa6.27□□□□□ -1.41
SF3B1-209ENST00000479532 LSM14AQ8ND56 463 aaKnown RBP6.27□□□□□ -1.41
SF3B1-209ENST00000479532 RPLP0P6Q8NHW5 317 aa6.27□□□□□ -1.41
SF3B1-209ENST00000479532 WFDC5Q8TCV5 224 aa6.27□□□□□ -1.41
SF3B1-209ENST00000479532 MIPOL1Q8TD10 442 aa6.27□□□□□ -1.41
SF3B1-209ENST00000479532 CCHCR1Q8TD31 782 aa6.27□□□□□ -1.41
SF3B1-209ENST00000479532 MAIP1Q8WWC4 291 aa6.27□□□□□ -1.41
SF3B1-209ENST00000479532 CASKIN2Q8WXE0 1202 aa6.27□□□□□ -1.41
SF3B1-209ENST00000479532 RAPGEF5Q92565 580 aa6.27□□□□□ -1.41
SF3B1-209ENST00000479532 KRT35Q92764 455 aa6.27□□□□□ -1.41
SF3B1-209ENST00000479532 ARHGEF2Q92974 986 aaKnown RBP6.27□□□□□ -1.41
SF3B1-209ENST00000479532 NINJ1Q92982 152 aa6.27□□□□□ -1.41
SF3B1-209ENST00000479532 TTC17Q96AE7 1141 aa6.27□□□□□ -1.41
SF3B1-209ENST00000479532 HAUS1Q96CS2 278 aa6.27□□□□□ -1.41
SF3B1-209ENST00000479532 FAF2Q96CS3 445 aa6.27□□□□□ -1.41
SF3B1-209ENST00000479532 MFSD3Q96ES6 412 aa6.27□□□□□ -1.41
SF3B1-209ENST00000479532 MYEOVQ96EZ4 313 aa6.27□□□□□ -1.41
SF3B1-209ENST00000479532 HES6Q96HZ4 224 aa6.27□□□□□ -1.41
SF3B1-209ENST00000479532 CCDC114Q96M63 670 aa6.27□□□□□ -1.41
SF3B1-209ENST00000479532 FEM1AQ9BSK4 669 aa6.27□□□□□ -1.41
SF3B1-209ENST00000479532 HDAC8Q9BY41 377 aa6.27□□□□□ -1.41
SF3B1-209ENST00000479532 ACTR5Q9H9F9 607 aaPredicted RBP6.27□□□□□ -1.41
SF3B1-209ENST00000479532 SP110Q9HB58 689 aa6.27□□□□□ -1.41
SF3B1-209ENST00000479532 SUN2Q9UH99 717 aa6.27□□□□□ -1.41
SF3B1-209ENST00000479532 ITGB1BP2Q9UKP3 347 aa6.27□□□□□ -1.41
SF3B1-209ENST00000479532 PACSIN2Q9UNF0 486 aaPredicted RBP6.27□□□□□ -1.41
SF3B1-209ENST00000479532 hCG_1818297A0A087WSY0 165 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 BLACEA4D250 179 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 CTAGE9A4FU28 777 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 PRRT4C9JH25 899 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 K7EQS6 105 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 CBX4O00257 560 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 KCNK3O14649 394 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 TRIM24O15164 1050 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 KDELR3O43731 214 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 CST8O60676 142 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 RNASEH1O60930 286 aaKnown RBP6.26□□□□□ -1.41
SF3B1-209ENST00000479532 RFPL3O75679 317 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 ALDH1A2O94788 518 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 KLF8O95600 359 aaPredicted RBP6.26□□□□□ -1.41
SF3B1-209ENST00000479532 GSNP06396 782 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 CD48P09326 243 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 CD8BP10966 210 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 CHRNB1P11230 501 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 HNRNPLP14866 589 aaKnown RBP eCLIP6.26□□□□□ -1.41
SF3B1-209ENST00000479532 AOC1P19801 751 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 PAX7P23759 505 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 NTSR1P30989 418 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 HOXC12P31275 282 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 PTPN7P35236 360 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 ECI1P42126 302 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 CDKN2BP42772 138 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 RECQLP46063 649 aaPredicted RBP6.26□□□□□ -1.41
SF3B1-209ENST00000479532 NR2C2P49116 596 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 PEX5P50542 639 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 CCR3P51677 355 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 DYNLT1P63172 113 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 ZNF234Q14588 700 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 RFTN1Q14699 578 aaPredicted RBP6.26□□□□□ -1.41
SF3B1-209ENST00000479532 ZRSR2Q15696 482 aaKnown RBP6.26□□□□□ -1.41
SF3B1-209ENST00000479532 KCNMB1Q16558 191 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 ACCSLQ4AC99 568 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 TMEM31Q5JXX7 168 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 BEND6Q5SZJ8 279 aaPredicted RBP6.26□□□□□ -1.41
SF3B1-209ENST00000479532 C1QTNF12Q5T7M4 302 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 NAIF1Q69YI7 327 aaPredicted RBP6.26□□□□□ -1.41
SF3B1-209ENST00000479532 NCBP2-AS2Q69YL0 99 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 CWF19L1Q69YN2 538 aaKnown RBP6.26□□□□□ -1.41
SF3B1-209ENST00000479532 SLC9A4Q6AI14 798 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 WDR93Q6P2C0 686 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 MFSD7Q6UXD7 560 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 DSG4Q86SJ6 1040 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 ADIPOR2Q86V24 386 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 CCDC105Q8IYK2 499 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 APCDD1Q8J025 514 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 SLC35F6Q8N357 371 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 ATP11CQ8NB49 1132 aa6.26□□□□□ -1.41
SF3B1-209ENST00000479532 TMEM145Q8NBT3 493 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms