RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 CNTN6Q9UQ52 1028 aa13.17□□□□□ -0.3
CNKSR3-204ENST00000479339 UGT2A1Q9Y4X1 527 aa13.17□□□□□ -0.3
CNKSR3-204ENST00000479339 CHMP2AO43633 222 aa13.17□□□□□ -0.3
CNKSR3-204ENST00000479339 TRIM13O60858 407 aa13.17□□□□□ -0.3
CNKSR3-204ENST00000479339 PTTG1O95997 202 aa13.17□□□□□ -0.3
CNKSR3-204ENST00000479339 ACO1P21399 889 aaKnown RBP13.17□□□□□ -0.3
CNKSR3-204ENST00000479339 IL10P22301 178 aa13.17□□□□□ -0.3
CNKSR3-204ENST00000479339 PPP5CP53041 499 aa13.17□□□□□ -0.3
CNKSR3-204ENST00000479339 OGDHQ02218 1023 aa13.17□□□□□ -0.3
CNKSR3-204ENST00000479339 VAC14Q08AM6 782 aa13.17□□□□□ -0.3
CNKSR3-204ENST00000479339 NIPAL4Q0D2K0 466 aa13.17□□□□□ -0.3
CNKSR3-204ENST00000479339 XAF1Q6GPH4 301 aa13.17□□□□□ -0.3
CNKSR3-204ENST00000479339 TRMT10BQ6PF06 316 aaKnown RBP13.17□□□□□ -0.3
CNKSR3-204ENST00000479339 HACD2Q6Y1H2 254 aa13.17□□□□□ -0.3
CNKSR3-204ENST00000479339 C15orf39Q6ZRI6 1047 aa13.17□□□□□ -0.3
CNKSR3-204ENST00000479339 PTAR1Q7Z6K3 402 aaPredicted RBP13.17□□□□□ -0.3
CNKSR3-204ENST00000479339 SLCO6A1Q86UG4 719 aa13.17□□□□□ -0.3
CNKSR3-204ENST00000479339 SCML4Q8N228 414 aa13.17□□□□□ -0.3
CNKSR3-204ENST00000479339 SLC4A11Q8NBS3 891 aa13.17□□□□□ -0.3
CNKSR3-204ENST00000479339 FBXO22Q8NEZ5 403 aa13.17□□□□□ -0.3
CNKSR3-204ENST00000479339 PHF10Q8WUB8 498 aaKnown RBP13.17□□□□□ -0.3
CNKSR3-204ENST00000479339 FKBP10Q96AY3 582 aa13.17□□□□□ -0.3
CNKSR3-204ENST00000479339 NPAS2Q99743 824 aa13.17□□□□□ -0.3
CNKSR3-204ENST00000479339 ZNF518BQ9C0D4 1074 aa13.17□□□□□ -0.3
CNKSR3-204ENST00000479339 PCDHAC1Q9H158 963 aa13.17□□□□□ -0.3
CNKSR3-204ENST00000479339 CDHR5Q9HBB8 845 aa13.17□□□□□ -0.3
CNKSR3-204ENST00000479339 TMEM216Q9P0N5 145 aa13.17□□□□□ -0.3
CNKSR3-204ENST00000479339 ADAM28Q9UKQ2 775 aa13.17□□□□□ -0.3
CNKSR3-204ENST00000479339 COL4A4P53420 1690 aaPredicted RBP13.16□□□□□ -0.3
CNKSR3-204ENST00000479339 CHD7Q9P2D1 2997 aa13.16□□□□□ -0.3
CNKSR3-204ENST00000479339 ZSCAN5BA6NJL1 495 aa13.16□□□□□ -0.3
CNKSR3-204ENST00000479339 E7ENX8 843 aa13.16□□□□□ -0.3
CNKSR3-204ENST00000479339 ZBTB39O15060 712 aa13.16□□□□□ -0.3
CNKSR3-204ENST00000479339 GPR32O75388 356 aa13.16□□□□□ -0.3
CNKSR3-204ENST00000479339 TPSB2P20231 275 aa13.16□□□□□ -0.3
CNKSR3-204ENST00000479339 IMPDH1P20839 514 aa13.16□□□□□ -0.3
CNKSR3-204ENST00000479339 ARCN1P48444 511 aaKnown RBP13.16□□□□□ -0.3
CNKSR3-204ENST00000479339 CRYBB1P53674 252 aaPredicted RBP13.16□□□□□ -0.3
CNKSR3-204ENST00000479339 PLA2G16P53816 162 aa13.16□□□□□ -0.3
CNKSR3-204ENST00000479339 CTAG1AP78358 180 aa13.16□□□□□ -0.3
CNKSR3-204ENST00000479339 PRKAA1Q13131 559 aa13.16□□□□□ -0.3
CNKSR3-204ENST00000479339 TFDP2Q14188 446 aa13.16□□□□□ -0.3
CNKSR3-204ENST00000479339 SKIV2LQ15477 1246 aaKnown RBP13.16□□□□□ -0.3
CNKSR3-204ENST00000479339 TARBP2Q15633 366 aaKnown RBP13.16□□□□□ -0.3
CNKSR3-204ENST00000479339 TPSAB1Q15661 275 aa13.16□□□□□ -0.3
CNKSR3-204ENST00000479339 ZNF181Q2M3W8 571 aa13.16□□□□□ -0.3
CNKSR3-204ENST00000479339 TJAP1Q5JTD0 557 aa13.16□□□□□ -0.3
CNKSR3-204ENST00000479339 TBCELQ5QJ74 424 aa13.16□□□□□ -0.3
CNKSR3-204ENST00000479339 RSBN1Q5VWQ0 802 aaPredicted RBP13.16□□□□□ -0.3
CNKSR3-204ENST00000479339 TUBA3EQ6PEY2 450 aa13.16□□□□□ -0.3
CNKSR3-204ENST00000479339 ZNF598Q86UK7 904 aaKnown RBP13.16□□□□□ -0.3
CNKSR3-204ENST00000479339 NPAS4Q8IUM7 802 aa13.16□□□□□ -0.3
CNKSR3-204ENST00000479339 CRIPAKQ8N1N5 446 aa13.16□□□□□ -0.3
CNKSR3-204ENST00000479339 OR6Q1Q8NGQ2 317 aa13.16□□□□□ -0.3
CNKSR3-204ENST00000479339 ZFP90Q8TF47 636 aa13.16□□□□□ -0.3
CNKSR3-204ENST00000479339 ISL2Q96A47 359 aa13.16□□□□□ -0.3
CNKSR3-204ENST00000479339 ZNF689Q96CS4 500 aaPredicted RBP13.16□□□□□ -0.3
CNKSR3-204ENST00000479339 FBXL20Q96IG2 436 aa13.16□□□□□ -0.3
CNKSR3-204ENST00000479339 SIGLEC10Q96LC7 697 aa13.16□□□□□ -0.3
CNKSR3-204ENST00000479339 NIFKQ9BYG3 293 aaKnown RBP13.16□□□□□ -0.3
CNKSR3-204ENST00000479339 SLA2Q9H6Q3 261 aa13.16□□□□□ -0.3
CNKSR3-204ENST00000479339 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.16□□□□□ -0.3
CNKSR3-204ENST00000479339 RBAKQ9NYW8 714 aaPredicted RBP13.16□□□□□ -0.3
CNKSR3-204ENST00000479339 ZNF221Q9UK13 617 aa13.16□□□□□ -0.3
CNKSR3-204ENST00000479339 STBD1O95210 358 aa13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 APOA4P06727 396 aa13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 EEF1B2P24534 225 aaKnown RBP13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 TBXAS1P24557 533 aaPredicted RBP13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 IL12AP29459 219 aa13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 S100A5P33763 92 aa13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 NKX2-5P52952 324 aaPredicted RBP13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 MAPK10P53779 464 aa13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 GABARAPL2P60520 117 aa13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 EIF2B5Q13144 721 aaKnown RBP13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 AQP6Q13520 282 aa13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 CDK10Q15131 360 aa13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 XKR3Q5GH77 459 aa13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 CEP78Q5JTW2 689 aa13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 FAM45BPQ6NSW5 357 aa13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 CCDC28AQ8IWP9 274 aa13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 FAM45AQ8TCE6 357 aa13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 POMGNT1Q8WZA1 660 aa13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 LXNQ9BS40 222 aa13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 MTMR12Q9C0I1 747 aa13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 MUC3BQ9H195 1237 aa13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 WDR55Q9H6Y2 383 aaPredicted RBP13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 KCNN3Q9UGI6 736 aa13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 PCDHB4Q9Y5E5 795 aa13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 COPG1Q9Y678 874 aaKnown RBP13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 FAM25AB3EWG3 89 aa13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 FAM25CB3EWG5 89 aa13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 FAM25GB3EWG6 89 aa13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 NEMP1O14524 444 aa13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 MTSS1O43312 755 aa13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 SYNCRIPO60506 623 aaKnown RBP13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 BMP4P12644 408 aa13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 PSMA2P25787 234 aa13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 POLR2IP36954 125 aaKnown RBP13.15□□□□□ -0.3
CNKSR3-204ENST00000479339 MAGEA12P43365 314 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms