RNA–Protein interactions for RNA: ENST00000479307.5

RFC4-212, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,043 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-212ENST00000479307 RYKP34925 604 aa5.19□□□□□ -1.58
RFC4-212ENST00000479307 RFC1P35251 1148 aaPredicted RBP5.19□□□□□ -1.58
RFC4-212ENST00000479307 MMP13P45452 471 aa5.19□□□□□ -1.58
RFC4-212ENST00000479307 ARF3P61204 181 aaPredicted RBP5.19□□□□□ -1.58
RFC4-212ENST00000479307 RPS3AP61247 264 aaKnown RBP5.19□□□□□ -1.58
RFC4-212ENST00000479307 ARF1P84077 181 aaKnown RBP5.19□□□□□ -1.58
RFC4-212ENST00000479307 DCTN2Q13561 401 aaKnown RBP5.19□□□□□ -1.58
RFC4-212ENST00000479307 CCNG2Q16589 344 aa5.19□□□□□ -1.58
RFC4-212ENST00000479307 MTX3Q5HYI7 312 aa5.19□□□□□ -1.58
RFC4-212ENST00000479307 SNX30Q5VWJ9 437 aa5.19□□□□□ -1.58
RFC4-212ENST00000479307 SHC4Q6S5L8 630 aa5.19□□□□□ -1.58
RFC4-212ENST00000479307 TRAPPC11Q7Z392 1133 aa5.19□□□□□ -1.58
RFC4-212ENST00000479307 PXKQ7Z7A4 578 aa5.19□□□□□ -1.58
RFC4-212ENST00000479307 TBC1D26Q86UD7 250 aa5.19□□□□□ -1.58
RFC4-212ENST00000479307 FAM217AQ8IXS0 508 aa5.19□□□□□ -1.58
RFC4-212ENST00000479307 CADM3Q8N126 398 aa5.19□□□□□ -1.58
RFC4-212ENST00000479307 ARFGAP1Q8N6T3 406 aa5.19□□□□□ -1.58
RFC4-212ENST00000479307 MCPH1Q8NEM0 835 aa5.19□□□□□ -1.58
RFC4-212ENST00000479307 FAM149B1Q96BN6 582 aa5.19□□□□□ -1.58
RFC4-212ENST00000479307 MSI2Q96DH6 328 aaKnown RBP5.19□□□□□ -1.58
RFC4-212ENST00000479307 FAM122AQ96E09 287 aa5.19□□□□□ -1.58
RFC4-212ENST00000479307 MUC13Q9H3R2 512 aa5.19□□□□□ -1.58
RFC4-212ENST00000479307 PLEKHA5Q9HAU0 1116 aa5.19□□□□□ -1.58
RFC4-212ENST00000479307 FZD3Q9NPG1 666 aa5.19□□□□□ -1.58
RFC4-212ENST00000479307 TRNAU1APQ9NX07 287 aaKnown RBP5.19□□□□□ -1.58
RFC4-212ENST00000479307 SWAP70Q9UH65 585 aa5.19□□□□□ -1.58
RFC4-212ENST00000479307 CARD8Q9Y2G2 431 aa5.19□□□□□ -1.58
RFC4-212ENST00000479307 ZNF609O15014 1411 aa5.19□□□□□ -1.58
RFC4-212ENST00000479307 LRRC53A6NM62 1247 aa5.18□□□□□ -1.58
RFC4-212ENST00000479307 TGFB1I1O43294 461 aa5.18□□□□□ -1.58
RFC4-212ENST00000479307 RNASEH2AO75792 299 aaKnown RBP5.18□□□□□ -1.58
RFC4-212ENST00000479307 SPARCP09486 303 aa5.18□□□□□ -1.58
RFC4-212ENST00000479307 CHRNB1P11230 501 aa5.18□□□□□ -1.58
RFC4-212ENST00000479307 RGS2P41220 211 aa5.18□□□□□ -1.58
RFC4-212ENST00000479307 EFNA5P52803 228 aa5.18□□□□□ -1.58
RFC4-212ENST00000479307 MAMLD1Q13495 774 aa5.18□□□□□ -1.58
RFC4-212ENST00000479307 RUNX2Q13950 521 aa5.18□□□□□ -1.58
RFC4-212ENST00000479307 RNPS1Q15287 305 aaKnown RBP5.18□□□□□ -1.58
RFC4-212ENST00000479307 PLEKHO1Q53GL0 409 aaPredicted RBP5.18□□□□□ -1.58
RFC4-212ENST00000479307 HEPHL1Q6MZM0 1159 aa5.18□□□□□ -1.58
RFC4-212ENST00000479307 CPLX2Q6PUV4 134 aaKnown RBP5.18□□□□□ -1.58
RFC4-212ENST00000479307 OLFM4Q6UX06 510 aa5.18□□□□□ -1.58
RFC4-212ENST00000479307 MRPL10Q7Z7H8 261 aaKnown RBP5.18□□□□□ -1.58
RFC4-212ENST00000479307 HORMAD2Q8N7B1 307 aa5.18□□□□□ -1.58
RFC4-212ENST00000479307 CNBD1Q8NA66 436 aa5.18□□□□□ -1.58
RFC4-212ENST00000479307 RASSF8Q8NHQ8 419 aa5.18□□□□□ -1.58
RFC4-212ENST00000479307 TMEM163Q8TC26 289 aa5.18□□□□□ -1.58
RFC4-212ENST00000479307 UBE2Q2Q8WVN8 375 aa5.18□□□□□ -1.58
RFC4-212ENST00000479307 OTULINQ96BN8 352 aa5.18□□□□□ -1.58
RFC4-212ENST00000479307 PIP5K1AQ99755 562 aa5.18□□□□□ -1.58
RFC4-212ENST00000479307 HEMGNQ9BXL5 484 aa5.18□□□□□ -1.58
RFC4-212ENST00000479307 KLHL31Q9H511 634 aa5.18□□□□□ -1.58
RFC4-212ENST00000479307 MAP6D1Q9H9H5 199 aa5.18□□□□□ -1.58
RFC4-212ENST00000479307 PCDHB16Q9NRJ7 776 aa5.18□□□□□ -1.58
RFC4-212ENST00000479307 PLEKHB1Q9UF11 243 aaPredicted RBP5.18□□□□□ -1.58
RFC4-212ENST00000479307 PSAT1Q9Y617 370 aa5.18□□□□□ -1.58
RFC4-212ENST00000479307 HS3ST3B1Q9Y662 390 aa5.18□□□□□ -1.58
RFC4-212ENST00000479307 SCINQ9Y6U3 715 aa5.18□□□□□ -1.58
RFC4-212ENST00000479307 ZNF646O15015 1829 aaPredicted RBP5.18□□□□□ -1.58
RFC4-212ENST00000479307 FSD2A1L4K1 749 aa5.17□□□□□ -1.58
RFC4-212ENST00000479307 USP17L23D6RBM5 183 aa5.17□□□□□ -1.58
RFC4-212ENST00000479307 OVOL3O00110 214 aa5.17□□□□□ -1.58
RFC4-212ENST00000479307 SLC25A17O43808 307 aa5.17□□□□□ -1.58
RFC4-212ENST00000479307 HSP90AB1P08238 724 aaKnown RBP5.17□□□□□ -1.58
RFC4-212ENST00000479307 CDH2P19022 906 aaPredicted RBP5.17□□□□□ -1.58
RFC4-212ENST00000479307 RASSF2P50749 326 aa5.17□□□□□ -1.58
RFC4-212ENST00000479307 C21orf58P58505 322 aa5.17□□□□□ -1.58
RFC4-212ENST00000479307 OLR1P78380 273 aa5.17□□□□□ -1.58
RFC4-212ENST00000479307 GOLGA8DPQ0D2H9 430 aa5.17□□□□□ -1.58
RFC4-212ENST00000479307 PRKG2Q13237 762 aa5.17□□□□□ -1.58
RFC4-212ENST00000479307 PDE1CQ14123 709 aaPredicted RBP5.17□□□□□ -1.58
RFC4-212ENST00000479307 RBMS2Q15434 407 aaKnown RBP5.17□□□□□ -1.58
RFC4-212ENST00000479307 Q5PR19 223 aa5.17□□□□□ -1.58
RFC4-212ENST00000479307 PXDC1Q5TGL8 231 aa5.17□□□□□ -1.58
RFC4-212ENST00000479307 SPATA1Q5VX52 437 aa5.17□□□□□ -1.58
RFC4-212ENST00000479307 KLHL24Q6TFL4 600 aa5.17□□□□□ -1.58
RFC4-212ENST00000479307 PIP4P1Q86T03 277 aa5.17□□□□□ -1.58
RFC4-212ENST00000479307 DENND6AQ8IWF6 608 aa5.17□□□□□ -1.58
RFC4-212ENST00000479307 KIAA2013Q8IYS2 634 aa5.17□□□□□ -1.58
RFC4-212ENST00000479307 RBFAQ8N0V3 343 aa5.17□□□□□ -1.58
RFC4-212ENST00000479307 KCNG4Q8TDN1 519 aa5.17□□□□□ -1.58
RFC4-212ENST00000479307 TMEM174Q8WUU8 243 aa5.17□□□□□ -1.58
RFC4-212ENST00000479307 SMARCE1Q969G3 411 aa5.17□□□□□ -1.58
RFC4-212ENST00000479307 INTS12Q96CB8 462 aaKnown RBP5.17□□□□□ -1.58
RFC4-212ENST00000479307 MAP7D2Q96T17 732 aa5.17□□□□□ -1.58
RFC4-212ENST00000479307 TMEM79Q9BSE2 394 aa5.17□□□□□ -1.58
RFC4-212ENST00000479307 STRA6Q9BX79 667 aa5.17□□□□□ -1.58
RFC4-212ENST00000479307 CDT1Q9H211 546 aa5.17□□□□□ -1.58
RFC4-212ENST00000479307 MVB12BQ9H7P6 319 aa5.17□□□□□ -1.58
RFC4-212ENST00000479307 ANKRD10Q9NXR5 420 aa5.17□□□□□ -1.58
RFC4-212ENST00000479307 TERF2IPQ9NYB0 399 aa5.17□□□□□ -1.58
RFC4-212ENST00000479307 LIMA1Q9UHB6 759 aaKnown RBP5.17□□□□□ -1.58
RFC4-212ENST00000479307 COG5Q9UP83 839 aa5.17□□□□□ -1.58
RFC4-212ENST00000479307 PIAS3Q9Y6X2 628 aa5.17□□□□□ -1.58
RFC4-212ENST00000479307 TYW5A2RUC4 315 aaKnown RBP5.16□□□□□ -1.58
RFC4-212ENST00000479307 STMND1H3BQB6 276 aa5.16□□□□□ -1.58
RFC4-212ENST00000479307 TIPRLO75663 272 aa5.16□□□□□ -1.58
RFC4-212ENST00000479307 MT-CYBP00156 380 aaPredicted RBP5.16□□□□□ -1.58
RFC4-212ENST00000479307 TFP02787 698 aa5.16□□□□□ -1.58
RFC4-212ENST00000479307 CYP19A1P11511 503 aaPredicted RBP5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms