RNA–Protein interactions for RNA: ENST00000478911.1

SUPT20H-215, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 3

Gene SUPT20H, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-215ENST00000478911 TMCC2O75069 709 aa3.39□□□□□ -1.87
SUPT20H-215ENST00000478911 VNN2O95498 520 aa3.39□□□□□ -1.87
SUPT20H-215ENST00000478911 TMEM11P17152 192 aa3.39□□□□□ -1.87
SUPT20H-215ENST00000478911 GCH1P30793 250 aa3.39□□□□□ -1.87
SUPT20H-215ENST00000478911 HOXA13P31271 388 aaPredicted RBP3.39□□□□□ -1.87
SUPT20H-215ENST00000478911 HNRNPH1P31943 449 aaKnown RBP3.39□□□□□ -1.87
SUPT20H-215ENST00000478911 EIF2S3P41091 472 aaKnown RBP3.39□□□□□ -1.87
SUPT20H-215ENST00000478911 PIK3CAP42336 1068 aa3.39□□□□□ -1.87
SUPT20H-215ENST00000478911 CAMPP49913 170 aa3.39□□□□□ -1.87
SUPT20H-215ENST00000478911 METAP2P50579 478 aaKnown RBP eCLIP3.39□□□□□ -1.87
SUPT20H-215ENST00000478911 NUDT6P53370 316 aa3.39□□□□□ -1.87
SUPT20H-215ENST00000478911 KRTAP10-6P60371 365 aaPredicted RBP3.39□□□□□ -1.87
SUPT20H-215ENST00000478911 ZBED6P86452 979 aa3.39□□□□□ -1.87
SUPT20H-215ENST00000478911 ROR2Q01974 943 aaKnown RBP3.39□□□□□ -1.87
SUPT20H-215ENST00000478911 EIF2S3LQ2VIR3 472 aaKnown RBP3.39□□□□□ -1.87
SUPT20H-215ENST00000478911 ZSCAN23Q3MJ62 389 aa3.39□□□□□ -1.87
SUPT20H-215ENST00000478911 FSCBQ5H9T9 825 aa3.39□□□□□ -1.87
SUPT20H-215ENST00000478911 FNBP1LQ5T0N5 605 aa3.39□□□□□ -1.87
SUPT20H-215ENST00000478911 PMS2CLQ68D20 193 aa3.39□□□□□ -1.87
SUPT20H-215ENST00000478911 ZNF425Q6IV72 752 aa3.39□□□□□ -1.87
SUPT20H-215ENST00000478911 METTL2BQ6P1Q9 378 aaKnown RBP3.39□□□□□ -1.87
SUPT20H-215ENST00000478911 B3GNT6Q6ZMB0 384 aa3.39□□□□□ -1.87
SUPT20H-215ENST00000478911 DPPA4Q7L190 304 aa3.39□□□□□ -1.87
SUPT20H-215ENST00000478911 GALNT5Q7Z7M9 940 aa3.39□□□□□ -1.87
SUPT20H-215ENST00000478911 TEX11Q8IYF3 940 aa3.39□□□□□ -1.87
SUPT20H-215ENST00000478911 RNF168Q8IYW5 571 aaPredicted RBP3.39□□□□□ -1.87
SUPT20H-215ENST00000478911 SPATA6LQ8N4H0 392 aa3.39□□□□□ -1.87
SUPT20H-215ENST00000478911 NEXN-AS1Q8NBZ9 246 aa3.39□□□□□ -1.87
SUPT20H-215ENST00000478911 HJURPQ8NCD3 748 aaPredicted RBP3.39□□□□□ -1.87
SUPT20H-215ENST00000478911 SCARB1Q8WTV0 552 aa3.39□□□□□ -1.87
SUPT20H-215ENST00000478911 METTL2AQ96IZ6 378 aaKnown RBP3.39□□□□□ -1.87
SUPT20H-215ENST00000478911 FEM1CQ96JP0 617 aa3.39□□□□□ -1.87
SUPT20H-215ENST00000478911 OR2A14Q96R47 310 aa3.39□□□□□ -1.87
SUPT20H-215ENST00000478911 ACOX2Q99424 681 aa3.39□□□□□ -1.87
SUPT20H-215ENST00000478911 SRSF8Q9BRL6 282 aaKnown RBP3.39□□□□□ -1.87
SUPT20H-215ENST00000478911 HAUS8Q9BT25 410 aa3.39□□□□□ -1.87
SUPT20H-215ENST00000478911 MXD3Q9BW11 206 aa3.39□□□□□ -1.87
SUPT20H-215ENST00000478911 KRTAP1-5Q9BYS1 174 aa3.39□□□□□ -1.87
SUPT20H-215ENST00000478911 FAM234AQ9H0X4 552 aa3.39□□□□□ -1.87
SUPT20H-215ENST00000478911 RBM38Q9H0Z9 239 aaKnown RBP3.39□□□□□ -1.87
SUPT20H-215ENST00000478911 NDST4Q9H3R1 872 aa3.39□□□□□ -1.87
SUPT20H-215ENST00000478911 PLK3Q9H4B4 646 aa3.39□□□□□ -1.87
SUPT20H-215ENST00000478911 LTB4R2Q9NPC1 389 aa3.39□□□□□ -1.87
SUPT20H-215ENST00000478911 OGFRQ9NZT2 677 aa3.39□□□□□ -1.87
SUPT20H-215ENST00000478911 SUCLA2Q9P2R7 463 aaPredicted RBP3.39□□□□□ -1.87
SUPT20H-215ENST00000478911 NRBP1Q9UHY1 535 aa3.39□□□□□ -1.87
SUPT20H-215ENST00000478911 FZD10Q9ULW2 581 aa3.39□□□□□ -1.87
SUPT20H-215ENST00000478911 CDC14AQ9UNH5 594 aa3.39□□□□□ -1.87
SUPT20H-215ENST00000478911 SNX8Q9Y5X2 465 aa3.39□□□□□ -1.87
SUPT20H-215ENST00000478911 ZNF521Q96K83 1311 aa3.39□□□□□ -1.87
SUPT20H-215ENST00000478911 C1orf226A1L170 272 aa3.38□□□□□ -1.87
SUPT20H-215ENST00000478911 B4DLN1 442 aa3.38□□□□□ -1.87
SUPT20H-215ENST00000478911 H3BNX3 289 aa3.38□□□□□ -1.87
SUPT20H-215ENST00000478911 ASAP2O43150 1006 aa3.38□□□□□ -1.87
SUPT20H-215ENST00000478911 HS6ST1O60243 411 aa3.38□□□□□ -1.87
SUPT20H-215ENST00000478911 ZIC3O60481 467 aa3.38□□□□□ -1.87
SUPT20H-215ENST00000478911 JRKO75564 520 aa3.38□□□□□ -1.87
SUPT20H-215ENST00000478911 STARD3NLO95772 234 aa3.38□□□□□ -1.87
SUPT20H-215ENST00000478911 HSP90AA1P07900 732 aaKnown RBP3.38□□□□□ -1.87
SUPT20H-215ENST00000478911 SRPRAP08240 638 aaKnown RBP3.38□□□□□ -1.87
SUPT20H-215ENST00000478911 G6PDP11413 515 aa3.38□□□□□ -1.87
SUPT20H-215ENST00000478911 DDX5P17844 614 aaKnown RBP3.38□□□□□ -1.87
SUPT20H-215ENST00000478911 RPL3P39023 403 aaKnown RBP3.38□□□□□ -1.87
SUPT20H-215ENST00000478911 MXI1P50539 228 aa3.38□□□□□ -1.87
SUPT20H-215ENST00000478911 RAD23BP54727 409 aa3.38□□□□□ -1.87
SUPT20H-215ENST00000478911 TAS2R40P59535 323 aa3.38□□□□□ -1.87
SUPT20H-215ENST00000478911 PSMC6P62333 389 aa3.38□□□□□ -1.87
SUPT20H-215ENST00000478911 ABATP80404 500 aa3.38□□□□□ -1.87
SUPT20H-215ENST00000478911 TFAP4Q01664 338 aa3.38□□□□□ -1.87
SUPT20H-215ENST00000478911 NUCB1Q02818 461 aa3.38□□□□□ -1.87
SUPT20H-215ENST00000478911 ACSM2AQ08AH3 577 aa3.38□□□□□ -1.87
SUPT20H-215ENST00000478911 STK4Q13043 487 aa3.38□□□□□ -1.87
SUPT20H-215ENST00000478911 IKQ13123 557 aaPredicted RBP3.38□□□□□ -1.87
SUPT20H-215ENST00000478911 NAB2Q15742 525 aa3.38□□□□□ -1.87
SUPT20H-215ENST00000478911 EFNB3Q15768 340 aa3.38□□□□□ -1.87
SUPT20H-215ENST00000478911 PPP6R3Q5H9R7 873 aaPredicted RBP3.38□□□□□ -1.87
SUPT20H-215ENST00000478911 LRIF1Q5T3J3 769 aa3.38□□□□□ -1.87
SUPT20H-215ENST00000478911 GGNBP1Q5YKI7 109 aa3.38□□□□□ -1.87
SUPT20H-215ENST00000478911 ACSM2BQ68CK6 577 aa3.38□□□□□ -1.87
SUPT20H-215ENST00000478911 TECPR1Q7Z6L1 1165 aa3.38□□□□□ -1.87
SUPT20H-215ENST00000478911 TSPAN33Q86UF1 283 aa3.38□□□□□ -1.87
SUPT20H-215ENST00000478911 TAGAPQ8N103 731 aa3.38□□□□□ -1.87
SUPT20H-215ENST00000478911 C9orf106Q8NAJ2 232 aa3.38□□□□□ -1.87
SUPT20H-215ENST00000478911 C1orf131Q8NDD1 294 aaKnown RBP3.38□□□□□ -1.87
SUPT20H-215ENST00000478911 SNRNP27Q8WVK2 155 aaKnown RBP3.38□□□□□ -1.87
SUPT20H-215ENST00000478911 HMCESQ96FZ2 354 aa3.38□□□□□ -1.87
SUPT20H-215ENST00000478911 HARBI1Q96MB7 349 aa3.38□□□□□ -1.87
SUPT20H-215ENST00000478911 ZNF48Q96MX3 618 aaPredicted RBP3.38□□□□□ -1.87
SUPT20H-215ENST00000478911 LRFN5Q96NI6 719 aa3.38□□□□□ -1.87
SUPT20H-215ENST00000478911 SERINC2Q96SA4 455 aa3.38□□□□□ -1.87
SUPT20H-215ENST00000478911 PCGF1Q9BSM1 259 aa3.38□□□□□ -1.87
SUPT20H-215ENST00000478911 PPP1R3EQ9H7J1 279 aa3.38□□□□□ -1.87
SUPT20H-215ENST00000478911 MMP25Q9NPA2 562 aa3.38□□□□□ -1.87
SUPT20H-215ENST00000478911 CWC15Q9P013 229 aaKnown RBP3.38□□□□□ -1.87
SUPT20H-215ENST00000478911 POLG2Q9UHN1 485 aa3.38□□□□□ -1.87
SUPT20H-215ENST00000478911 RPS6KA6Q9UK32 745 aa3.38□□□□□ -1.87
SUPT20H-215ENST00000478911 RCOR1Q9UKL0 485 aa3.38□□□□□ -1.87
SUPT20H-215ENST00000478911 NENFQ9UMX5 172 aa3.38□□□□□ -1.87
SUPT20H-215ENST00000478911 PAM16Q9Y3D7 125 aa3.38□□□□□ -1.87
SUPT20H-215ENST00000478911 TTLL3Q9Y4R7 772 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms