RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 GCATO75600 419 aa10.26□□□□□ -0.77
HDAC6-222ENST00000478095 ZNF189O75820 626 aaPredicted RBP10.26□□□□□ -0.77
HDAC6-222ENST00000478095 ANXA9O76027 345 aa10.26□□□□□ -0.77
HDAC6-222ENST00000478095 AGTP01019 485 aa10.26□□□□□ -0.77
HDAC6-222ENST00000478095 ZSCAN5DPP0CG00 497 aa10.26□□□□□ -0.77
HDAC6-222ENST00000478095 ZNF30P17039 623 aa10.26□□□□□ -0.77
HDAC6-222ENST00000478095 ID4P47928 161 aa10.26□□□□□ -0.77
HDAC6-222ENST00000478095 KCNJ1P48048 391 aa10.26□□□□□ -0.77
HDAC6-222ENST00000478095 STC1P52823 247 aa10.26□□□□□ -0.77
HDAC6-222ENST00000478095 THOP1P52888 689 aa10.26□□□□□ -0.77
HDAC6-222ENST00000478095 FZD2Q14332 565 aa10.26□□□□□ -0.77
HDAC6-222ENST00000478095 AGERQ15109 404 aa10.26□□□□□ -0.77
HDAC6-222ENST00000478095 SHBQ15464 509 aa10.26□□□□□ -0.77
HDAC6-222ENST00000478095 CCNG2Q16589 344 aa10.26□□□□□ -0.77
HDAC6-222ENST00000478095 CDKN3Q16667 212 aa10.26□□□□□ -0.77
HDAC6-222ENST00000478095 SIRPB2Q5JXA9 342 aa10.26□□□□□ -0.77
HDAC6-222ENST00000478095 RAET1GQ6H3X3 334 aa10.26□□□□□ -0.77
HDAC6-222ENST00000478095 NYAP1Q6ZVC0 841 aa10.26□□□□□ -0.77
HDAC6-222ENST00000478095 TECPR1Q7Z6L1 1165 aa10.26□□□□□ -0.77
HDAC6-222ENST00000478095 GATAD2AQ86YP4 633 aa10.26□□□□□ -0.77
HDAC6-222ENST00000478095 CBARPQ8N350 705 aaPredicted RBP10.26□□□□□ -0.77
HDAC6-222ENST00000478095 RASGEF1CQ8N431 466 aa10.26□□□□□ -0.77
HDAC6-222ENST00000478095 PRELID2Q8N945 189 aa10.26□□□□□ -0.77
HDAC6-222ENST00000478095 GLIS1Q8NBF1 620 aa10.26□□□□□ -0.77
HDAC6-222ENST00000478095 BLOC1S5Q8TDH9 187 aa10.26□□□□□ -0.77
HDAC6-222ENST00000478095 MAIP1Q8WWC4 291 aa10.26□□□□□ -0.77
HDAC6-222ENST00000478095 SCAMP4Q969E2 229 aa10.26□□□□□ -0.77
HDAC6-222ENST00000478095 PBKQ96KB5 322 aa10.26□□□□□ -0.77
HDAC6-222ENST00000478095 CAMK1GQ96NX5 476 aa10.26□□□□□ -0.77
HDAC6-222ENST00000478095 LYSMD1Q96S90 227 aa10.26□□□□□ -0.77
HDAC6-222ENST00000478095 GPR27Q9NS67 375 aa10.26□□□□□ -0.77
HDAC6-222ENST00000478095 DNAJC28Q9NX36 388 aa10.26□□□□□ -0.77
HDAC6-222ENST00000478095 DLL3Q9NYJ7 618 aa10.26□□□□□ -0.77
HDAC6-222ENST00000478095 LAMA1P25391 3075 aa10.25□□□□□ -0.77
HDAC6-222ENST00000478095 SHROOM3Q8TF72 1996 aa10.25□□□□□ -0.77
HDAC6-222ENST00000478095 PCDH15Q96QU1 1955 aa10.25□□□□□ -0.77
HDAC6-222ENST00000478095 ZNF292O60281 2723 aa10.25□□□□□ -0.77
HDAC6-222ENST00000478095 SPTY2D1-AS1A0A0U1RR47 76 aa10.25□□□□□ -0.77
HDAC6-222ENST00000478095 PGRMC1O00264 195 aaKnown RBP10.25□□□□□ -0.77
HDAC6-222ENST00000478095 SCAMP1O15126 338 aa10.25□□□□□ -0.77
HDAC6-222ENST00000478095 FANCGO15287 622 aa10.25□□□□□ -0.77
HDAC6-222ENST00000478095 BUD23O43709 281 aaKnown RBP10.25□□□□□ -0.77
HDAC6-222ENST00000478095 SH3BP5O60239 455 aa10.25□□□□□ -0.77
HDAC6-222ENST00000478095 ITGAVP06756 1048 aa10.25□□□□□ -0.77
HDAC6-222ENST00000478095 CD59P13987 128 aa10.25□□□□□ -0.77
HDAC6-222ENST00000478095 HLA-DPA1P20036 260 aa10.25□□□□□ -0.77
HDAC6-222ENST00000478095 EPHA8P29322 1005 aaPredicted RBP10.25□□□□□ -0.77
HDAC6-222ENST00000478095 STIP1P31948 543 aaKnown RBP10.25□□□□□ -0.77
HDAC6-222ENST00000478095 ARRB1P49407 418 aaPredicted RBP10.25□□□□□ -0.77
HDAC6-222ENST00000478095 BNIP3Q12983 259 aa10.25□□□□□ -0.77
HDAC6-222ENST00000478095 MTM1Q13496 603 aa10.25□□□□□ -0.77
HDAC6-222ENST00000478095 NFATC4Q14934 902 aa10.25□□□□□ -0.77
HDAC6-222ENST00000478095 TCEA2Q15560 299 aa10.25□□□□□ -0.77
HDAC6-222ENST00000478095 SLC1A5Q15758 541 aa10.25□□□□□ -0.77
HDAC6-222ENST00000478095 PARP6Q2NL67 630 aa10.25□□□□□ -0.77
HDAC6-222ENST00000478095 P3H1Q32P28 736 aa10.25□□□□□ -0.77
HDAC6-222ENST00000478095 ALS2CLQ60I27 953 aa10.25□□□□□ -0.77
HDAC6-222ENST00000478095 KCTD16Q68DU8 428 aa10.25□□□□□ -0.77
HDAC6-222ENST00000478095 ESRP1Q6NXG1 681 aaKnown RBP10.25□□□□□ -0.77
HDAC6-222ENST00000478095 PNCKQ6P2M8 343 aa10.25□□□□□ -0.77
HDAC6-222ENST00000478095 GSTA5Q7RTV2 222 aa10.25□□□□□ -0.77
HDAC6-222ENST00000478095 PARGQ86W56 976 aa10.25□□□□□ -0.77
HDAC6-222ENST00000478095 RBFAQ8N0V3 343 aa10.25□□□□□ -0.77
HDAC6-222ENST00000478095 CCDC89Q8N998 374 aa10.25□□□□□ -0.77
HDAC6-222ENST00000478095 DEFB124Q8NES8 71 aa10.25□□□□□ -0.77
HDAC6-222ENST00000478095 FAM174AQ8TBP5 190 aa10.25□□□□□ -0.77
HDAC6-222ENST00000478095 CCHCR1Q8TD31 782 aa10.25□□□□□ -0.77
HDAC6-222ENST00000478095 SETD7Q8WTS6 366 aaKnown RBP10.25□□□□□ -0.77
HDAC6-222ENST00000478095 FUBP1Q96AE4 644 aaKnown RBP10.25□□□□□ -0.77
HDAC6-222ENST00000478095 AP2M1Q96CW1 435 aa10.25□□□□□ -0.77
HDAC6-222ENST00000478095 EID2BQ96D98 161 aa10.25□□□□□ -0.77
HDAC6-222ENST00000478095 RTP4Q96DX8 246 aa10.25□□□□□ -0.77
HDAC6-222ENST00000478095 AGAP2Q99490 1192 aa10.25□□□□□ -0.77
HDAC6-222ENST00000478095 NAPGQ99747 312 aaPredicted RBP10.25□□□□□ -0.77
HDAC6-222ENST00000478095 TBL1YQ9BQ87 522 aa10.25□□□□□ -0.77
HDAC6-222ENST00000478095 RTKNQ9BST9 563 aa10.25□□□□□ -0.77
HDAC6-222ENST00000478095 APOOQ9BUR5 198 aa10.25□□□□□ -0.77
HDAC6-222ENST00000478095 RIOK2Q9BVS4 552 aaKnown RBP10.25□□□□□ -0.77
HDAC6-222ENST00000478095 LGR4Q9BXB1 951 aa10.25□□□□□ -0.77
HDAC6-222ENST00000478095 GPR63Q9BZJ6 419 aa10.25□□□□□ -0.77
HDAC6-222ENST00000478095 ABCG8Q9H221 673 aa10.25□□□□□ -0.77
HDAC6-222ENST00000478095 WDR26Q9H7D7 661 aa10.25□□□□□ -0.77
HDAC6-222ENST00000478095 ZFYVE1Q9HBF4 777 aa10.25□□□□□ -0.77
HDAC6-222ENST00000478095 MAGEE1Q9HCI5 957 aa10.25□□□□□ -0.77
HDAC6-222ENST00000478095 PIH1D1Q9NWS0 290 aaKnown RBP10.25□□□□□ -0.77
HDAC6-222ENST00000478095 PNMA8BQ9ULN7 279 aaPredicted RBP10.25□□□□□ -0.77
HDAC6-222ENST00000478095 BTBD3Q9Y2F9 522 aa10.25□□□□□ -0.77
HDAC6-222ENST00000478095 AAR2Q9Y312 384 aaKnown RBP10.25□□□□□ -0.77
HDAC6-222ENST00000478095 PLXNA2O75051 1894 aa10.25□□□□□ -0.77
HDAC6-222ENST00000478095 DMXL1Q9Y485 3027 aa10.25□□□□□ -0.77
HDAC6-222ENST00000478095 CACNB4O00305 520 aaPredicted RBP10.24□□□□□ -0.77
HDAC6-222ENST00000478095 TM4SF5O14894 197 aa10.24□□□□□ -0.77
HDAC6-222ENST00000478095 GIPC1O14908 333 aa10.24□□□□□ -0.77
HDAC6-222ENST00000478095 SOD1P00441 154 aa10.24□□□□□ -0.77
HDAC6-222ENST00000478095 EPOP01588 193 aa10.24□□□□□ -0.77
HDAC6-222ENST00000478095 FGF1P05230 155 aa10.24□□□□□ -0.77
HDAC6-222ENST00000478095 SDHBP21912 280 aa10.24□□□□□ -0.77
HDAC6-222ENST00000478095 ADRA1AP35348 466 aa10.24□□□□□ -0.77
HDAC6-222ENST00000478095 ACTN2P35609 894 aa10.24□□□□□ -0.77
HDAC6-222ENST00000478095 GPR1P46091 355 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms