RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 FBXO8Q9NRD0 319 aa20.22■□□□□ 0.83
PDLIM1-202ENST00000477757 RWDD2AQ9UIY3 292 aa20.22■□□□□ 0.83
PDLIM1-202ENST00000477757 CRYBG3Q68DQ2 2970 aa20.22■□□□□ 0.83
PDLIM1-202ENST00000477757 J3KR12 359 aa20.21■□□□□ 0.83
PDLIM1-202ENST00000477757 PRAMEF11O60813 436 aa20.21■□□□□ 0.83
PDLIM1-202ENST00000477757 VPS4BO75351 444 aa20.21■□□□□ 0.83
PDLIM1-202ENST00000477757 DLGAP3O95886 979 aa20.21■□□□□ 0.83
PDLIM1-202ENST00000477757 MMP8P22894 467 aa20.21■□□□□ 0.83
PDLIM1-202ENST00000477757 ERCC5P28715 1186 aaPredicted RBP20.21■□□□□ 0.83
PDLIM1-202ENST00000477757 ADCY8P40145 1251 aa20.21■□□□□ 0.83
PDLIM1-202ENST00000477757 FASLGP48023 281 aa20.21■□□□□ 0.83
PDLIM1-202ENST00000477757 ARHGAP22Q7Z5H3 698 aa20.21■□□□□ 0.83
PDLIM1-202ENST00000477757 SLFN11Q7Z7L1 901 aa20.21■□□□□ 0.83
PDLIM1-202ENST00000477757 PHLDB2Q86SQ0 1253 aa20.21■□□□□ 0.83
PDLIM1-202ENST00000477757 LRRC19Q9H756 370 aa20.21■□□□□ 0.83
PDLIM1-202ENST00000477757 CATSPERBQ9H7T0 1116 aa20.21■□□□□ 0.83
PDLIM1-202ENST00000477757 VPS4AQ9UN37 437 aa20.21■□□□□ 0.83
PDLIM1-202ENST00000477757 SLC17A4Q9Y2C5 497 aa20.21■□□□□ 0.83
PDLIM1-202ENST00000477757 FHOD1Q9Y613 1164 aa20.21■□□□□ 0.83
PDLIM1-202ENST00000477757 IVLP07476 585 aa20.2■□□□□ 0.82
PDLIM1-202ENST00000477757 GNLYP22749 145 aa20.2■□□□□ 0.82
PDLIM1-202ENST00000477757 ACTR1BP42025 376 aa20.2■□□□□ 0.82
PDLIM1-202ENST00000477757 ACTR1AP61163 376 aa20.2■□□□□ 0.82
PDLIM1-202ENST00000477757 POLR2LP62875 67 aaKnown RBP20.2■□□□□ 0.82
PDLIM1-202ENST00000477757 CDK3Q00526 305 aa20.2■□□□□ 0.82
PDLIM1-202ENST00000477757 BCL2L1Q07817 233 aa20.2■□□□□ 0.82
PDLIM1-202ENST00000477757 MAP7Q14244 749 aa20.2■□□□□ 0.82
PDLIM1-202ENST00000477757 ASB18Q6ZVZ8 466 aa20.2■□□□□ 0.82
PDLIM1-202ENST00000477757 CCDC13Q8IYE1 715 aa20.2■□□□□ 0.82
PDLIM1-202ENST00000477757 TSEN2Q8NCE0 465 aaKnown RBP20.2■□□□□ 0.82
PDLIM1-202ENST00000477757 OR10G6Q8NH81 332 aa20.2■□□□□ 0.82
PDLIM1-202ENST00000477757 B4GALT6Q9UBX8 382 aa20.2■□□□□ 0.82
PDLIM1-202ENST00000477757 MRPS18BQ9Y676 258 aaKnown RBP20.2■□□□□ 0.82
PDLIM1-202ENST00000477757 DOPEY1Q5JWR5 2465 aa20.2■□□□□ 0.82
PDLIM1-202ENST00000477757 PRRC2CQ9Y520 2896 aaKnown RBP20.2■□□□□ 0.82
PDLIM1-202ENST00000477757 A8MX80 341 aa20.19■□□□□ 0.82
PDLIM1-202ENST00000477757 TRAFD1O14545 582 aaPredicted RBP20.19■□□□□ 0.82
PDLIM1-202ENST00000477757 FGF10O15520 208 aaPredicted RBP20.19■□□□□ 0.82
PDLIM1-202ENST00000477757 MTIF2P46199 727 aaKnown RBP20.19■□□□□ 0.82
PDLIM1-202ENST00000477757 CNGA3Q16281 694 aa20.19■□□□□ 0.82
PDLIM1-202ENST00000477757 WDR74Q6RFH5 385 aaPredicted RBP20.19■□□□□ 0.82
PDLIM1-202ENST00000477757 ESX1Q8N693 406 aa20.19■□□□□ 0.82
PDLIM1-202ENST00000477757 PAF1Q8N7H5 531 aa20.19■□□□□ 0.82
PDLIM1-202ENST00000477757 SPOCK2Q92563 424 aa20.19■□□□□ 0.82
PDLIM1-202ENST00000477757 AHCYL2Q96HN2 611 aaKnown RBP20.19■□□□□ 0.82
PDLIM1-202ENST00000477757 APMAPQ9HDC9 416 aa20.19■□□□□ 0.82
PDLIM1-202ENST00000477757 KCTD5Q9NXV2 234 aa20.19■□□□□ 0.82
PDLIM1-202ENST00000477757 RPS6KL1Q9Y6S9 549 aa20.19■□□□□ 0.82
PDLIM1-202ENST00000477757 CREB3O43889 395 aa20.18■□□□□ 0.82
PDLIM1-202ENST00000477757 RFPL1O75677 317 aa20.18■□□□□ 0.82
PDLIM1-202ENST00000477757 TEAD1P28347 426 aa20.18■□□□□ 0.82
PDLIM1-202ENST00000477757 MAN2A1Q16706 1144 aa20.18■□□□□ 0.82
PDLIM1-202ENST00000477757 SNAP47Q5SQN1 464 aa20.18■□□□□ 0.82
PDLIM1-202ENST00000477757 ZNF761Q86XN6 746 aaPredicted RBP20.18■□□□□ 0.82
PDLIM1-202ENST00000477757 EFCAB3Q8N7B9 438 aa20.18■□□□□ 0.82
PDLIM1-202ENST00000477757 SLC37A2Q8TED4 501 aa20.18■□□□□ 0.82
PDLIM1-202ENST00000477757 DTD2Q96FN9 168 aa20.18■□□□□ 0.82
PDLIM1-202ENST00000477757 SCARF2Q96GP6 870 aaPredicted RBP20.18■□□□□ 0.82
PDLIM1-202ENST00000477757 OR2M4Q96R27 311 aa20.18■□□□□ 0.82
PDLIM1-202ENST00000477757 C11orf70Q9BRQ4 267 aa20.18■□□□□ 0.82
PDLIM1-202ENST00000477757 NAA15Q9BXJ9 866 aaKnown RBP20.18■□□□□ 0.82
PDLIM1-202ENST00000477757 IGSF5Q9NSI5 407 aa20.18■□□□□ 0.82
PDLIM1-202ENST00000477757 CUEDC1Q9NWM3 386 aaPredicted RBP20.18■□□□□ 0.82
PDLIM1-202ENST00000477757 NOCTQ9UK39 431 aaKnown RBP20.18■□□□□ 0.82
PDLIM1-202ENST00000477757 A8MU76 341 aa20.17■□□□□ 0.82
PDLIM1-202ENST00000477757 F8VZ95 297 aa20.17■□□□□ 0.82
PDLIM1-202ENST00000477757 CYP1A1P04798 512 aaPredicted RBP20.17■□□□□ 0.82
PDLIM1-202ENST00000477757 RNF224P0DH78 156 aa20.17■□□□□ 0.82
PDLIM1-202ENST00000477757 F8A1P23610 371 aa20.17■□□□□ 0.82
PDLIM1-202ENST00000477757 POLD2P49005 469 aa20.17■□□□□ 0.82
PDLIM1-202ENST00000477757 NDST2P52849 883 aa20.17■□□□□ 0.82
PDLIM1-202ENST00000477757 CHCHD2P9Q5T1J5 151 aaPredicted RBP20.17■□□□□ 0.82
PDLIM1-202ENST00000477757 ZNF677Q86XU0 584 aa20.17■□□□□ 0.82
PDLIM1-202ENST00000477757 SFRP1Q8N474 314 aa20.17■□□□□ 0.82
PDLIM1-202ENST00000477757 SLC20A1Q8WUM9 679 aa20.17■□□□□ 0.82
PDLIM1-202ENST00000477757 SLC38A3Q99624 504 aa20.17■□□□□ 0.82
PDLIM1-202ENST00000477757 CINPQ9BW66 212 aaPredicted RBP20.17■□□□□ 0.82
PDLIM1-202ENST00000477757 POLHQ9Y253 713 aa20.17■□□□□ 0.82
PDLIM1-202ENST00000477757 PLEKHM1Q9Y4G2 1056 aa20.17■□□□□ 0.82
PDLIM1-202ENST00000477757 PCDHB3Q9Y5E6 796 aa20.17■□□□□ 0.82
PDLIM1-202ENST00000477757 ZNF106Q9H2Y7 1883 aaKnown RBP20.16■□□□□ 0.82
PDLIM1-202ENST00000477757 PALMO75781 387 aa20.16■□□□□ 0.82
PDLIM1-202ENST00000477757 HEXIM1O94992 359 aaKnown RBP20.16■□□□□ 0.82
PDLIM1-202ENST00000477757 KRT3P12035 628 aa20.16■□□□□ 0.82
PDLIM1-202ENST00000477757 GPD1P21695 349 aa20.16■□□□□ 0.82
PDLIM1-202ENST00000477757 RFC1P35251 1148 aaPredicted RBP20.16■□□□□ 0.82
PDLIM1-202ENST00000477757 ETV3P41162 512 aa20.16■□□□□ 0.82
PDLIM1-202ENST00000477757 NOP2P46087 812 aaKnown RBP20.16■□□□□ 0.82
PDLIM1-202ENST00000477757 PPM1FP49593 454 aaPredicted RBP20.16■□□□□ 0.82
PDLIM1-202ENST00000477757 PMS2P54278 862 aa20.16■□□□□ 0.82
PDLIM1-202ENST00000477757 AIF1P55008 147 aa20.16■□□□□ 0.82
PDLIM1-202ENST00000477757 GSCP56915 257 aaPredicted RBP20.16■□□□□ 0.82
PDLIM1-202ENST00000477757 AP1S1P61966 158 aa20.16■□□□□ 0.82
PDLIM1-202ENST00000477757 KLHDC7AQ5VTJ3 777 aa20.16■□□□□ 0.82
PDLIM1-202ENST00000477757 NSMCE3Q96MG7 304 aa20.16■□□□□ 0.82
PDLIM1-202ENST00000477757 NDST4Q9H3R1 872 aa20.16■□□□□ 0.82
PDLIM1-202ENST00000477757 SIDT1Q9NXL6 827 aaKnown RBP20.16■□□□□ 0.82
PDLIM1-202ENST00000477757 DONSONQ9NYP3 566 aa20.16■□□□□ 0.82
PDLIM1-202ENST00000477757 POLR1CO15160 346 aaPredicted RBP20.15■□□□□ 0.82
PDLIM1-202ENST00000477757 SEMA7AO75326 666 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms