RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 MOSPD3O75425 235 aa7.93□□□□□ -1.14
VMA21-203ENST00000477649 VPS26AO75436 327 aa7.93□□□□□ -1.14
VMA21-203ENST00000477649 WISP3O95389 354 aaPredicted RBP7.93□□□□□ -1.14
VMA21-203ENST00000477649 POP4O95707 220 aaKnown RBP7.93□□□□□ -1.14
VMA21-203ENST00000477649 PABPC1P11940 636 aaKnown RBP7.93□□□□□ -1.14
VMA21-203ENST00000477649 CALB2P22676 271 aa7.93□□□□□ -1.14
VMA21-203ENST00000477649 RPS3P23396 243 aaKnown RBP eCLIP7.93□□□□□ -1.14
VMA21-203ENST00000477649 RECQLP46063 649 aaPredicted RBP7.93□□□□□ -1.14
VMA21-203ENST00000477649 RGRP47804 291 aa7.93□□□□□ -1.14
VMA21-203ENST00000477649 ARSDP51689 593 aa7.93□□□□□ -1.14
VMA21-203ENST00000477649 IRX1P78414 480 aaPredicted RBP7.93□□□□□ -1.14
VMA21-203ENST00000477649 FOXK1P85037 733 aa7.93□□□□□ -1.14
VMA21-203ENST00000477649 PFKPQ01813 784 aa7.93□□□□□ -1.14
VMA21-203ENST00000477649 GPM6BQ13491 265 aa7.93□□□□□ -1.14
VMA21-203ENST00000477649 ITGA9Q13797 1035 aa7.93□□□□□ -1.14
VMA21-203ENST00000477649 RCN2Q14257 317 aa7.93□□□□□ -1.14
VMA21-203ENST00000477649 TEAD2Q15562 447 aa7.93□□□□□ -1.14
VMA21-203ENST00000477649 DLG2Q15700 870 aa7.93□□□□□ -1.14
VMA21-203ENST00000477649 PITRM1Q5JRX3 1037 aa7.93□□□□□ -1.14
VMA21-203ENST00000477649 CFAP157Q5JU67 520 aa7.93□□□□□ -1.14
VMA21-203ENST00000477649 SH2D4BQ5SQS7 431 aa7.93□□□□□ -1.14
VMA21-203ENST00000477649 GRAMD4Q6IC98 578 aa7.93□□□□□ -1.14
VMA21-203ENST00000477649 USP45Q70EL2 814 aa7.93□□□□□ -1.14
VMA21-203ENST00000477649 RAB44Q7Z6P3 723 aaPredicted RBP7.93□□□□□ -1.14
VMA21-203ENST00000477649 KIAA0907Q7Z7F0 614 aaPredicted RBP7.93□□□□□ -1.14
VMA21-203ENST00000477649 MTDHQ86UE4 582 aaKnown RBP7.93□□□□□ -1.14
VMA21-203ENST00000477649 SUGP1Q8IWZ8 645 aaKnown RBP7.93□□□□□ -1.14
VMA21-203ENST00000477649 CENPLQ8N0S6 344 aaPredicted RBP7.93□□□□□ -1.14
VMA21-203ENST00000477649 ARHGAP24Q8N264 748 aa7.93□□□□□ -1.14
VMA21-203ENST00000477649 PLD6Q8N2A8 252 aaKnown RBP7.93□□□□□ -1.14
VMA21-203ENST00000477649 TTC30BQ8N4P2 665 aa7.93□□□□□ -1.14
VMA21-203ENST00000477649 KDM1BQ8NB78 822 aa7.93□□□□□ -1.14
VMA21-203ENST00000477649 OR4K2Q8NGD2 314 aa7.93□□□□□ -1.14
VMA21-203ENST00000477649 RFWD2Q8NHY2 731 aa7.93□□□□□ -1.14
VMA21-203ENST00000477649 KCTD4Q8WVF5 259 aa7.93□□□□□ -1.14
VMA21-203ENST00000477649 PIH1D2Q8WWB5 315 aa7.93□□□□□ -1.14
VMA21-203ENST00000477649 AARSD1Q9BTE6 412 aaKnown RBP7.93□□□□□ -1.14
VMA21-203ENST00000477649 OSBPL1AQ9BXW6 950 aa7.93□□□□□ -1.14
VMA21-203ENST00000477649 GPR63Q9BZJ6 419 aa7.93□□□□□ -1.14
VMA21-203ENST00000477649 CDH19Q9H159 772 aa7.93□□□□□ -1.14
VMA21-203ENST00000477649 MYLK2Q9H1R3 596 aa7.93□□□□□ -1.14
VMA21-203ENST00000477649 LRMDAQ9H2I8 198 aa7.93□□□□□ -1.14
VMA21-203ENST00000477649 MMADHCQ9H3L0 296 aaPredicted RBP7.93□□□□□ -1.14
VMA21-203ENST00000477649 TFB2MQ9H5Q4 396 aaKnown RBP7.93□□□□□ -1.14
VMA21-203ENST00000477649 ECT2Q9H8V3 914 aa7.93□□□□□ -1.14
VMA21-203ENST00000477649 SFXN1Q9H9B4 322 aa7.93□□□□□ -1.14
VMA21-203ENST00000477649 CAB39LQ9H9S4 337 aa7.93□□□□□ -1.14
VMA21-203ENST00000477649 KCNK13Q9HB14 408 aa7.93□□□□□ -1.14
VMA21-203ENST00000477649 ARHGEF3Q9NR81 526 aa7.93□□□□□ -1.14
VMA21-203ENST00000477649 SPHK2Q9NRA0 654 aa7.93□□□□□ -1.14
VMA21-203ENST00000477649 IL17CQ9P0M4 197 aa7.93□□□□□ -1.14
VMA21-203ENST00000477649 KLHL42Q9P2K6 505 aa7.93□□□□□ -1.14
VMA21-203ENST00000477649 XPR1Q9UBH6 696 aa7.93□□□□□ -1.14
VMA21-203ENST00000477649 DCTN4Q9UJW0 460 aa7.93□□□□□ -1.14
VMA21-203ENST00000477649 TRIM33Q9UPN9 1127 aa7.93□□□□□ -1.14
VMA21-203ENST00000477649 DNAJC16Q9Y2G8 782 aa7.93□□□□□ -1.14
VMA21-203ENST00000477649 MRPS23Q9Y3D9 190 aaKnown RBP7.93□□□□□ -1.14
VMA21-203ENST00000477649 ZNF711Q9Y462 761 aa7.93□□□□□ -1.14
VMA21-203ENST00000477649 PCDHB9Q9Y5E1 797 aa7.93□□□□□ -1.14
VMA21-203ENST00000477649 PCDHGC4Q9Y5F7 938 aa7.93□□□□□ -1.14
VMA21-203ENST00000477649 SLC30A1Q9Y6M5 507 aa7.93□□□□□ -1.14
VMA21-203ENST00000477649 ANAPC1Q9H1A4 1944 aa7.93□□□□□ -1.14
VMA21-203ENST00000477649 A0A0J9YYE9 177 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 RGSL1A5PLK6 1076 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 CAPN8A6NHC0 703 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 TRPC5OSA6NMA1 111 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 HDAC3O15379 428 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 HOXC11O43248 304 aaPredicted RBP7.92□□□□□ -1.14
VMA21-203ENST00000477649 IPO13O94829 963 aaKnown RBP7.92□□□□□ -1.14
VMA21-203ENST00000477649 ADH1CP00326 375 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 TRBC1P01850 177 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 SRPRAP08240 638 aaKnown RBP7.92□□□□□ -1.14
VMA21-203ENST00000477649 CCDC166P0CW27 439 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 TPBGLP0DKB5 382 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 SRCP12931 536 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 PKMP14618 531 aaKnown RBP7.92□□□□□ -1.14
VMA21-203ENST00000477649 ZNF7P17097 686 aaPredicted RBP7.92□□□□□ -1.14
VMA21-203ENST00000477649 ITGALP20701 1170 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 SAT1P21673 171 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 PTPN4P29074 926 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 PRDX6P30041 224 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 CCR2P41597 374 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 RPL14P50914 215 aaKnown RBP7.92□□□□□ -1.14
VMA21-203ENST00000477649 AQP5P55064 265 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 NCALDP61601 193 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 IRX4P78413 519 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 ECT2LQ008S8 904 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 IRF9Q00978 393 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 OVGP1Q12889 678 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 RIPK1Q13546 671 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 CSHL1Q14406 222 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 ZRSR2Q15696 482 aaKnown RBP7.92□□□□□ -1.14
VMA21-203ENST00000477649 RAB30Q15771 203 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 MYLK3Q32MK0 819 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 PREPLQ4J6C6 727 aaPredicted RBP7.92□□□□□ -1.14
VMA21-203ENST00000477649 CARD16Q5EG05 197 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 TECRLQ5HYJ1 363 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 C22orf39Q6P5X5 142 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 BRAT1Q6PJG6 821 aa7.92□□□□□ -1.14
VMA21-203ENST00000477649 TXNDC11Q6PKC3 985 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms