RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 ITCHQ96J02 903 aa18.58■□□□□ 0.56
VARS2-209ENST00000477288 MRPL57Q9BQC6 102 aaKnown RBP18.58■□□□□ 0.56
VARS2-209ENST00000477288 PRDM8Q9NQV8 689 aa18.58■□□□□ 0.56
VARS2-209ENST00000477288 PPP2R2BQ00005 443 aa18.58■□□□□ 0.56
VARS2-209ENST00000477288 SULT2A1Q06520 285 aa18.58■□□□□ 0.56
VARS2-209ENST00000477288 SF1Q15637 639 aaKnown RBP18.58■□□□□ 0.56
VARS2-209ENST00000477288 TXNDC11Q6PKC3 985 aa18.58■□□□□ 0.56
VARS2-209ENST00000477288 NRSN1Q8IZ57 195 aa18.58■□□□□ 0.56
VARS2-209ENST00000477288 TRPM4Q8TD43 1214 aa18.58■□□□□ 0.56
VARS2-209ENST00000477288 C5orf34Q96MH7 638 aa18.58■□□□□ 0.56
VARS2-209ENST00000477288 OR52E6Q96RD3 313 aa18.58■□□□□ 0.56
VARS2-209ENST00000477288 AARSD1Q9BTE6 412 aaKnown RBP18.58■□□□□ 0.56
VARS2-209ENST00000477288 HECAQ9UBI9 543 aaPredicted RBP18.58■□□□□ 0.56
VARS2-209ENST00000477288 C2CD2Q9Y426 696 aa18.58■□□□□ 0.56
VARS2-209ENST00000477288 PCDHGC5Q9Y5F6 944 aa18.58■□□□□ 0.56
VARS2-209ENST00000477288 PCCBP05166 539 aa18.57■□□□□ 0.56
VARS2-209ENST00000477288 HNRNPLP14866 589 aaKnown RBP eCLIP18.57■□□□□ 0.56
VARS2-209ENST00000477288 ALAS2P22557 587 aa18.57■□□□□ 0.56
VARS2-209ENST00000477288 CXCR3P49682 368 aa18.57■□□□□ 0.56
VARS2-209ENST00000477288 ZBTB46Q86UZ6 589 aa18.57■□□□□ 0.56
VARS2-209ENST00000477288 PTCD3Q96EY7 689 aaKnown RBP18.57■□□□□ 0.56
VARS2-209ENST00000477288 MAML3Q96JK9 1138 aa18.57■□□□□ 0.56
VARS2-209ENST00000477288 SSR3Q9UNL2 185 aa18.57■□□□□ 0.56
VARS2-209ENST00000477288 PAX3P23760 479 aa18.57■□□□□ 0.56
VARS2-209ENST00000477288 ACADLP28330 430 aa18.57■□□□□ 0.56
VARS2-209ENST00000477288 ACLYP53396 1101 aa18.57■□□□□ 0.56
VARS2-209ENST00000477288 MANFP55145 182 aaKnown RBP18.57■□□□□ 0.56
VARS2-209ENST00000477288 RGS21Q2M5E4 152 aa18.57■□□□□ 0.56
VARS2-209ENST00000477288 TTC27Q6P3X3 843 aa18.57■□□□□ 0.56
VARS2-209ENST00000477288 AADATQ8N5Z0 425 aa18.57■□□□□ 0.56
VARS2-209ENST00000477288 KBTBD8Q8NFY9 601 aa18.57■□□□□ 0.56
VARS2-209ENST00000477288 PIH1D2Q8WWB5 315 aa18.57■□□□□ 0.56
VARS2-209ENST00000477288 FCRL2Q96LA5 508 aaPredicted RBP18.57■□□□□ 0.56
VARS2-209ENST00000477288 C1QTNF1Q9BXJ1 281 aa18.57■□□□□ 0.56
VARS2-209ENST00000477288 PCDHAC2Q9Y5I4 1007 aa18.57■□□□□ 0.56
VARS2-209ENST00000477288 CNTNAP1P78357 1384 aa18.57■□□□□ 0.56
VARS2-209ENST00000477288 SSR2P43308 183 aa18.57■□□□□ 0.56
VARS2-209ENST00000477288 TRIM40Q6P9F5 258 aa18.57■□□□□ 0.56
VARS2-209ENST00000477288 GLIS3Q8NEA6 775 aa18.57■□□□□ 0.56
VARS2-209ENST00000477288 COX4I2Q96KJ9 171 aa18.57■□□□□ 0.56
VARS2-209ENST00000477288 NXF3Q9H4D5 531 aaKnown RBP18.57■□□□□ 0.56
VARS2-209ENST00000477288 SLC6A2P23975 617 aa18.57■□□□□ 0.56
VARS2-209ENST00000477288 PDHA2P29803 388 aa18.57■□□□□ 0.56
VARS2-209ENST00000477288 ITGA7Q13683 1181 aa18.57■□□□□ 0.56
VARS2-209ENST00000477288 CHSY3Q70JA7 882 aa18.57■□□□□ 0.56
VARS2-209ENST00000477288 ARHGAP22Q7Z5H3 698 aa18.57■□□□□ 0.56
VARS2-209ENST00000477288 ANKRD27Q96NW4 1050 aa18.57■□□□□ 0.56
VARS2-209ENST00000477288 DUSP16Q9BY84 665 aa18.57■□□□□ 0.56
VARS2-209ENST00000477288 MRTO4Q9UKD2 239 aaKnown RBP18.57■□□□□ 0.56
VARS2-209ENST00000477288 SHBGP04278 402 aa18.57■□□□□ 0.56
VARS2-209ENST00000477288 IRGCQ6NXR0 463 aa18.57■□□□□ 0.56
VARS2-209ENST00000477288 NET1Q7Z628 596 aaPredicted RBP18.57■□□□□ 0.56
VARS2-209ENST00000477288 ATCAYQ86WG3 371 aa18.57■□□□□ 0.56
VARS2-209ENST00000477288 ATP6AP2A0A1C7CYW4 349 aa18.56■□□□□ 0.56
VARS2-209ENST00000477288 AREL1O15033 823 aa18.56■□□□□ 0.56
VARS2-209ENST00000477288 PAPSS1O43252 624 aaPredicted RBP18.56■□□□□ 0.56
VARS2-209ENST00000477288 ATP6AP2O75787 350 aa18.56■□□□□ 0.56
VARS2-209ENST00000477288 RNASEH2AO75792 299 aaKnown RBP18.56■□□□□ 0.56
VARS2-209ENST00000477288 RASGRP1O95267 797 aa18.56■□□□□ 0.56
VARS2-209ENST00000477288 LAG3P18627 525 aa18.56■□□□□ 0.56
VARS2-209ENST00000477288 TREML2Q5T2D2 321 aa18.56■□□□□ 0.56
VARS2-209ENST00000477288 OR5B17Q8NGF7 314 aa18.56■□□□□ 0.56
VARS2-209ENST00000477288 SLC4A9Q96Q91 983 aa18.56■□□□□ 0.56
VARS2-209ENST00000477288 ZNF670Q9BS34 389 aa18.56■□□□□ 0.56
VARS2-209ENST00000477288 KCNN2Q9H2S1 579 aa18.56■□□□□ 0.56
VARS2-209ENST00000477288 KCNMB3Q9NPA1 279 aa18.56■□□□□ 0.56
VARS2-209ENST00000477288 TRIM38O00635 465 aa18.56■□□□□ 0.56
VARS2-209ENST00000477288 MSI1O43347 362 aaKnown RBP18.56■□□□□ 0.56
VARS2-209ENST00000477288 GRM5P41594 1212 aa18.56■□□□□ 0.56
VARS2-209ENST00000477288 JAZF1Q86VZ6 243 aa18.56■□□□□ 0.56
VARS2-209ENST00000477288 SMG7Q92540 1137 aaKnown RBP18.56■□□□□ 0.56
VARS2-209ENST00000477288 SGK2Q9HBY8 427 aa18.56■□□□□ 0.56
VARS2-209ENST00000477288 PAGE1O75459 146 aa18.56■□□□□ 0.56
VARS2-209ENST00000477288 CBX5P45973 191 aa18.56■□□□□ 0.56
VARS2-209ENST00000477288 BCAP31P51572 246 aa18.56■□□□□ 0.56
VARS2-209ENST00000477288 ANXA8L1Q5VT79 327 aa18.56■□□□□ 0.56
VARS2-209ENST00000477288 AMIGO2Q86SJ2 522 aa18.56■□□□□ 0.56
VARS2-209ENST00000477288 TOP6BLQ8N6T0 577 aa18.56■□□□□ 0.56
VARS2-209ENST00000477288 BRINP2Q9C0B6 783 aa18.56■□□□□ 0.56
VARS2-209ENST00000477288 C3orf14Q9HBI5 128 aa18.56■□□□□ 0.56
VARS2-209ENST00000477288 PHPT1Q9NRX4 125 aaPredicted RBP18.56■□□□□ 0.56
VARS2-209ENST00000477288 SYNPO2Q9UMS6 1093 aa18.56■□□□□ 0.56
VARS2-209ENST00000477288 ING4Q9UNL4 249 aa18.56■□□□□ 0.56
VARS2-209ENST00000477288 CES1P23141 567 aa18.56■□□□□ 0.56
VARS2-209ENST00000477288 MATKP42679 507 aa18.56■□□□□ 0.56
VARS2-209ENST00000477288 SEMA5AQ13591 1074 aa18.56■□□□□ 0.56
VARS2-209ENST00000477288 DEC1Q9P2X7 70 aa18.56■□□□□ 0.56
VARS2-209ENST00000477288 NDRG2Q9UN36 371 aaKnown RBP18.56■□□□□ 0.56
VARS2-209ENST00000477288 IRAK3Q9Y616 596 aa18.56■□□□□ 0.56
VARS2-209ENST00000477288 ASTN1O14525 1302 aa18.56■□□□□ 0.56
VARS2-209ENST00000477288 PIAS1O75925 651 aa18.56■□□□□ 0.56
VARS2-209ENST00000477288 ITPKAP23677 461 aa18.56■□□□□ 0.56
VARS2-209ENST00000477288 SEC13P55735 322 aa18.56■□□□□ 0.56
VARS2-209ENST00000477288 MBTD1Q05BQ5 628 aa18.56■□□□□ 0.56
VARS2-209ENST00000477288 DENND5AQ6IQ26 1287 aa18.56■□□□□ 0.56
VARS2-209ENST00000477288 C17orf64Q86WR6 236 aa18.56■□□□□ 0.56
VARS2-209ENST00000477288 TNS4Q8IZW8 715 aa18.56■□□□□ 0.56
VARS2-209ENST00000477288 BAP1Q92560 729 aa18.56■□□□□ 0.56
VARS2-209ENST00000477288 ALKBH4Q9NXW9 302 aa18.56■□□□□ 0.56
VARS2-209ENST00000477288 CCDC162PA2VCL2 907 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms