RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 ADKP55263 362 aaKnown RBP7.33□□□□□ -1.24
BRCA1-214ENST00000477152 CLDN6P56747 220 aa7.33□□□□□ -1.24
BRCA1-214ENST00000477152 PFN3P60673 137 aa7.33□□□□□ -1.24
BRCA1-214ENST00000477152 RHOAP61586 193 aa7.33□□□□□ -1.24
BRCA1-214ENST00000477152 POLR2LP62875 67 aaKnown RBP7.33□□□□□ -1.24
BRCA1-214ENST00000477152 ARF5P84085 180 aa7.33□□□□□ -1.24
BRCA1-214ENST00000477152 CDR2Q01850 454 aa7.33□□□□□ -1.24
BRCA1-214ENST00000477152 FXNQ16595 210 aa7.33□□□□□ -1.24
BRCA1-214ENST00000477152 CDO1Q16878 200 aa7.33□□□□□ -1.24
BRCA1-214ENST00000477152 PARP15Q460N3 678 aa7.33□□□□□ -1.24
BRCA1-214ENST00000477152 ZNF542PQ5EBM4 170 aa7.33□□□□□ -1.24
BRCA1-214ENST00000477152 NAA35Q5VZE5 725 aa7.33□□□□□ -1.24
BRCA1-214ENST00000477152 ZNF662Q6ZS27 426 aa7.33□□□□□ -1.24
BRCA1-214ENST00000477152 SLFN11Q7Z7L1 901 aa7.33□□□□□ -1.24
BRCA1-214ENST00000477152 MRPL41Q8IXM3 137 aaKnown RBP7.33□□□□□ -1.24
BRCA1-214ENST00000477152 SLC22A18ASQ8N1D0 253 aa7.33□□□□□ -1.24
BRCA1-214ENST00000477152 NTAN1Q96AB6 310 aa7.33□□□□□ -1.24
BRCA1-214ENST00000477152 NAF1Q96HR8 494 aaKnown RBP7.33□□□□□ -1.24
BRCA1-214ENST00000477152 HIC2Q96JB3 615 aa7.33□□□□□ -1.24
BRCA1-214ENST00000477152 KLHL32Q96NJ5 620 aa7.33□□□□□ -1.24
BRCA1-214ENST00000477152 EIF3CQ99613 913 aaKnown RBP7.33□□□□□ -1.24
BRCA1-214ENST00000477152 BOCQ9BWV1 1114 aa7.33□□□□□ -1.24
BRCA1-214ENST00000477152 TTYH3Q9C0H2 523 aa7.33□□□□□ -1.24
BRCA1-214ENST00000477152 SYNDIG1Q9H7V2 258 aa7.33□□□□□ -1.24
BRCA1-214ENST00000477152 DNAI1Q9UI46 699 aa7.33□□□□□ -1.24
BRCA1-214ENST00000477152 TMEM59LQ9UK28 342 aa7.33□□□□□ -1.24
BRCA1-214ENST00000477152 PADI4Q9UM07 663 aa7.33□□□□□ -1.24
BRCA1-214ENST00000477152 SATB2Q9UPW6 733 aa7.33□□□□□ -1.24
BRCA1-214ENST00000477152 MFHAS1Q9Y4C4 1052 aa7.33□□□□□ -1.24
BRCA1-214ENST00000477152 PCDHB1Q9Y5F3 818 aa7.33□□□□□ -1.24
BRCA1-214ENST00000477152 J3QKU1 62 aa7.32□□□□□ -1.24
BRCA1-214ENST00000477152 FGF10O15520 208 aaPredicted RBP7.32□□□□□ -1.24
BRCA1-214ENST00000477152 GPD1P21695 349 aa7.32□□□□□ -1.24
BRCA1-214ENST00000477152 FLT3P36888 993 aa7.32□□□□□ -1.24
BRCA1-214ENST00000477152 NOMO3P69849 1222 aa7.32□□□□□ -1.24
BRCA1-214ENST00000477152 DEFB133Q30KQ1 61 aa7.32□□□□□ -1.24
BRCA1-214ENST00000477152 ARHGAP40Q5TG30 622 aa7.32□□□□□ -1.24
BRCA1-214ENST00000477152 ANKRD34AQ69YU3 496 aa7.32□□□□□ -1.24
BRCA1-214ENST00000477152 SPATC1Q76KD6 591 aa7.32□□□□□ -1.24
BRCA1-214ENST00000477152 VPS36Q86VN1 386 aa7.32□□□□□ -1.24
BRCA1-214ENST00000477152 DNAAF5Q86Y56 855 aa7.32□□□□□ -1.24
BRCA1-214ENST00000477152 LILRB2Q8N423 598 aa7.32□□□□□ -1.24
BRCA1-214ENST00000477152 ARL10Q8N8L6 244 aa7.32□□□□□ -1.24
BRCA1-214ENST00000477152 RXFP2Q8WXD0 754 aa7.32□□□□□ -1.24
BRCA1-214ENST00000477152 CPA5Q8WXQ8 436 aa7.32□□□□□ -1.24
BRCA1-214ENST00000477152 ZNF641Q96N77 438 aaPredicted RBP7.32□□□□□ -1.24
BRCA1-214ENST00000477152 SLC46A1Q96NT5 459 aa7.32□□□□□ -1.24
BRCA1-214ENST00000477152 GFM1Q96RP9 751 aaKnown RBP7.32□□□□□ -1.24
BRCA1-214ENST00000477152 CPEB1Q9BZB8 566 aaKnown RBP7.32□□□□□ -1.24
BRCA1-214ENST00000477152 SEMA6CQ9H3T2 930 aa7.32□□□□□ -1.24
BRCA1-214ENST00000477152 FHOD1Q9Y613 1164 aa7.32□□□□□ -1.24
BRCA1-214ENST00000477152 DSPP15924 2871 aaKnown RBP7.32□□□□□ -1.24
BRCA1-214ENST00000477152 ZFYVE26Q68DK2 2539 aa7.32□□□□□ -1.24
BRCA1-214ENST00000477152 A0A1W2PQ67 120 aa7.31□□□□□ -1.24
BRCA1-214ENST00000477152 CFAP69A5D8W1 941 aa7.31□□□□□ -1.24
BRCA1-214ENST00000477152 F8VZ95 297 aa7.31□□□□□ -1.24
BRCA1-214ENST00000477152 CACNB4O00305 520 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-214ENST00000477152 TNFRSF10CO14798 259 aa7.31□□□□□ -1.24
BRCA1-214ENST00000477152 MUSKO15146 869 aa7.31□□□□□ -1.24
BRCA1-214ENST00000477152 NEBLO76041 1014 aa7.31□□□□□ -1.24
BRCA1-214ENST00000477152 TP53P04637 393 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-214ENST00000477152 MMEP08473 750 aa7.31□□□□□ -1.24
BRCA1-214ENST00000477152 ITGA2BP08514 1039 aa7.31□□□□□ -1.24
BRCA1-214ENST00000477152 MMP8P22894 467 aa7.31□□□□□ -1.24
BRCA1-214ENST00000477152 EPHB2P29323 1055 aa7.31□□□□□ -1.24
BRCA1-214ENST00000477152 TCP11X2Q5H9J9 407 aa7.31□□□□□ -1.24
BRCA1-214ENST00000477152 OTUD1Q5VV17 481 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-214ENST00000477152 BRAT1Q6PJG6 821 aa7.31□□□□□ -1.24
BRCA1-214ENST00000477152 VHLLQ6RSH7 139 aa7.31□□□□□ -1.24
BRCA1-214ENST00000477152 BNIPLQ7Z465 357 aa7.31□□□□□ -1.24
BRCA1-214ENST00000477152 IRF2BP1Q8IU81 584 aa7.31□□□□□ -1.24
BRCA1-214ENST00000477152 FBXO39Q8N4B4 442 aa7.31□□□□□ -1.24
BRCA1-214ENST00000477152 RTL3Q8N8U3 475 aaKnown RBP7.31□□□□□ -1.24
BRCA1-214ENST00000477152 C19orf47Q8N9M1 422 aaKnown RBP7.31□□□□□ -1.24
BRCA1-214ENST00000477152 FAM172AQ8WUF8 416 aa7.31□□□□□ -1.24
BRCA1-214ENST00000477152 SNRNP27Q8WVK2 155 aaKnown RBP7.31□□□□□ -1.24
BRCA1-214ENST00000477152 CENPTQ96BT3 561 aa7.31□□□□□ -1.24
BRCA1-214ENST00000477152 MED8Q96G25 268 aa7.31□□□□□ -1.24
BRCA1-214ENST00000477152 LIN37Q96GY3 246 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-214ENST00000477152 MEGF10Q96KG7 1140 aa7.31□□□□□ -1.24
BRCA1-214ENST00000477152 TUBGCP5Q96RT8 1024 aa7.31□□□□□ -1.24
BRCA1-214ENST00000477152 CCDC3Q9BQI4 270 aa7.31□□□□□ -1.24
BRCA1-214ENST00000477152 EDEM3Q9BZQ6 932 aa7.31□□□□□ -1.24
BRCA1-214ENST00000477152 NUP62CLQ9H1M0 184 aa7.31□□□□□ -1.24
BRCA1-214ENST00000477152 ADAM22Q9P0K1 906 aa7.31□□□□□ -1.24
BRCA1-214ENST00000477152 GULP1Q9UBP9 304 aa7.31□□□□□ -1.24
BRCA1-214ENST00000477152 UBA2Q9UBT2 640 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-214ENST00000477152 PFDN2Q9UHV9 154 aa7.31□□□□□ -1.24
BRCA1-214ENST00000477152 ENTPD2Q9Y5L3 495 aa7.31□□□□□ -1.24
BRCA1-214ENST00000477152 HEMK1Q9Y5R4 338 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-214ENST00000477152 SNX10Q9Y5X0 201 aa7.31□□□□□ -1.24
BRCA1-214ENST00000477152 CHD5Q8TDI0 1954 aa7.31□□□□□ -1.24
BRCA1-214ENST00000477152 DMXL2Q8TDJ6 3036 aa7.31□□□□□ -1.24
BRCA1-214ENST00000477152 ARHGAP42A6NI28 874 aa7.31□□□□□ -1.24
BRCA1-214ENST00000477152 ZNF821O75541 412 aaPredicted RBP7.31□□□□□ -1.24
BRCA1-214ENST00000477152 GFPT2O94808 682 aa7.31□□□□□ -1.24
BRCA1-214ENST00000477152 TMCC1O94876 653 aa7.31□□□□□ -1.24
BRCA1-214ENST00000477152 LRIG2O94898 1065 aa7.31□□□□□ -1.24
BRCA1-214ENST00000477152 TNFSF15O95150 251 aa7.31□□□□□ -1.24
BRCA1-214ENST00000477152 CYP1A1P04798 512 aaPredicted RBP7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms